EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000005928 (Gene tree)
Gene ID: 112146607
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 888-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 2922 bases
Position: chrNVQA01000010.1:14190316-14193237
Accession: 112146607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000024976	zf-C2H2	PF00096.26	1.5e-14	1	2
ENSOMEP00000024976	zf-C2H2	PF00096.26	1.5e-14	2	2
ENSOMEP00000004936	zf-C2H2	PF00096.26	4.8e-14	1	2
ENSOMEP00000004936	zf-C2H2	PF00096.26	4.8e-14	2	2
ENSOMEP00000024976	zf-met	PF12874.7	4.5e-06	1	2
ENSOMEP00000024976	zf-met	PF12874.7	4.5e-06	2	2
ENSOMEP00000004936	zf-met	PF12874.7	5.6e-05	1	2
ENSOMEP00000004936	zf-met	PF12874.7	5.6e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000008324	-	1691	XM_024272504	ENSOMEP00000004936	427 (aa)	XP_024128272	UPI000CF80BB2
ENSOMET00000008311	-	1432	-	ENSOMEP00000024976	352 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000005928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000005928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000005928	-	59	50.000	ENSOMEG00000018262	-	83	44.872
ENSOMEG00000005928	-	65	45.070	ENSOMEG00000023652	-	97	45.070
ENSOMEG00000005928	-	84	43.478	ENSOMEG00000021518	-	94	43.478
ENSOMEG00000005928	-	56	44.928	ENSOMEG00000009440	-	81	54.717
ENSOMEG00000005928	-	71	42.754	ENSOMEG00000021998	-	54	42.754
ENSOMEG00000005928	-	70	43.885	ENSOMEG00000008445	-	81	43.151
ENSOMEG00000005928	-	64	37.681	ENSOMEG00000022915	-	78	48.148
ENSOMEG00000005928	-	63	39.130	ENSOMEG00000023744	-	91	43.210
ENSOMEG00000005928	-	84	40.559	ENSOMEG00000023331	-	87	40.667
ENSOMEG00000005928	-	84	43.478	ENSOMEG00000002268	-	85	43.478
ENSOMEG00000005928	-	61	38.462	ENSOMEG00000021134	-	51	38.621
ENSOMEG00000005928	-	54	40.580	ENSOMEG00000012539	-	84	46.269
ENSOMEG00000005928	-	56	40.678	ENSOMEG00000009071	-	94	40.678

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000005928	-	97	54.324	ENSATEG00000023773	-	95	54.102	Anabas_testudineus
ENSOMEG00000005928	-	98	45.475	ENSCSEG00000011817	-	96	45.254	Cynoglossus_semilaevis
ENSOMEG00000005928	-	53	41.053	ENSDARG00000114793	CU182823.4	78	41.053	Danio_rerio
ENSOMEG00000005928	-	54	39.130	ENSDARG00000091994	znf1048	89	39.130	Danio_rerio
ENSOMEG00000005928	-	53	41.053	ENSDARG00000102008	si:dkey-72l17.6	77	41.667	Danio_rerio
ENSOMEG00000005928	-	54	39.855	ENSDARG00000092938	znf1047	89	39.855	Danio_rerio
ENSOMEG00000005928	-	53	33.758	ENSDARG00000103721	si:dkey-122c11.7	81	40.157	Danio_rerio
ENSOMEG00000005928	-	61	41.830	ENSDARG00000089715	si:cabz01054394.7	77	49.438	Danio_rerio
ENSOMEG00000005928	-	60	34.545	ENSDARG00000105696	CABZ01021433.1	53	35.811	Danio_rerio
ENSOMEG00000005928	-	54	38.000	ENSDARG00000098986	znf1040	81	39.855	Danio_rerio
ENSOMEG00000005928	-	53	41.053	ENSDARG00000112103	si:dkey-16p19.1	80	41.667	Danio_rerio
ENSOMEG00000005928	-	60	32.243	ENSDARG00000113971	LO018181.1	59	39.161	Danio_rerio
ENSOMEG00000005928	-	58	40.940	ENSDARG00000091393	si:ch211-161m3.6	63	42.254	Danio_rerio
ENSOMEG00000005928	-	63	39.785	ENSDARG00000102561	AL645691.1	77	40.678	Danio_rerio
ENSOMEG00000005928	-	53	39.130	ENSDARG00000102600	CABZ01003344.1	89	39.130	Danio_rerio
ENSOMEG00000005928	-	99	50.658	ENSFHEG00000015400	-	97	50.658	Fundulus_heteroclitus
ENSOMEG00000005928	-	98	53.761	ENSGAFG00000013839	-	99	55.066	Gambusia_affinis
ENSOMEG00000005928	-	71	36.601	ENSKMAG00000011441	-	70	34.969	Kryptolebias_marmoratus
ENSOMEG00000005928	-	98	53.244	ENSMAMG00000020468	-	98	53.020	Mastacembelus_armatus
ENSOMEG00000005928	-	91	42.680	ENSNBRG00000019881	-	98	53.636	Neolamprologus_brichardi
ENSOMEG00000005928	-	69	60.148	ENSORLG00015013828	-	85	58.736	Oryzias_latipes_hsok
ENSOMEG00000005928	-	97	41.050	ENSPFOG00000005998	-	97	51.475	Poecilia_formosa
ENSOMEG00000005928	-	99	52.597	ENSPLAG00000001674	-	98	53.463	Poecilia_latipinna
ENSOMEG00000005928	-	58	40.000	ENSPLAG00000010547	-	54	40.000	Poecilia_latipinna
ENSOMEG00000005928	-	98	53.084	ENSPMEG00000013200	-	97	54.185	Poecilia_mexicana
ENSOMEG00000005928	-	72	41.509	ENSPREG00000005015	-	97	48.305	Poecilia_reticulata
ENSOMEG00000005928	-	98	54.139	ENSSMAG00000002598	-	99	54.139	Scophthalmus_maximus
ENSOMEG00000005928	-	97	55.965	ENSSDUG00000015456	-	96	56.182	Seriola_dumerili
ENSOMEG00000005928	-	98	57.238	ENSSPAG00000017203	-	96	57.238	Stegastes_partitus
ENSOMEG00000005928	-	57	42.029	ENSXETG00000031310	-	68	42.029	Xenopus_tropicalis
ENSOMEG00000005928	-	51	40.714	ENSXMAG00000024816	-	52	40.714	Xiphophorus_maculatus
ENSOMEG00000005928	-	98	54.565	ENSXMAG00000021195	-	97	54.783	Xiphophorus_maculatus