EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000005929 (Gene tree)
Gene ID: 112155993
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 12148 bases
Position: chrNVQA01000020.1:309114-321261
Accession: 112155993
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000004939	RRM_5	PF13893.6	1.2e-08	1	2
ENSOMEP00000004939	RRM_5	PF13893.6	1.2e-08	2	2
ENSOMEP00000004945	RRM_5	PF13893.6	2e-08	1	2
ENSOMEP00000004945	RRM_5	PF13893.6	2e-08	2	2
ENSOMEP00000004939	RRM_1	PF00076.22	1.4e-28	1	2
ENSOMEP00000004939	RRM_1	PF00076.22	1.4e-28	2	2
ENSOMEP00000004945	RRM_1	PF00076.22	1.4e-28	1	2
ENSOMEP00000004945	RRM_1	PF00076.22	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000008313	-	2065	-	ENSOMEP00000004939	345 (aa)	XP_024143868	UPI000CF812CB
ENSOMET00000008304	-	2067	-	ENSOMEP00000004945	347 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000005929's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000005929's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000005929	rbm4.3	100	91.501	ENSOMEG00000005918	rbm4.3	92	96.875
ENSOMEG00000005929	rbm4.3	80	51.656	ENSOMEG00000001001	rbm4.1	59	52.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000005929	rbm4.3	100	75.556	ENSAPOG00000002953	rbm4.3	97	75.000	Acanthochromis_polyacanthus
ENSOMEG00000005929	rbm4.3	99	59.605	ENSAPOG00000002991	rbm4.3	99	59.040	Acanthochromis_polyacanthus
ENSOMEG00000005929	rbm4.3	100	75.783	ENSACIG00000021311	-	97	76.401	Amphilophus_citrinellus
ENSOMEG00000005929	rbm4.3	96	60.000	ENSACIG00000021295	rbm4.3	96	59.710	Amphilophus_citrinellus
ENSOMEG00000005929	rbm4.3	100	74.444	ENSAOCG00000008015	rbm4.3	97	74.425	Amphiprion_ocellaris
ENSOMEG00000005929	rbm4.3	97	58.261	ENSAOCG00000007992	rbm4.3	96	57.681	Amphiprion_ocellaris
ENSOMEG00000005929	rbm4.3	100	75.278	ENSAPEG00000017324	rbm4.3	97	73.851	Amphiprion_percula
ENSOMEG00000005929	rbm4.3	97	58.261	ENSAPEG00000017288	rbm4.3	96	57.681	Amphiprion_percula
ENSOMEG00000005929	rbm4.3	99	60.227	ENSATEG00000019395	rbm4.3	99	59.312	Anabas_testudineus
ENSOMEG00000005929	rbm4.3	100	73.056	ENSATEG00000019375	rbm4.3	97	74.138	Anabas_testudineus
ENSOMEG00000005929	rbm4.3	97	59.249	ENSACLG00000010642	rbm4.3	96	58.261	Astatotilapia_calliptera
ENSOMEG00000005929	rbm4.3	100	76.353	ENSACLG00000010620	-	97	76.991	Astatotilapia_calliptera
ENSOMEG00000005929	rbm4.3	62	70.370	ENSAMXG00000040224	rbm4.3	82	68.269	Astyanax_mexicanus
ENSOMEG00000005929	rbm4.3	100	71.667	ENSCSEG00000013659	rbm4.3	97	71.264	Cynoglossus_semilaevis
ENSOMEG00000005929	rbm4.3	98	58.592	ENSCVAG00000008502	rbm4.3	97	57.803	Cyprinodon_variegatus
ENSOMEG00000005929	rbm4.3	100	76.068	ENSCVAG00000008508	rbm4.3	97	76.991	Cyprinodon_variegatus
ENSOMEG00000005929	rbm4.3	95	61.947	ENSDARG00000022129	rbm4.3	97	64.162	Danio_rerio
ENSOMEG00000005929	rbm4.3	99	67.867	ENSELUG00000022150	rbm4.3	97	64.387	Esox_lucius
ENSOMEG00000005929	rbm4.3	99	67.036	ENSELUG00000022155	rbm4.3	97	65.242	Esox_lucius
ENSOMEG00000005929	rbm4.3	100	57.143	ENSELUG00000022168	rbm4.3	97	58.807	Esox_lucius
ENSOMEG00000005929	rbm4.3	82	77.622	ENSFHEG00000023137	rbm4.3	86	76.950	Fundulus_heteroclitus
ENSOMEG00000005929	rbm4.3	100	56.354	ENSGAFG00000001935	rbm4.3	97	56.034	Gambusia_affinis
ENSOMEG00000005929	rbm4.3	96	59.195	ENSGACG00000019980	rbm4.3	95	58.621	Gasterosteus_aculeatus
ENSOMEG00000005929	rbm4.3	100	76.353	ENSHBUG00000009020	-	97	76.991	Haplochromis_burtoni
ENSOMEG00000005929	rbm4.3	97	59.538	ENSHBUG00000009051	rbm4.3	96	58.551	Haplochromis_burtoni
ENSOMEG00000005929	rbm4.3	95	69.527	ENSHCOG00000010349	rbm4.3	100	70.868	Hippocampus_comes
ENSOMEG00000005929	rbm4.3	97	60.114	ENSIPUG00000022943	RBM4B	97	58.757	Ictalurus_punctatus
ENSOMEG00000005929	rbm4.3	100	73.851	ENSKMAG00000017468	rbm4.3	97	73.810	Kryptolebias_marmoratus
ENSOMEG00000005929	rbm4.3	100	69.806	ENSLBEG00000001071	-	97	71.920	Labrus_bergylta
ENSOMEG00000005929	rbm4.3	54	65.426	ENSLBEG00000001025	rbm4.3	81	62.637	Labrus_bergylta
ENSOMEG00000005929	rbm4.3	95	55.707	ENSLOCG00000002755	rbm4.3	97	54.865	Lepisosteus_oculatus
ENSOMEG00000005929	rbm4.3	99	61.017	ENSMAMG00000004701	rbm4.3	99	60.452	Mastacembelus_armatus
ENSOMEG00000005929	rbm4.3	100	73.611	ENSMAMG00000004715	-	81	74.713	Mastacembelus_armatus
ENSOMEG00000005929	rbm4.3	100	72.934	ENSMZEG00005007417	-	97	73.451	Maylandia_zebra
ENSOMEG00000005929	rbm4.3	88	61.438	ENSMZEG00005007441	rbm4.3	79	60.328	Maylandia_zebra
ENSOMEG00000005929	rbm4.3	87	70.915	ENSMZEG00005028537	-	85	70.607	Maylandia_zebra
ENSOMEG00000005929	rbm4.3	97	59.249	ENSMZEG00005028540	rbm4.3	96	58.261	Maylandia_zebra
ENSOMEG00000005929	rbm4.3	97	60.231	ENSMMOG00000012191	rbm4.3	96	58.671	Mola_mola
ENSOMEG00000005929	rbm4.3	97	58.580	ENSMALG00000003032	rbm4.3	93	59.494	Monopterus_albus
ENSOMEG00000005929	rbm4.3	90	72.327	ENSMALG00000003001	rbm4.3	87	75.570	Monopterus_albus
ENSOMEG00000005929	rbm4.3	99	58.757	ENSMALG00000015014	-	89	59.688	Monopterus_albus
ENSOMEG00000005929	rbm4.3	97	58.960	ENSNBRG00000012372	rbm4.3	96	57.971	Neolamprologus_brichardi
ENSOMEG00000005929	rbm4.3	100	76.353	ENSONIG00000018380	-	97	76.991	Oreochromis_niloticus
ENSOMEG00000005929	rbm4.3	97	58.286	ENSONIG00000018378	rbm4.3	96	57.349	Oreochromis_niloticus
ENSOMEG00000005929	rbm4.3	100	94.783	ENSORLG00000011589	rbm4.3	100	94.783	Oryzias_latipes
ENSOMEG00000005929	rbm4.3	100	89.914	ENSORLG00000012473	rbm4.3	100	88.473	Oryzias_latipes
ENSOMEG00000005929	rbm4.3	96	53.913	ENSORLG00000024749	rbm4.3	96	50.142	Oryzias_latipes
ENSOMEG00000005929	rbm4.3	100	89.914	ENSORLG00020012464	rbm4.3	100	88.473	Oryzias_latipes_hni
ENSOMEG00000005929	rbm4.3	100	94.783	ENSORLG00020012474	rbm4.3	100	94.783	Oryzias_latipes_hni
ENSOMEG00000005929	rbm4.3	99	54.342	ENSORLG00020012482	rbm4.3	99	52.078	Oryzias_latipes_hni
ENSOMEG00000005929	rbm4.3	97	53.602	ENSORLG00015013721	rbm4.3	96	50.142	Oryzias_latipes_hsok
ENSOMEG00000005929	rbm4.3	100	95.072	ENSORLG00015013698	rbm4.3	100	94.783	Oryzias_latipes_hsok
ENSOMEG00000005929	rbm4.3	100	89.914	ENSORLG00015013686	rbm4.3	100	88.473	Oryzias_latipes_hsok
ENSOMEG00000005929	rbm4.3	92	65.538	ENSPKIG00000007001	rbm4.3	97	60.174	Paramormyrops_kingsleyae
ENSOMEG00000005929	rbm4.3	97	58.807	ENSPLAG00000006077	rbm4.3	97	57.184	Poecilia_latipinna
ENSOMEG00000005929	rbm4.3	100	74.444	ENSPLAG00000006131	rbm4.3	97	74.425	Poecilia_latipinna
ENSOMEG00000005929	rbm4.3	100	78.348	ENSPMEG00000024263	rbm4.3	97	78.171	Poecilia_mexicana
ENSOMEG00000005929	rbm4.3	97	58.689	ENSPMEG00000024260	rbm4.3	97	56.772	Poecilia_mexicana
ENSOMEG00000005929	rbm4.3	100	74.167	ENSPMEG00000024271	rbm4.3	97	74.425	Poecilia_mexicana
ENSOMEG00000005929	rbm4.3	100	70.195	ENSPREG00000002156	rbm4.3	97	69.741	Poecilia_reticulata
ENSOMEG00000005929	rbm4.3	99	59.066	ENSPREG00000002093	-	99	59.384	Poecilia_reticulata
ENSOMEG00000005929	rbm4.3	100	76.353	ENSPNYG00000018541	rbm4.3	97	76.991	Pundamilia_nyererei
ENSOMEG00000005929	rbm4.3	97	58.790	ENSPNYG00000018564	rbm4.3	96	57.849	Pundamilia_nyererei
ENSOMEG00000005929	rbm4.3	100	61.081	ENSPNAG00000013053	rbm4.3	97	60.615	Pygocentrus_nattereri
ENSOMEG00000005929	rbm4.3	100	61.022	ENSSFOG00015015563	rbm4.3	100	59.409	Scleropages_formosus
ENSOMEG00000005929	rbm4.3	96	56.560	ENSSMAG00000013653	rbm4.3	96	55.394	Scophthalmus_maximus
ENSOMEG00000005929	rbm4.3	100	74.722	ENSSMAG00000013644	rbm4.3	97	73.276	Scophthalmus_maximus
ENSOMEG00000005929	rbm4.3	100	72.500	ENSSDUG00000018435	rbm4.3	97	74.138	Seriola_dumerili
ENSOMEG00000005929	rbm4.3	97	59.366	ENSSDUG00000018422	rbm4.3	96	56.647	Seriola_dumerili
ENSOMEG00000005929	rbm4.3	96	59.538	ENSSLDG00000017182	rbm4.3	96	56.522	Seriola_lalandi_dorsalis
ENSOMEG00000005929	rbm4.3	100	72.500	ENSSLDG00000017204	rbm4.3	97	74.138	Seriola_lalandi_dorsalis
ENSOMEG00000005929	rbm4.3	99	57.627	ENSSPAG00000008041	rbm4.3	84	56.780	Stegastes_partitus
ENSOMEG00000005929	rbm4.3	100	75.278	ENSSPAG00000008062	rbm4.3	97	74.640	Stegastes_partitus
ENSOMEG00000005929	rbm4.3	97	57.803	ENSTRUG00000023874	rbm4.3	96	57.391	Takifugu_rubripes
ENSOMEG00000005929	rbm4.3	100	74.930	ENSTRUG00000020901	rbm4.3	97	75.793	Takifugu_rubripes
ENSOMEG00000005929	rbm4.3	100	71.866	ENSTNIG00000005668	rbm4.3	97	72.622	Tetraodon_nigroviridis
ENSOMEG00000005929	rbm4.3	100	58.011	ENSXCOG00000005996	rbm4.3	99	59.167	Xiphophorus_couchianus
ENSOMEG00000005929	rbm4.3	100	78.632	ENSXCOG00000006001	rbm4.3	97	78.466	Xiphophorus_couchianus
ENSOMEG00000005929	rbm4.3	100	78.632	ENSXMAG00000021997	rbm4.3	97	78.466	Xiphophorus_maculatus
ENSOMEG00000005929	rbm4.3	97	58.621	ENSXMAG00000025173	rbm4.3	97	58.046	Xiphophorus_maculatus
ENSOMEG00000005929	rbm4.3	100	73.889	ENSXMAG00000011698	rbm4.3	97	73.851	Xiphophorus_maculatus