EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000006130 (Gene tree)
Gene ID: 112149984
Gene Symbol: tbrg1
Alias: -
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 12259 bases
Position: chrNVQA01000013.1:1376635-1388893
Accession: 112149984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005147	HARE-HTH	PF05066.13	1.4e-15	1	1
ENSOMEP00000025092	HARE-HTH	PF05066.13	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000007963	-	7021	-	ENSOMEP00000005147	543 (aa)	XP_024133786	UPI000CF7BF15
ENSOMET00000008001	-	6886	-	ENSOMEP00000025092	543 (aa)	XP_024133786	UPI000CF7BF15

Gene Model

Click here to download ENSOMEG00000006130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006130	tbrg1	100	86.239	ENSAPOG00000017352	tbrg1	100	86.239	Acanthochromis_polyacanthus
ENSOMEG00000006130	tbrg1	92	82.937	ENSACIG00000021274	tbrg1	94	82.937	Amphilophus_citrinellus
ENSOMEG00000006130	tbrg1	100	85.872	ENSAOCG00000018605	tbrg1	100	85.872	Amphiprion_ocellaris
ENSOMEG00000006130	tbrg1	100	85.872	ENSAPEG00000022443	tbrg1	100	85.872	Amphiprion_percula
ENSOMEG00000006130	tbrg1	100	85.321	ENSATEG00000023537	tbrg1	100	85.321	Anabas_testudineus
ENSOMEG00000006130	tbrg1	100	85.321	ENSACLG00000000281	tbrg1	100	85.321	Astatotilapia_calliptera
ENSOMEG00000006130	tbrg1	100	69.801	ENSAMXG00000008381	tbrg1	99	68.953	Astyanax_mexicanus
ENSOMEG00000006130	tbrg1	100	81.101	ENSCSEG00000002445	tbrg1	100	80.367	Cynoglossus_semilaevis
ENSOMEG00000006130	tbrg1	100	77.858	ENSCVAG00000019626	tbrg1	100	79.091	Cyprinodon_variegatus
ENSOMEG00000006130	tbrg1	98	70.577	ENSDARG00000074996	tbrg1	97	70.950	Danio_rerio
ENSOMEG00000006130	tbrg1	91	49.706	ENSEBUG00000014060	tbrg1	90	49.310	Eptatretus_burgeri
ENSOMEG00000006130	tbrg1	99	75.458	ENSELUG00000017458	tbrg1	99	74.908	Esox_lucius
ENSOMEG00000006130	tbrg1	88	76.268	ENSFHEG00000004283	tbrg1	92	76.268	Fundulus_heteroclitus
ENSOMEG00000006130	tbrg1	100	79.235	ENSGAFG00000000204	tbrg1	100	80.146	Gambusia_affinis
ENSOMEG00000006130	tbrg1	100	85.321	ENSHBUG00000004935	tbrg1	100	85.321	Haplochromis_burtoni
ENSOMEG00000006130	tbrg1	100	75.588	ENSHCOG00000010588	tbrg1	100	75.588	Hippocampus_comes
ENSOMEG00000006130	tbrg1	92	73.413	ENSIPUG00000008697	tbrg1	93	73.593	Ictalurus_punctatus
ENSOMEG00000006130	tbrg1	100	84.799	ENSKMAG00000002775	tbrg1	100	84.799	Kryptolebias_marmoratus
ENSOMEG00000006130	tbrg1	99	83.272	ENSLBEG00000017559	tbrg1	95	83.529	Labrus_bergylta
ENSOMEG00000006130	tbrg1	99	71.747	ENSLOCG00000003093	tbrg1	98	71.455	Lepisosteus_oculatus
ENSOMEG00000006130	tbrg1	100	84.587	ENSMAMG00000000876	tbrg1	100	84.587	Mastacembelus_armatus
ENSOMEG00000006130	tbrg1	100	85.138	ENSMZEG00005013545	tbrg1	92	85.138	Maylandia_zebra
ENSOMEG00000006130	tbrg1	94	78.627	ENSMMOG00000005314	tbrg1	93	78.431	Mola_mola
ENSOMEG00000006130	tbrg1	94	85.323	ENSMALG00000011630	tbrg1	99	85.323	Monopterus_albus
ENSOMEG00000006130	tbrg1	98	83.925	ENSNBRG00000017490	tbrg1	100	83.925	Neolamprologus_brichardi
ENSOMEG00000006130	tbrg1	100	85.688	ENSONIG00000005284	tbrg1	100	85.688	Oreochromis_niloticus
ENSOMEG00000006130	tbrg1	100	93.211	ENSORLG00000014519	tbrg1	100	93.211	Oryzias_latipes
ENSOMEG00000006130	tbrg1	100	92.477	ENSORLG00020009567	tbrg1	100	92.477	Oryzias_latipes_hni
ENSOMEG00000006130	tbrg1	100	92.844	ENSORLG00015000448	tbrg1	100	92.844	Oryzias_latipes_hsok
ENSOMEG00000006130	tbrg1	95	72.534	ENSPKIG00000012274	tbrg1	90	72.467	Paramormyrops_kingsleyae
ENSOMEG00000006130	tbrg1	100	75.949	ENSPMGG00000015968	tbrg1	100	75.949	Periophthalmus_magnuspinnatus
ENSOMEG00000006130	tbrg1	100	79.235	ENSPFOG00000004279	tbrg1	100	80.146	Poecilia_formosa
ENSOMEG00000006130	tbrg1	100	79.417	ENSPLAG00000001227	tbrg1	100	80.328	Poecilia_latipinna
ENSOMEG00000006130	tbrg1	100	79.053	ENSPMEG00000000955	tbrg1	100	79.964	Poecilia_mexicana
ENSOMEG00000006130	tbrg1	100	78.689	ENSPREG00000005246	tbrg1	100	79.599	Poecilia_reticulata
ENSOMEG00000006130	tbrg1	87	85.115	ENSPNYG00000012625	tbrg1	100	85.115	Pundamilia_nyererei
ENSOMEG00000006130	tbrg1	98	69.414	ENSPNAG00000028332	tbrg1	99	69.231	Pygocentrus_nattereri
ENSOMEG00000006130	tbrg1	92	74.162	ENSSFOG00015009308	tbrg1	99	67.177	Scleropages_formosus
ENSOMEG00000006130	tbrg1	100	81.319	ENSSMAG00000002529	tbrg1	100	81.685	Scophthalmus_maximus
ENSOMEG00000006130	tbrg1	99	86.397	ENSSDUG00000013674	tbrg1	99	86.397	Seriola_dumerili
ENSOMEG00000006130	tbrg1	93	85.156	ENSSLDG00000008932	tbrg1	98	85.156	Seriola_lalandi_dorsalis
ENSOMEG00000006130	tbrg1	86	85.653	ENSSPAG00000004808	tbrg1	99	85.011	Stegastes_partitus
ENSOMEG00000006130	tbrg1	95	77.756	ENSTRUG00000005960	tbrg1	98	77.369	Takifugu_rubripes
ENSOMEG00000006130	tbrg1	100	80.692	ENSXMAG00000001551	tbrg1	100	80.692	Xiphophorus_maculatus