EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000006172 (Gene tree)
Gene ID: 112147230
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 11-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 8998 bases
Position: chrNVQA01000011.1:5475199-5484196
Accession: 112147230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005183	RRM_1	PF00076.22	7.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000007911	-	1890	-	ENSOMEP00000005183	450 (aa)	XP_024129226	UPI000CF8176F

Gene Model

Click here to download ENSOMEG00000006172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000006172	-	100	61.996	ENSOMEG00000022450	srsf11	100	69.280

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006172	-	100	82.819	ENSAPOG00000004488	-	100	82.819	Acanthochromis_polyacanthus
ENSOMEG00000006172	-	56	52.239	ENSAMEG00000011327	SREK1	96	44.706	Ailuropoda_melanoleuca
ENSOMEG00000006172	-	87	74.046	ENSACIG00000018075	-	79	97.647	Amphilophus_citrinellus
ENSOMEG00000006172	-	81	33.103	ENSAOCG00000024379	srek1	96	33.563	Amphiprion_ocellaris
ENSOMEG00000006172	-	100	82.819	ENSAPEG00000003619	SRSF11	100	82.819	Amphiprion_percula
ENSOMEG00000006172	-	100	86.062	ENSATEG00000007534	-	100	85.398	Anabas_testudineus
ENSOMEG00000006172	-	99	61.123	ENSACAG00000013654	SRSF11	99	68.898	Anolis_carolinensis
ENSOMEG00000006172	-	100	81.678	ENSACLG00000019647	-	100	84.547	Astatotilapia_calliptera
ENSOMEG00000006172	-	100	67.304	ENSAMXG00000008655	-	100	69.723	Astyanax_mexicanus
ENSOMEG00000006172	-	97	72.566	ENSCSEG00000010721	-	100	75.647	Cynoglossus_semilaevis
ENSOMEG00000006172	-	100	87.665	ENSCVAG00000006934	-	100	88.326	Cyprinodon_variegatus
ENSOMEG00000006172	-	100	61.853	ENSCVAG00000010634	-	100	64.516	Cyprinodon_variegatus
ENSOMEG00000006172	-	94	35.271	ENSDARG00000009764	srek1	54	41.577	Danio_rerio
ENSOMEG00000006172	-	52	65.737	ENSEASG00005007847	SRSF11	77	75.000	Equus_asinus_asinus
ENSOMEG00000006172	-	100	68.487	ENSELUG00000021268	-	100	64.693	Esox_lucius
ENSOMEG00000006172	-	99	59.414	ENSELUG00000023887	srsf11	99	65.073	Esox_lucius
ENSOMEG00000006172	-	100	81.128	ENSFHEG00000013348	-	100	85.900	Fundulus_heteroclitus
ENSOMEG00000006172	-	100	67.308	ENSFHEG00000003732	SRSF11	100	65.812	Fundulus_heteroclitus
ENSOMEG00000006172	-	100	72.527	ENSGMOG00000002255	-	99	73.742	Gadus_morhua
ENSOMEG00000006172	-	100	59.958	ENSGMOG00000015896	srsf11	100	65.828	Gadus_morhua
ENSOMEG00000006172	-	100	87.225	ENSGAFG00000021415	SRSF11	85	87.885	Gambusia_affinis
ENSOMEG00000006172	-	100	77.124	ENSGACG00000017855	-	99	77.273	Gasterosteus_aculeatus
ENSOMEG00000006172	-	63	42.005	ENSGAGG00000006087	SREK1	62	71.605	Gopherus_agassizii
ENSOMEG00000006172	-	100	81.898	ENSHBUG00000007092	-	99	84.655	Haplochromis_burtoni
ENSOMEG00000006172	-	99	60.944	ENSHGLG00000008682	SRSF11	95	67.457	Heterocephalus_glaber_female
ENSOMEG00000006172	-	99	60.730	ENSHGLG00100018382	SRSF11	99	67.532	Heterocephalus_glaber_male
ENSOMEG00000006172	-	66	74.582	ENSHCOG00000019035	-	90	73.020	Hippocampus_comes
ENSOMEG00000006172	-	94	39.147	ENSIPUG00000016851	srek1	54	43.165	Ictalurus_punctatus
ENSOMEG00000006172	-	100	59.072	ENSIPUG00000010929	-	97	68.657	Ictalurus_punctatus
ENSOMEG00000006172	-	100	86.564	ENSKMAG00000005868	-	100	85.683	Kryptolebias_marmoratus
ENSOMEG00000006172	-	72	83.540	ENSLBEG00000012466	-	74	81.988	Labrus_bergylta
ENSOMEG00000006172	-	100	62.128	ENSLBEG00000024167	srsf11	87	89.412	Labrus_bergylta
ENSOMEG00000006172	-	99	62.474	ENSLOCG00000009617	srsf11	100	68.410	Lepisosteus_oculatus
ENSOMEG00000006172	-	99	65.011	ENSLAFG00000015882	SRSF11	95	66.161	Loxodonta_africana
ENSOMEG00000006172	-	100	84.071	ENSMAMG00000015002	-	100	85.398	Mastacembelus_armatus
ENSOMEG00000006172	-	100	81.678	ENSMZEG00005025071	-	100	84.547	Maylandia_zebra
ENSOMEG00000006172	-	99	72.991	ENSMMOG00000016751	-	98	79.372	Mola_mola
ENSOMEG00000006172	-	100	78.462	ENSMALG00000020833	-	100	79.341	Monopterus_albus
ENSOMEG00000006172	-	99	59.524	ENSMLUG00000026338	-	94	59.740	Myotis_lucifugus
ENSOMEG00000006172	-	100	83.223	ENSNBRG00000012193	-	100	84.768	Neolamprologus_brichardi
ENSOMEG00000006172	-	64	38.072	ENSONIG00000011080	srek1	79	37.574	Oreochromis_niloticus
ENSOMEG00000006172	-	100	83.664	ENSONIG00000009591	-	100	83.664	Oreochromis_niloticus
ENSOMEG00000006172	-	56	35.928	ENSOANG00000005029	SREK1	53	39.837	Ornithorhynchus_anatinus
ENSOMEG00000006172	-	99	60.606	ENSOCUG00000024114	-	96	61.123	Oryctolagus_cuniculus
ENSOMEG00000006172	-	99	61.207	ENSOCUG00000025440	-	96	60.991	Oryctolagus_cuniculus
ENSOMEG00000006172	-	100	64.240	ENSORLG00000007753	srsf11	100	69.872	Oryzias_latipes
ENSOMEG00000006172	-	100	64.392	ENSORLG00020016204	srsf11	100	69.362	Oryzias_latipes_hni
ENSOMEG00000006172	-	87	95.641	ENSORLG00020009393	-	98	95.641	Oryzias_latipes_hni
ENSOMEG00000006172	-	100	64.819	ENSORLG00015011944	srsf11	100	69.787	Oryzias_latipes_hsok
ENSOMEG00000006172	-	87	95.641	ENSORLG00015009374	-	98	95.641	Oryzias_latipes_hsok
ENSOMEG00000006172	-	84	38.462	ENSPKIG00000025563	srek1	55	44.251	Paramormyrops_kingsleyae
ENSOMEG00000006172	-	99	65.817	ENSPCIG00000002083	SRSF11	92	67.387	Phascolarctos_cinereus
ENSOMEG00000006172	-	100	85.242	ENSPFOG00000014895	-	100	86.344	Poecilia_formosa
ENSOMEG00000006172	-	100	85.463	ENSPLAG00000009484	-	100	86.564	Poecilia_latipinna
ENSOMEG00000006172	-	100	87.004	ENSPMEG00000023453	-	100	87.665	Poecilia_mexicana
ENSOMEG00000006172	-	100	85.242	ENSPREG00000009065	SRSF11	100	86.344	Poecilia_reticulata
ENSOMEG00000006172	-	100	81.678	ENSPNYG00000014732	-	100	82.340	Pundamilia_nyererei
ENSOMEG00000006172	-	99	65.605	ENSSHAG00000012111	SRSF11	98	67.171	Sarcophilus_harrisii
ENSOMEG00000006172	-	89	36.667	ENSSFOG00015004995	srek1	53	43.007	Scleropages_formosus
ENSOMEG00000006172	-	100	68.008	ENSSFOG00015014887	srsf11	100	67.442	Scleropages_formosus
ENSOMEG00000006172	-	100	80.963	ENSSMAG00000019897	-	100	78.337	Scophthalmus_maximus
ENSOMEG00000006172	-	80	37.307	ENSSMAG00000011808	srek1	58	42.754	Scophthalmus_maximus
ENSOMEG00000006172	-	100	76.703	ENSSDUG00000018738	-	100	81.099	Seriola_dumerili
ENSOMEG00000006172	-	86	74.809	ENSSLDG00000012105	-	97	81.425	Seriola_lalandi_dorsalis
ENSOMEG00000006172	-	100	83.480	ENSSPAG00000016483	-	100	84.361	Stegastes_partitus
ENSOMEG00000006172	-	68	38.734	ENSTNIG00000013463	srek1	71	42.049	Tetraodon_nigroviridis
ENSOMEG00000006172	-	100	85.463	ENSXMAG00000019180	SRSF11	100	86.564	Xiphophorus_maculatus