EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000006184 (Gene tree)
Gene ID: 112154195
Gene Symbol: lsm12b
Alias: -
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 13151 bases
Position: chrNVQA01000018.1:14331458-14344608
Accession: 112154195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005196	AD	PF09793.9	4.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000007883	-	5363	-	ENSOMEP00000005196	214 (aa)	XP_024140735	UPI000CF7E07C

Gene Model

Click here to download ENSOMEG00000006184's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006184's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006184	lsm12b	92	85.204	ENSG00000161654	LSM12	100	85.204	Homo_sapiens
ENSOMEG00000006184	lsm12b	92	98.469	ENSAPOG00000007907	lsm12b	100	98.469	Acanthochromis_polyacanthus
ENSOMEG00000006184	lsm12b	92	83.417	ENSAMEG00000018321	LSM12	100	83.417	Ailuropoda_melanoleuca
ENSOMEG00000006184	lsm12b	92	96.939	ENSACIG00000008538	lsm12b	100	96.939	Amphilophus_citrinellus
ENSOMEG00000006184	lsm12b	95	99.020	ENSAOCG00000021847	lsm12b	91	99.020	Amphiprion_ocellaris
ENSOMEG00000006184	lsm12b	92	98.980	ENSAPEG00000002252	lsm12b	100	98.980	Amphiprion_percula
ENSOMEG00000006184	lsm12b	92	98.469	ENSATEG00000005705	lsm12b	100	98.469	Anabas_testudineus
ENSOMEG00000006184	lsm12b	92	84.184	ENSACAG00000004618	LSM12	100	84.184	Anolis_carolinensis
ENSOMEG00000006184	lsm12b	92	85.204	ENSANAG00000029011	LSM12	100	85.204	Aotus_nancymaae
ENSOMEG00000006184	lsm12b	92	97.449	ENSACLG00000026332	lsm12b	100	97.449	Astatotilapia_calliptera
ENSOMEG00000006184	lsm12b	98	82.775	ENSAMXG00000036117	lsm12a	94	82.775	Astyanax_mexicanus
ENSOMEG00000006184	lsm12b	92	93.878	ENSAMXG00000032952	lsm12b	100	93.878	Astyanax_mexicanus
ENSOMEG00000006184	lsm12b	92	85.204	ENSBTAG00000016252	LSM12	100	85.204	Bos_taurus
ENSOMEG00000006184	lsm12b	92	85.204	ENSCJAG00000048480	LSM12	100	85.204	Callithrix_jacchus
ENSOMEG00000006184	lsm12b	92	85.279	ENSCAFG00000014379	LSM12	92	85.279	Canis_familiaris
ENSOMEG00000006184	lsm12b	92	85.204	ENSCAFG00020012173	LSM12	100	85.204	Canis_lupus_dingo
ENSOMEG00000006184	lsm12b	92	85.204	ENSCHIG00000018175	LSM12	100	85.204	Capra_hircus
ENSOMEG00000006184	lsm12b	92	85.204	ENSTSYG00000036361	LSM12	100	85.204	Carlito_syrichta
ENSOMEG00000006184	lsm12b	76	81.481	ENSCAPG00000009647	LSM12	89	81.481	Cavia_aperea
ENSOMEG00000006184	lsm12b	92	84.694	ENSCPOG00000012860	LSM12	100	84.694	Cavia_porcellus
ENSOMEG00000006184	lsm12b	92	85.204	ENSCCAG00000032905	LSM12	100	85.204	Cebus_capucinus
ENSOMEG00000006184	lsm12b	92	85.204	ENSCATG00000030577	-	100	85.204	Cercocebus_atys
ENSOMEG00000006184	lsm12b	92	85.204	ENSCLAG00000015759	LSM12	100	85.204	Chinchilla_lanigera
ENSOMEG00000006184	lsm12b	92	85.714	ENSCSAG00000003486	LSM12	100	85.714	Chlorocebus_sabaeus
ENSOMEG00000006184	lsm12b	51	85.321	ENSCHOG00000001198	LSM12	100	85.321	Choloepus_hoffmanni
ENSOMEG00000006184	lsm12b	92	85.714	ENSCPBG00000027105	LSM12	100	85.714	Chrysemys_picta_bellii
ENSOMEG00000006184	lsm12b	92	85.204	ENSCANG00000043328	LSM12	100	85.204	Colobus_angolensis_palliatus
ENSOMEG00000006184	lsm12b	92	85.204	ENSCGRG00001002094	Lsm12	100	85.204	Cricetulus_griseus_chok1gshd
ENSOMEG00000006184	lsm12b	81	77.011	ENSCGRG00000004316	Lsm12	98	77.011	Cricetulus_griseus_crigri
ENSOMEG00000006184	lsm12b	92	98.469	ENSCSEG00000008434	lsm12b	100	98.469	Cynoglossus_semilaevis
ENSOMEG00000006184	lsm12b	92	96.939	ENSCVAG00000008755	lsm12b	100	96.939	Cyprinodon_variegatus
ENSOMEG00000006184	lsm12b	92	94.898	ENSDARG00000109510	lsm12b	100	94.898	Danio_rerio
ENSOMEG00000006184	lsm12b	92	86.735	ENSDARG00000028848	lsm12a	100	86.735	Danio_rerio
ENSOMEG00000006184	lsm12b	92	85.279	ENSDNOG00000002418	LSM12	92	85.279	Dasypus_novemcinctus
ENSOMEG00000006184	lsm12b	92	85.204	ENSDORG00000016381	Lsm12	100	85.204	Dipodomys_ordii
ENSOMEG00000006184	lsm12b	76	33.735	FBgn0030364	Lsm12	76	33.735	Drosophila_melanogaster
ENSOMEG00000006184	lsm12b	66	33.333	FBgn0036057	CG14164	82	33.333	Drosophila_melanogaster
ENSOMEG00000006184	lsm12b	92	84.694	ENSETEG00000008374	LSM12	100	84.694	Echinops_telfairi
ENSOMEG00000006184	lsm12b	81	75.723	ENSETEG00000011012	-	99	75.723	Echinops_telfairi
ENSOMEG00000006184	lsm12b	78	67.066	ENSEBUG00000016299	lsm12a	92	67.066	Eptatretus_burgeri
ENSOMEG00000006184	lsm12b	92	85.204	ENSEASG00005010155	LSM12	100	85.204	Equus_asinus_asinus
ENSOMEG00000006184	lsm12b	92	85.204	ENSECAG00000009071	LSM12	100	85.204	Equus_caballus
ENSOMEG00000006184	lsm12b	71	84.967	ENSEEUG00000002419	-	100	84.967	Erinaceus_europaeus
ENSOMEG00000006184	lsm12b	96	94.175	ENSELUG00000015538	lsm12b	97	94.175	Esox_lucius
ENSOMEG00000006184	lsm12b	92	92.347	ENSELUG00000000256	-	100	92.347	Esox_lucius
ENSOMEG00000006184	lsm12b	92	85.204	ENSFCAG00000037021	LSM12	100	85.204	Felis_catus
ENSOMEG00000006184	lsm12b	73	81.410	ENSFDAG00000008954	LSM12	91	81.410	Fukomys_damarensis
ENSOMEG00000006184	lsm12b	92	96.939	ENSFHEG00000019913	lsm12b	100	96.939	Fundulus_heteroclitus
ENSOMEG00000006184	lsm12b	74	97.468	ENSGMOG00000015449	lsm12b	100	97.468	Gadus_morhua
ENSOMEG00000006184	lsm12b	71	85.621	ENSGALG00000039803	LSM12	100	85.621	Gallus_gallus
ENSOMEG00000006184	lsm12b	92	96.939	ENSGAFG00000011829	lsm12b	100	96.939	Gambusia_affinis
ENSOMEG00000006184	lsm12b	74	98.101	ENSGACG00000003428	lsm12b	100	98.101	Gasterosteus_aculeatus
ENSOMEG00000006184	lsm12b	92	84.694	ENSGAGG00000021965	LSM12	100	84.694	Gopherus_agassizii
ENSOMEG00000006184	lsm12b	92	85.204	ENSGGOG00000010589	-	100	85.204	Gorilla_gorilla
ENSOMEG00000006184	lsm12b	78	97.605	ENSHBUG00000007667	lsm12b	74	97.605	Haplochromis_burtoni
ENSOMEG00000006184	lsm12b	92	85.204	ENSHGLG00000011411	LSM12	100	85.204	Heterocephalus_glaber_female
ENSOMEG00000006184	lsm12b	72	84.416	ENSHGLG00100000241	LSM12	82	84.416	Heterocephalus_glaber_male
ENSOMEG00000006184	lsm12b	92	95.408	ENSHCOG00000002094	lsm12b	100	95.408	Hippocampus_comes
ENSOMEG00000006184	lsm12b	92	94.388	ENSIPUG00000014800	lsm12	100	94.388	Ictalurus_punctatus
ENSOMEG00000006184	lsm12b	91	84.021	ENSIPUG00000008936	lsm12a	99	84.021	Ictalurus_punctatus
ENSOMEG00000006184	lsm12b	92	85.204	ENSSTOG00000007403	LSM12	100	85.204	Ictidomys_tridecemlineatus
ENSOMEG00000006184	lsm12b	88	75.789	ENSJJAG00000011793	-	100	75.789	Jaculus_jaculus
ENSOMEG00000006184	lsm12b	92	84.184	ENSJJAG00000004364	-	100	84.545	Jaculus_jaculus
ENSOMEG00000006184	lsm12b	73	73.585	ENSJJAG00000014652	-	95	73.585	Jaculus_jaculus
ENSOMEG00000006184	lsm12b	78	97.006	ENSKMAG00000007704	lsm12b	56	97.006	Kryptolebias_marmoratus
ENSOMEG00000006184	lsm12b	92	98.980	ENSLBEG00000027999	lsm12b	100	98.980	Labrus_bergylta
ENSOMEG00000006184	lsm12b	92	88.776	ENSLACG00000015981	LSM12	100	88.776	Latimeria_chalumnae
ENSOMEG00000006184	lsm12b	92	92.386	ENSLOCG00000013079	lsm12b	100	92.386	Lepisosteus_oculatus
ENSOMEG00000006184	lsm12b	92	85.204	ENSLAFG00000005202	LSM12	100	85.204	Loxodonta_africana
ENSOMEG00000006184	lsm12b	92	85.204	ENSMFAG00000031376	LSM12	100	85.204	Macaca_fascicularis
ENSOMEG00000006184	lsm12b	60	73.563	ENSMMUG00000042106	-	100	73.563	Macaca_mulatta
ENSOMEG00000006184	lsm12b	92	85.204	ENSMMUG00000006804	LSM12	100	85.204	Macaca_mulatta
ENSOMEG00000006184	lsm12b	92	85.204	ENSMNEG00000030594	-	100	85.204	Macaca_nemestrina
ENSOMEG00000006184	lsm12b	92	85.204	ENSMLEG00000039934	LSM12	100	85.204	Mandrillus_leucophaeus
ENSOMEG00000006184	lsm12b	92	98.469	ENSMAMG00000004279	lsm12b	100	98.469	Mastacembelus_armatus
ENSOMEG00000006184	lsm12b	92	97.449	ENSMZEG00005005754	lsm12b	100	97.449	Maylandia_zebra
ENSOMEG00000006184	lsm12b	92	85.714	ENSMICG00000037219	LSM12	100	86.364	Microcebus_murinus
ENSOMEG00000006184	lsm12b	92	85.204	ENSMOCG00000019878	-	100	85.204	Microtus_ochrogaster
ENSOMEG00000006184	lsm12b	94	70.792	ENSMOCG00000017015	-	89	70.792	Microtus_ochrogaster
ENSOMEG00000006184	lsm12b	92	98.469	ENSMMOG00000020848	lsm12b	100	98.469	Mola_mola
ENSOMEG00000006184	lsm12b	92	98.469	ENSMALG00000007578	lsm12b	100	98.469	Monopterus_albus
ENSOMEG00000006184	lsm12b	92	84.694	MGP_CAROLIEiJ_G0017241	Lsm12	100	84.694	Mus_caroli
ENSOMEG00000006184	lsm12b	92	85.204	ENSMUSG00000020922	Lsm12	100	85.204	Mus_musculus
ENSOMEG00000006184	lsm12b	92	78.404	MGP_PahariEiJ_G0018371	Lsm12	100	78.404	Mus_pahari
ENSOMEG00000006184	lsm12b	92	84.694	MGP_SPRETEiJ_G0018084	Lsm12	99	86.111	Mus_spretus
ENSOMEG00000006184	lsm12b	92	85.714	ENSMLUG00000006391	LSM12	100	85.714	Myotis_lucifugus
ENSOMEG00000006184	lsm12b	92	85.204	ENSNGAG00000001870	Lsm12	100	85.204	Nannospalax_galili
ENSOMEG00000006184	lsm12b	92	59.113	ENSNGAG00000015429	-	100	59.113	Nannospalax_galili
ENSOMEG00000006184	lsm12b	92	97.449	ENSNBRG00000006266	lsm12b	100	97.449	Neolamprologus_brichardi
ENSOMEG00000006184	lsm12b	92	85.204	ENSNLEG00000005580	-	100	85.204	Nomascus_leucogenys
ENSOMEG00000006184	lsm12b	78	85.542	ENSMEUG00000007501	-	100	85.542	Notamacropus_eugenii
ENSOMEG00000006184	lsm12b	92	85.204	ENSOPRG00000008552	LSM12	100	85.204	Ochotona_princeps
ENSOMEG00000006184	lsm12b	92	77.551	ENSODEG00000007886	-	74	77.551	Octodon_degus
ENSOMEG00000006184	lsm12b	91	85.052	ENSODEG00000017998	-	99	85.052	Octodon_degus
ENSOMEG00000006184	lsm12b	92	97.449	ENSONIG00000007933	lsm12b	100	97.449	Oreochromis_niloticus
ENSOMEG00000006184	lsm12b	91	80.000	ENSOCUG00000021254	-	100	80.000	Oryctolagus_cuniculus
ENSOMEG00000006184	lsm12b	91	78.974	ENSOCUG00000024823	-	100	78.974	Oryctolagus_cuniculus
ENSOMEG00000006184	lsm12b	92	83.417	ENSOCUG00000008566	-	100	83.417	Oryctolagus_cuniculus
ENSOMEG00000006184	lsm12b	91	79.487	ENSOCUG00000027889	-	100	79.487	Oryctolagus_cuniculus
ENSOMEG00000006184	lsm12b	92	98.980	ENSORLG00000011310	lsm12b	100	98.980	Oryzias_latipes
ENSOMEG00000006184	lsm12b	100	97.196	ENSORLG00020002060	lsm12b	100	97.196	Oryzias_latipes_hni
ENSOMEG00000006184	lsm12b	100	97.664	ENSORLG00015001647	lsm12b	100	97.664	Oryzias_latipes_hsok
ENSOMEG00000006184	lsm12b	92	85.714	ENSOGAG00000010489	LSM12	100	85.714	Otolemur_garnettii
ENSOMEG00000006184	lsm12b	92	82.178	ENSOARG00000006589	LSM12	100	82.178	Ovis_aries
ENSOMEG00000006184	lsm12b	92	75.510	ENSPPAG00000034974	-	100	75.510	Pan_paniscus
ENSOMEG00000006184	lsm12b	92	85.204	ENSPPRG00000023420	LSM12	100	85.204	Panthera_pardus
ENSOMEG00000006184	lsm12b	66	83.636	ENSPTIG00000014850	-	100	83.636	Panthera_tigris_altaica
ENSOMEG00000006184	lsm12b	71	84.967	ENSPTIG00000012704	-	82	84.967	Panthera_tigris_altaica
ENSOMEG00000006184	lsm12b	92	85.204	ENSPTRG00000009261	LSM12	100	85.204	Pan_troglodytes
ENSOMEG00000006184	lsm12b	92	85.204	ENSPANG00000021315	-	100	85.204	Papio_anubis
ENSOMEG00000006184	lsm12b	92	84.184	ENSPKIG00000017932	-	100	84.184	Paramormyrops_kingsleyae
ENSOMEG00000006184	lsm12b	92	93.367	ENSPKIG00000021058	lsm12b	100	93.367	Paramormyrops_kingsleyae
ENSOMEG00000006184	lsm12b	92	98.469	ENSPMGG00000021344	lsm12b	100	98.469	Periophthalmus_magnuspinnatus
ENSOMEG00000006184	lsm12b	92	85.204	ENSPEMG00000012199	Lsm12	100	85.204	Peromyscus_maniculatus_bairdii
ENSOMEG00000006184	lsm12b	82	67.429	ENSPMAG00000005461	lsm12a	99	67.429	Petromyzon_marinus
ENSOMEG00000006184	lsm12b	92	85.204	ENSPCIG00000020244	LSM12	100	85.204	Phascolarctos_cinereus
ENSOMEG00000006184	lsm12b	92	95.918	ENSPFOG00000015930	lsm12b	100	95.918	Poecilia_formosa
ENSOMEG00000006184	lsm12b	92	95.918	ENSPLAG00000021089	lsm12b	100	95.918	Poecilia_latipinna
ENSOMEG00000006184	lsm12b	92	95.918	ENSPMEG00000012961	lsm12b	100	95.918	Poecilia_mexicana
ENSOMEG00000006184	lsm12b	80	97.076	ENSPREG00000010236	lsm12b	95	97.076	Poecilia_reticulata
ENSOMEG00000006184	lsm12b	92	85.204	ENSPPYG00000008344	LSM12	100	85.204	Pongo_abelii
ENSOMEG00000006184	lsm12b	74	86.164	ENSPCAG00000008790	LSM12	100	86.164	Procavia_capensis
ENSOMEG00000006184	lsm12b	92	85.204	ENSPCOG00000027951	LSM12	100	85.204	Propithecus_coquereli
ENSOMEG00000006184	lsm12b	92	85.714	ENSPVAG00000013706	LSM12	100	85.714	Pteropus_vampyrus
ENSOMEG00000006184	lsm12b	92	97.449	ENSPNYG00000003386	lsm12b	100	97.449	Pundamilia_nyererei
ENSOMEG00000006184	lsm12b	92	85.714	ENSPNAG00000018435	lsm12a	100	85.714	Pygocentrus_nattereri
ENSOMEG00000006184	lsm12b	92	93.878	ENSPNAG00000004186	lsm12b	100	93.878	Pygocentrus_nattereri
ENSOMEG00000006184	lsm12b	92	85.204	ENSRNOG00000020894	Lsm12	100	85.204	Rattus_norvegicus
ENSOMEG00000006184	lsm12b	92	85.204	ENSRBIG00000027910	LSM12	100	85.204	Rhinopithecus_bieti
ENSOMEG00000006184	lsm12b	89	53.403	ENSRROG00000000537	-	97	53.403	Rhinopithecus_roxellana
ENSOMEG00000006184	lsm12b	92	85.204	ENSRROG00000045530	-	100	85.204	Rhinopithecus_roxellana
ENSOMEG00000006184	lsm12b	92	85.204	ENSSBOG00000025310	LSM12	100	85.204	Saimiri_boliviensis_boliviensis
ENSOMEG00000006184	lsm12b	74	83.544	ENSSHAG00000014914	LSM12	100	83.544	Sarcophilus_harrisii
ENSOMEG00000006184	lsm12b	92	94.898	ENSSFOG00015009612	lsm12	100	94.898	Scleropages_formosus
ENSOMEG00000006184	lsm12b	92	94.388	ENSSFOG00015020392	lsm12a	100	94.388	Scleropages_formosus
ENSOMEG00000006184	lsm12b	92	98.469	ENSSMAG00000008089	lsm12b	100	98.469	Scophthalmus_maximus
ENSOMEG00000006184	lsm12b	92	98.469	ENSSDUG00000012711	lsm12b	100	98.469	Seriola_dumerili
ENSOMEG00000006184	lsm12b	92	98.469	ENSSLDG00000007404	lsm12b	100	98.469	Seriola_lalandi_dorsalis
ENSOMEG00000006184	lsm12b	71	84.314	ENSSARG00000005537	LSM12	100	84.314	Sorex_araneus
ENSOMEG00000006184	lsm12b	92	85.714	ENSSPUG00000011984	LSM12	100	85.714	Sphenodon_punctatus
ENSOMEG00000006184	lsm12b	92	98.980	ENSSPAG00000017058	lsm12b	100	98.980	Stegastes_partitus
ENSOMEG00000006184	lsm12b	92	85.204	ENSSSCG00000032394	LSM12	100	85.204	Sus_scrofa
ENSOMEG00000006184	lsm12b	92	97.449	ENSTRUG00000007121	lsm12b	100	97.449	Takifugu_rubripes
ENSOMEG00000006184	lsm12b	92	96.429	ENSTNIG00000014436	lsm12b	100	96.429	Tetraodon_nigroviridis
ENSOMEG00000006184	lsm12b	92	84.694	ENSTBEG00000012523	-	100	84.694	Tupaia_belangeri
ENSOMEG00000006184	lsm12b	92	82.653	ENSTBEG00000012392	-	100	82.653	Tupaia_belangeri
ENSOMEG00000006184	lsm12b	92	85.204	ENSTTRG00000010433	LSM12	100	85.204	Tursiops_truncatus
ENSOMEG00000006184	lsm12b	92	85.204	ENSUAMG00000006313	LSM12	100	85.204	Ursus_americanus
ENSOMEG00000006184	lsm12b	74	82.278	ENSUMAG00000012987	LSM12	90	82.278	Ursus_maritimus
ENSOMEG00000006184	lsm12b	92	80.612	ENSVPAG00000011145	LSM12	100	80.612	Vicugna_pacos
ENSOMEG00000006184	lsm12b	92	85.204	ENSVVUG00000017581	LSM12	100	85.204	Vulpes_vulpes
ENSOMEG00000006184	lsm12b	75	61.250	ENSXETG00000003371	lsm12	77	61.250	Xenopus_tropicalis
ENSOMEG00000006184	lsm12b	92	96.939	ENSXCOG00000003994	lsm12b	100	96.939	Xiphophorus_couchianus
ENSOMEG00000006184	lsm12b	92	96.939	ENSXMAG00000020950	lsm12b	100	96.939	Xiphophorus_maculatus