EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000006327 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3134 bases
Position: chrNVQA01000035.1:6045985-6049118
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005325	RRM_1	PF00076.22	5.9e-31	1	2
ENSOMEP00000005325	RRM_1	PF00076.22	5.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000007670	-	876	-	ENSOMEP00000005325	291 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000006327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000006327	-	80	84.146	ENSOMEG00000013637	-	74	84.146
ENSOMEG00000006327	-	67	80.808	ENSOMEG00000002084	-	72	80.645
ENSOMEG00000006327	-	70	41.714	ENSOMEG00000015959	-	78	37.692
ENSOMEG00000006327	-	66	38.710	ENSOMEG00000002272	-	57	38.710
ENSOMEG00000006327	-	97	82.500	ENSOMEG00000002000	-	99	82.500
ENSOMEG00000006327	-	97	91.080	ENSOMEG00000012368	-	95	91.080
ENSOMEG00000006327	-	59	35.465	ENSOMEG00000005936	hnrnpaba	50	35.465
ENSOMEG00000006327	-	64	51.852	ENSOMEG00000009566	-	87	51.852
ENSOMEG00000006327	-	59	35.465	ENSOMEG00000023772	hnrnpabb	53	36.571
ENSOMEG00000006327	-	95	84.507	ENSOMEG00000006903	-	93	78.151
ENSOMEG00000006327	-	91	58.025	ENSOMEG00000002091	-	89	58.025
ENSOMEG00000006327	-	63	41.954	ENSOMEG00000004838	hnrnpa3	55	41.714
ENSOMEG00000006327	-	90	30.970	ENSOMEG00000000146	msi2a	56	35.795
ENSOMEG00000006327	-	73	50.877	ENSOMEG00000011670	-	94	50.877
ENSOMEG00000006327	-	97	91.080	ENSOMEG00000002509	-	100	91.080
ENSOMEG00000006327	-	97	84.977	ENSOMEG00000021030	-	100	84.977
ENSOMEG00000006327	-	70	39.785	ENSOMEG00000017536	MSI1	55	39.785
ENSOMEG00000006327	-	95	89.202	ENSOMEG00000023475	-	85	89.202
ENSOMEG00000006327	-	59	36.628	ENSOMEG00000018558	hnrnpd	80	31.786

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006327	-	60	48.276	ENSAOCG00000015914	-	62	48.276	Amphiprion_ocellaris
ENSOMEG00000006327	-	73	68.750	ENSAOCG00000015951	-	95	68.750	Amphiprion_ocellaris
ENSOMEG00000006327	-	60	48.276	ENSAPEG00000002224	-	72	48.276	Amphiprion_percula
ENSOMEG00000006327	-	73	68.750	ENSAPEG00000002274	-	95	68.750	Amphiprion_percula
ENSOMEG00000006327	-	60	49.425	ENSACLG00000008978	-	79	49.425	Astatotilapia_calliptera
ENSOMEG00000006327	-	60	48.851	ENSCVAG00000008324	-	74	48.851	Cyprinodon_variegatus
ENSOMEG00000006327	-	62	35.632	FBgn0004237	Hrb87F	70	33.684	Drosophila_melanogaster
ENSOMEG00000006327	-	67	35.789	FBgn0001215	Hrb98DE	81	32.770	Drosophila_melanogaster
ENSOMEG00000006327	-	60	36.250	ENSEBUG00000010003	-	88	36.250	Eptatretus_burgeri
ENSOMEG00000006327	-	73	43.529	ENSELUG00000014407	-	96	43.529	Esox_lucius
ENSOMEG00000006327	-	60	49.425	ENSHBUG00000023867	-	79	49.425	Haplochromis_burtoni
ENSOMEG00000006327	-	60	44.000	ENSHCOG00000007180	-	74	44.068	Hippocampus_comes
ENSOMEG00000006327	-	64	42.593	ENSLBEG00000006362	-	76	42.593	Labrus_bergylta
ENSOMEG00000006327	-	65	38.136	ENSLOCG00000012121	-	63	38.136	Lepisosteus_oculatus
ENSOMEG00000006327	-	60	49.425	ENSMAMG00000017728	-	65	49.425	Mastacembelus_armatus
ENSOMEG00000006327	-	60	49.425	ENSMZEG00005001063	-	77	49.425	Maylandia_zebra
ENSOMEG00000006327	-	73	46.429	ENSMMOG00000004242	-	96	46.429	Mola_mola
ENSOMEG00000006327	-	79	31.004	ENSMEUG00000003051	-	58	34.857	Notamacropus_eugenii
ENSOMEG00000006327	-	70	68.354	ENSORLG00000030284	-	69	68.354	Oryzias_latipes
ENSOMEG00000006327	-	96	43.478	ENSORLG00000023176	-	98	41.214	Oryzias_latipes
ENSOMEG00000006327	-	97	45.205	ENSORLG00000023542	-	98	42.532	Oryzias_latipes
ENSOMEG00000006327	-	70	68.750	ENSORLG00020007084	-	78	68.750	Oryzias_latipes_hni
ENSOMEG00000006327	-	94	40.678	ENSORLG00020006029	-	93	42.177	Oryzias_latipes_hni
ENSOMEG00000006327	-	64	46.471	ENSORLG00020007171	-	93	46.471	Oryzias_latipes_hni
ENSOMEG00000006327	-	60	48.851	ENSPREG00000010603	-	57	48.851	Poecilia_reticulata
ENSOMEG00000006327	-	60	49.425	ENSPNYG00000020763	-	79	49.425	Pundamilia_nyererei
ENSOMEG00000006327	-	64	43.125	ENSPNAG00000018051	-	79	43.125	Pygocentrus_nattereri
ENSOMEG00000006327	-	63	43.407	ENSSHAG00000015609	-	81	43.407	Sarcophilus_harrisii
ENSOMEG00000006327	-	64	45.062	ENSSDUG00000002394	-	84	45.062	Seriola_dumerili
ENSOMEG00000006327	-	72	49.367	ENSSLDG00000024685	-	88	49.367	Seriola_lalandi_dorsalis