EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000006406 (Gene tree)
Gene ID: 112158745
Gene Symbol: snd1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 181224 bases
Position: chrNVQA01000003.1:11248743-11429966
Accession: 112158745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000025246	TUDOR	PF00567.24	6.7e-27	1	1
ENSOMEP00000025246	SNase	PF00565.17	2.2e-68	1	4
ENSOMEP00000025246	SNase	PF00565.17	2.2e-68	2	4
ENSOMEP00000025246	SNase	PF00565.17	2.2e-68	3	4
ENSOMEP00000025246	SNase	PF00565.17	2.2e-68	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000007613	-	3824	XM_024292246	ENSOMEP00000025246	911 (aa)	XP_024148014	UPI000CF813C6

Gene Model

Click here to download ENSOMEG00000006406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006406	snd1	98	84.228	ENSG00000197157	SND1	100	83.004	Homo_sapiens
ENSOMEG00000006406	snd1	100	94.621	ENSAPOG00000017599	snd1	100	94.621	Acanthochromis_polyacanthus
ENSOMEG00000006406	snd1	99	82.932	ENSAMEG00000004664	SND1	94	82.932	Ailuropoda_melanoleuca
ENSOMEG00000006406	snd1	100	91.328	ENSACIG00000003551	snd1	100	91.328	Amphilophus_citrinellus
ENSOMEG00000006406	snd1	100	94.402	ENSAOCG00000014166	snd1	100	94.402	Amphiprion_ocellaris
ENSOMEG00000006406	snd1	100	94.402	ENSAPEG00000007067	snd1	100	94.402	Amphiprion_percula
ENSOMEG00000006406	snd1	98	93.736	ENSATEG00000018475	snd1	89	93.736	Anabas_testudineus
ENSOMEG00000006406	snd1	98	84.340	ENSANAG00000034463	SND1	99	84.312	Aotus_nancymaae
ENSOMEG00000006406	snd1	100	93.743	ENSACLG00000022897	snd1	100	93.743	Astatotilapia_calliptera
ENSOMEG00000006406	snd1	99	89.670	ENSAMXG00000016318	snd1	99	89.670	Astyanax_mexicanus
ENSOMEG00000006406	snd1	98	84.452	ENSBTAG00000010692	SND1	100	83.224	Bos_taurus
ENSOMEG00000006406	snd1	99	47.243	WBGene00006626	tsn-1	99	47.568	Caenorhabditis_elegans
ENSOMEG00000006406	snd1	98	84.228	ENSCJAG00000017668	SND1	99	84.199	Callithrix_jacchus
ENSOMEG00000006406	snd1	99	83.224	ENSCAFG00000001700	SND1	100	83.224	Canis_familiaris
ENSOMEG00000006406	snd1	99	83.224	ENSCAFG00020021639	SND1	100	83.224	Canis_lupus_dingo
ENSOMEG00000006406	snd1	98	84.340	ENSCHIG00000023390	SND1	100	83.114	Capra_hircus
ENSOMEG00000006406	snd1	70	87.193	ENSTSYG00000004979	SND1	96	87.193	Carlito_syrichta
ENSOMEG00000006406	snd1	97	74.212	ENSCAPG00000010677	SND1	97	74.212	Cavia_aperea
ENSOMEG00000006406	snd1	98	84.116	ENSCPOG00000006251	SND1	100	82.895	Cavia_porcellus
ENSOMEG00000006406	snd1	98	84.340	ENSCCAG00000036847	SND1	100	83.114	Cebus_capucinus
ENSOMEG00000006406	snd1	98	84.452	ENSCATG00000035214	SND1	99	84.424	Cercocebus_atys
ENSOMEG00000006406	snd1	98	84.116	ENSCLAG00000011796	SND1	98	85.067	Chinchilla_lanigera
ENSOMEG00000006406	snd1	98	84.452	ENSCSAG00000010182	SND1	100	83.224	Chlorocebus_sabaeus
ENSOMEG00000006406	snd1	77	78.218	ENSCHOG00000002218	SND1	86	78.218	Choloepus_hoffmanni
ENSOMEG00000006406	snd1	100	83.754	ENSCPBG00000018094	SND1	100	83.754	Chrysemys_picta_bellii
ENSOMEG00000006406	snd1	98	56.811	ENSCING00000000524	-	98	56.811	Ciona_intestinalis
ENSOMEG00000006406	snd1	99	57.314	ENSCSAVG00000008807	-	99	57.314	Ciona_savignyi
ENSOMEG00000006406	snd1	98	84.452	ENSCANG00000035119	SND1	100	83.224	Colobus_angolensis_palliatus
ENSOMEG00000006406	snd1	98	84.116	ENSCGRG00001022514	Snd1	98	85.067	Cricetulus_griseus_chok1gshd
ENSOMEG00000006406	snd1	97	84.086	ENSCGRG00000012277	Snd1	99	84.086	Cricetulus_griseus_crigri
ENSOMEG00000006406	snd1	100	92.755	ENSCSEG00000008661	snd1	100	92.755	Cynoglossus_semilaevis
ENSOMEG00000006406	snd1	100	94.951	ENSCVAG00000010316	snd1	100	94.951	Cyprinodon_variegatus
ENSOMEG00000006406	snd1	100	88.609	ENSDARG00000006766	snd1	99	91.182	Danio_rerio
ENSOMEG00000006406	snd1	97	82.115	ENSDNOG00000006795	SND1	100	82.115	Dasypus_novemcinctus
ENSOMEG00000006406	snd1	98	84.228	ENSDORG00000000336	Snd1	100	83.004	Dipodomys_ordii
ENSOMEG00000006406	snd1	97	50.219	FBgn0035121	Tudor-SN	99	49.679	Drosophila_melanogaster
ENSOMEG00000006406	snd1	90	88.889	ENSETEG00000000375	SND1	92	88.889	Echinops_telfairi
ENSOMEG00000006406	snd1	60	67.568	ENSEBUG00000014201	-	84	76.630	Eptatretus_burgeri
ENSOMEG00000006406	snd1	98	83.058	ENSEASG00005008513	SND1	100	81.877	Equus_asinus_asinus
ENSOMEG00000006406	snd1	98	84.228	ENSECAG00000011451	SND1	100	83.004	Equus_caballus
ENSOMEG00000006406	snd1	98	74.944	ENSEEUG00000014737	SND1	100	73.794	Erinaceus_europaeus
ENSOMEG00000006406	snd1	99	88.474	ENSELUG00000001805	snd1	96	88.474	Esox_lucius
ENSOMEG00000006406	snd1	99	83.114	ENSFCAG00000008289	SND1	100	83.114	Felis_catus
ENSOMEG00000006406	snd1	98	84.116	ENSFDAG00000015881	SND1	100	82.895	Fukomys_damarensis
ENSOMEG00000006406	snd1	100	92.159	ENSFHEG00000004093	snd1	99	93.629	Fundulus_heteroclitus
ENSOMEG00000006406	snd1	75	83.333	ENSGMOG00000018932	snd1	66	83.333	Gadus_morhua
ENSOMEG00000006406	snd1	100	94.621	ENSGAFG00000008421	snd1	100	94.621	Gambusia_affinis
ENSOMEG00000006406	snd1	100	61.063	ENSGACG00000019793	snd1	100	61.063	Gasterosteus_aculeatus
ENSOMEG00000006406	snd1	98	84.452	ENSGGOG00000009614	SND1	99	84.424	Gorilla_gorilla
ENSOMEG00000006406	snd1	100	93.633	ENSHBUG00000019135	snd1	100	93.633	Haplochromis_burtoni
ENSOMEG00000006406	snd1	98	83.893	ENSHGLG00000003618	SND1	100	82.675	Heterocephalus_glaber_female
ENSOMEG00000006406	snd1	98	83.893	ENSHGLG00100012449	SND1	99	83.893	Heterocephalus_glaber_male
ENSOMEG00000006406	snd1	100	92.316	ENSHCOG00000005266	snd1	100	92.316	Hippocampus_comes
ENSOMEG00000006406	snd1	99	88.804	ENSIPUG00000013279	snd1	99	88.804	Ictalurus_punctatus
ENSOMEG00000006406	snd1	98	84.452	ENSSTOG00000002140	SND1	100	83.224	Ictidomys_tridecemlineatus
ENSOMEG00000006406	snd1	98	84.228	ENSJJAG00000009561	Snd1	100	83.004	Jaculus_jaculus
ENSOMEG00000006406	snd1	100	94.731	ENSKMAG00000016997	snd1	100	94.731	Kryptolebias_marmoratus
ENSOMEG00000006406	snd1	100	94.622	ENSLBEG00000013563	snd1	100	93.743	Labrus_bergylta
ENSOMEG00000006406	snd1	98	88.300	ENSLOCG00000015537	snd1	99	87.595	Lepisosteus_oculatus
ENSOMEG00000006406	snd1	99	83.333	ENSLAFG00000009696	SND1	100	83.333	Loxodonta_africana
ENSOMEG00000006406	snd1	98	84.452	ENSMFAG00000038114	SND1	99	84.424	Macaca_fascicularis
ENSOMEG00000006406	snd1	98	84.452	ENSMMUG00000015432	SND1	100	83.224	Macaca_mulatta
ENSOMEG00000006406	snd1	98	84.452	ENSMNEG00000039808	SND1	100	84.442	Macaca_nemestrina
ENSOMEG00000006406	snd1	98	84.340	ENSMLEG00000029040	SND1	100	84.329	Mandrillus_leucophaeus
ENSOMEG00000006406	snd1	100	93.743	ENSMAMG00000011739	snd1	100	93.743	Mastacembelus_armatus
ENSOMEG00000006406	snd1	100	93.743	ENSMZEG00005005681	snd1	100	93.743	Maylandia_zebra
ENSOMEG00000006406	snd1	98	84.228	ENSMICG00000000097	SND1	100	83.004	Microcebus_murinus
ENSOMEG00000006406	snd1	98	84.564	ENSMOCG00000005040	Snd1	100	83.333	Microtus_ochrogaster
ENSOMEG00000006406	snd1	100	93.633	ENSMMOG00000001795	snd1	100	93.633	Mola_mola
ENSOMEG00000006406	snd1	98	83.669	ENSMODG00000015182	SND1	100	82.456	Monodelphis_domestica
ENSOMEG00000006406	snd1	100	93.085	ENSMALG00000012071	snd1	100	93.085	Monopterus_albus
ENSOMEG00000006406	snd1	98	84.116	MGP_CAROLIEiJ_G0028159	Snd1	99	84.706	Mus_caroli
ENSOMEG00000006406	snd1	98	83.893	ENSMUSG00000001424	Snd1	100	82.675	Mus_musculus
ENSOMEG00000006406	snd1	98	84.116	MGP_PahariEiJ_G0021917	Snd1	100	84.706	Mus_pahari
ENSOMEG00000006406	snd1	98	84.116	MGP_SPRETEiJ_G0029159	Snd1	100	82.895	Mus_spretus
ENSOMEG00000006406	snd1	100	83.114	ENSMPUG00000006545	SND1	100	83.114	Mustela_putorius_furo
ENSOMEG00000006406	snd1	97	83.278	ENSMLUG00000017130	SND1	99	83.278	Myotis_lucifugus
ENSOMEG00000006406	snd1	98	84.228	ENSNGAG00000011186	Snd1	100	83.004	Nannospalax_galili
ENSOMEG00000006406	snd1	100	93.743	ENSNBRG00000006681	snd1	100	93.743	Neolamprologus_brichardi
ENSOMEG00000006406	snd1	98	84.452	ENSNLEG00000012263	SND1	100	84.442	Nomascus_leucogenys
ENSOMEG00000006406	snd1	91	88.889	ENSOPRG00000013405	SND1	92	88.889	Ochotona_princeps
ENSOMEG00000006406	snd1	98	84.228	ENSODEG00000011502	SND1	100	82.986	Octodon_degus
ENSOMEG00000006406	snd1	100	93.743	ENSONIG00000011481	snd1	97	93.743	Oreochromis_niloticus
ENSOMEG00000006406	snd1	98	83.596	ENSOANG00000000817	SND1	98	83.596	Ornithorhynchus_anatinus
ENSOMEG00000006406	snd1	99	82.456	ENSOCUG00000001620	SND1	100	82.456	Oryctolagus_cuniculus
ENSOMEG00000006406	snd1	100	96.487	ENSORLG00000015201	snd1	100	96.487	Oryzias_latipes
ENSOMEG00000006406	snd1	100	96.707	ENSORLG00020013991	snd1	100	96.707	Oryzias_latipes_hni
ENSOMEG00000006406	snd1	100	96.597	ENSORLG00015012436	snd1	100	96.597	Oryzias_latipes_hsok
ENSOMEG00000006406	snd1	98	84.040	ENSOGAG00000013356	SND1	94	82.823	Otolemur_garnettii
ENSOMEG00000006406	snd1	97	81.962	ENSOARG00000002149	SND1	100	81.962	Ovis_aries
ENSOMEG00000006406	snd1	98	84.340	ENSPPAG00000042947	SND1	99	84.312	Pan_paniscus
ENSOMEG00000006406	snd1	99	83.114	ENSPPRG00000004494	SND1	100	83.114	Panthera_pardus
ENSOMEG00000006406	snd1	99	83.004	ENSPTIG00000014214	SND1	100	83.004	Panthera_tigris_altaica
ENSOMEG00000006406	snd1	98	84.340	ENSPTRG00000023911	SND1	99	84.312	Pan_troglodytes
ENSOMEG00000006406	snd1	97	84.424	ENSPANG00000011997	SND1	99	84.424	Papio_anubis
ENSOMEG00000006406	snd1	99	86.519	ENSPKIG00000023494	snd1	99	86.041	Paramormyrops_kingsleyae
ENSOMEG00000006406	snd1	92	92.584	ENSPMGG00000003629	snd1	100	92.584	Periophthalmus_magnuspinnatus
ENSOMEG00000006406	snd1	98	84.340	ENSPEMG00000010240	Snd1	100	83.114	Peromyscus_maniculatus_bairdii
ENSOMEG00000006406	snd1	97	74.718	ENSPMAG00000007915	-	99	74.718	Petromyzon_marinus
ENSOMEG00000006406	snd1	98	84.116	ENSPCIG00000011561	SND1	100	82.895	Phascolarctos_cinereus
ENSOMEG00000006406	snd1	100	94.292	ENSPFOG00000001557	snd1	100	94.292	Poecilia_formosa
ENSOMEG00000006406	snd1	100	94.402	ENSPLAG00000018459	snd1	97	94.402	Poecilia_latipinna
ENSOMEG00000006406	snd1	100	94.512	ENSPMEG00000006803	snd1	100	94.512	Poecilia_mexicana
ENSOMEG00000006406	snd1	100	94.292	ENSPREG00000002189	snd1	100	94.292	Poecilia_reticulata
ENSOMEG00000006406	snd1	91	88.889	ENSPPYG00000017972	SND1	100	88.889	Pongo_abelii
ENSOMEG00000006406	snd1	98	74.497	ENSPCAG00000011305	SND1	100	73.355	Procavia_capensis
ENSOMEG00000006406	snd1	98	84.228	ENSPCOG00000026791	SND1	100	84.216	Propithecus_coquereli
ENSOMEG00000006406	snd1	98	82.438	ENSPVAG00000013945	SND1	100	81.250	Pteropus_vampyrus
ENSOMEG00000006406	snd1	100	93.633	ENSPNYG00000000932	snd1	100	93.633	Pundamilia_nyererei
ENSOMEG00000006406	snd1	99	89.780	ENSPNAG00000001206	snd1	99	89.780	Pygocentrus_nattereri
ENSOMEG00000006406	snd1	98	84.004	ENSRNOG00000031173	Snd1	100	82.976	Rattus_norvegicus
ENSOMEG00000006406	snd1	70	87.640	ENSRBIG00000027782	-	93	87.689	Rhinopithecus_bieti
ENSOMEG00000006406	snd1	99	83.463	ENSRROG00000033020	SND1	100	83.224	Rhinopithecus_roxellana
ENSOMEG00000006406	snd1	98	84.340	ENSSBOG00000032461	SND1	99	84.312	Saimiri_boliviensis_boliviensis
ENSOMEG00000006406	snd1	98	80.787	ENSSHAG00000015359	SND1	100	80.787	Sarcophilus_harrisii
ENSOMEG00000006406	snd1	98	88.359	ENSSFOG00015001103	snd1	99	87.582	Scleropages_formosus
ENSOMEG00000006406	snd1	100	93.414	ENSSMAG00000001932	snd1	95	93.414	Scophthalmus_maximus
ENSOMEG00000006406	snd1	100	94.182	ENSSDUG00000002699	snd1	94	94.182	Seriola_dumerili
ENSOMEG00000006406	snd1	100	86.718	ENSSLDG00000001950	snd1	100	86.718	Seriola_lalandi_dorsalis
ENSOMEG00000006406	snd1	86	79.234	ENSSARG00000004877	SND1	92	79.234	Sorex_araneus
ENSOMEG00000006406	snd1	70	80.243	ENSSPUG00000017586	SND1	96	80.243	Sphenodon_punctatus
ENSOMEG00000006406	snd1	73	94.247	ENSSPAG00000021398	snd1	99	94.247	Stegastes_partitus
ENSOMEG00000006406	snd1	98	84.452	ENSSSCG00000016590	SND1	100	83.224	Sus_scrofa
ENSOMEG00000006406	snd1	100	91.779	ENSTRUG00000014067	snd1	100	91.438	Takifugu_rubripes
ENSOMEG00000006406	snd1	100	91.767	ENSTNIG00000011019	snd1	100	91.767	Tetraodon_nigroviridis
ENSOMEG00000006406	snd1	93	78.706	ENSTBEG00000003999	SND1	100	78.706	Tupaia_belangeri
ENSOMEG00000006406	snd1	98	80.089	ENSTTRG00000006059	SND1	100	78.947	Tursiops_truncatus
ENSOMEG00000006406	snd1	68	76.240	ENSUAMG00000002820	-	89	76.240	Ursus_americanus
ENSOMEG00000006406	snd1	87	83.080	ENSUAMG00000005604	-	93	83.080	Ursus_americanus
ENSOMEG00000006406	snd1	99	83.114	ENSUMAG00000005960	SND1	100	83.114	Ursus_maritimus
ENSOMEG00000006406	snd1	77	88.889	ENSVPAG00000008302	SND1	74	88.889	Vicugna_pacos
ENSOMEG00000006406	snd1	99	83.114	ENSVVUG00000007226	SND1	100	83.114	Vulpes_vulpes
ENSOMEG00000006406	snd1	97	79.594	ENSXETG00000023043	snd1	100	79.452	Xenopus_tropicalis
ENSOMEG00000006406	snd1	92	91.924	ENSXCOG00000013629	snd1	99	91.924	Xiphophorus_couchianus
ENSOMEG00000006406	snd1	100	94.951	ENSXMAG00000011469	snd1	100	94.951	Xiphophorus_maculatus