EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000006508 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 10236 bases
Position: chrNVQA01000005.1:16936079-16946314
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005473	RRM_5	PF13893.6	3.4e-11	1	2
ENSOMEP00000005473	RRM_5	PF13893.6	3.4e-11	2	2
ENSOMEP00000025295	RRM_5	PF13893.6	9.4e-10	1	2
ENSOMEP00000025295	RRM_5	PF13893.6	9.4e-10	2	2
ENSOMEP00000025303	RRM_5	PF13893.6	1.2e-09	1	2
ENSOMEP00000025303	RRM_5	PF13893.6	1.2e-09	2	2
ENSOMEP00000025303	RRM_1	PF00076.22	6.4e-35	1	2
ENSOMEP00000025303	RRM_1	PF00076.22	6.4e-35	2	2
ENSOMEP00000025295	RRM_1	PF00076.22	1.3e-34	1	2
ENSOMEP00000025295	RRM_1	PF00076.22	1.3e-34	2	2
ENSOMEP00000005473	RRM_1	PF00076.22	1.3e-33	1	2
ENSOMEP00000005473	RRM_1	PF00076.22	1.3e-33	2	2
ENSOMEP00000005432	RRM_1	PF00076.22	4.4e-32	1	2
ENSOMEP00000005432	RRM_1	PF00076.22	4.4e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000007469	-	471	-	ENSOMEP00000025303	156 (aa)	-	-
ENSOMET00000007431	-	1758	-	ENSOMEP00000005473	585 (aa)	-	-
ENSOMET00000007492	-	519	-	ENSOMEP00000005432	172 (aa)	-	-
ENSOMET00000007500	-	516	-	ENSOMEP00000025295	171 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000006508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000006508	-	92	37.063	ENSOMEG00000021202	-	98	33.889
ENSOMEG00000006508	-	96	30.380	ENSOMEG00000016484	tia1l	69	30.488
ENSOMEG00000006508	-	97	62.500	ENSOMEG00000000910	rbm14b	68	55.780
ENSOMEG00000006508	-	88	32.450	ENSOMEG00000015322	-	52	30.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006508	-	93	48.980	ENSG00000239306	RBM14	100	47.899	Homo_sapiens
ENSOMEG00000006508	-	94	93.197	ENSAPOG00000003380	-	80	87.952	Acanthochromis_polyacanthus
ENSOMEG00000006508	-	94	64.138	ENSAPOG00000021712	rbm14b	50	60.417	Acanthochromis_polyacanthus
ENSOMEG00000006508	-	95	93.919	ENSACIG00000021173	-	80	89.381	Amphilophus_citrinellus
ENSOMEG00000006508	-	96	92.667	ENSAOCG00000001659	-	79	89.264	Amphiprion_ocellaris
ENSOMEG00000006508	-	97	63.158	ENSAOCG00000008941	rbm14b	72	55.874	Amphiprion_ocellaris
ENSOMEG00000006508	-	97	63.158	ENSAPEG00000003161	rbm14b	72	56.936	Amphiprion_percula
ENSOMEG00000006508	-	94	93.878	ENSAPEG00000016988	-	80	88.855	Amphiprion_percula
ENSOMEG00000006508	-	94	66.207	ENSATEG00000003034	rbm14b	69	57.224	Anabas_testudineus
ENSOMEG00000006508	-	96	93.333	ENSATEG00000009700	-	77	86.431	Anabas_testudineus
ENSOMEG00000006508	-	96	38.065	ENSACAG00000028084	-	100	39.073	Anolis_carolinensis
ENSOMEG00000006508	-	92	51.948	ENSANAG00000035377	RBM14	84	41.722	Aotus_nancymaae
ENSOMEG00000006508	-	96	94.000	ENSACLG00000009112	-	77	88.554	Astatotilapia_calliptera
ENSOMEG00000006508	-	97	66.887	ENSAMXG00000007233	rbm14a	73	60.795	Astyanax_mexicanus
ENSOMEG00000006508	-	94	62.069	ENSAMXG00000031225	rbm14b	76	46.024	Astyanax_mexicanus
ENSOMEG00000006508	-	93	48.980	ENSCJAG00000001294	RBM14	100	47.899	Callithrix_jacchus
ENSOMEG00000006508	-	92	51.948	ENSTSYG00000000450	RBM14	100	47.899	Carlito_syrichta
ENSOMEG00000006508	-	93	48.980	ENSCPOG00000008019	RBM14	100	47.899	Cavia_porcellus
ENSOMEG00000006508	-	92	51.948	ENSCCAG00000019303	RBM14	96	43.750	Cebus_capucinus
ENSOMEG00000006508	-	93	47.619	ENSCCAG00000034251	-	94	47.619	Cebus_capucinus
ENSOMEG00000006508	-	93	48.980	ENSCATG00000036313	RBM14	96	43.750	Cercocebus_atys
ENSOMEG00000006508	-	93	48.980	ENSCLAG00000015277	RBM14	100	47.899	Chinchilla_lanigera
ENSOMEG00000006508	-	89	50.000	ENSCSAG00000008356	-	77	50.442	Chlorocebus_sabaeus
ENSOMEG00000006508	-	92	51.948	ENSCANG00000028611	RBM14	100	47.899	Colobus_angolensis_palliatus
ENSOMEG00000006508	-	93	48.980	ENSCGRG00001024921	Rbm14	100	47.899	Cricetulus_griseus_chok1gshd
ENSOMEG00000006508	-	93	48.980	ENSCGRG00000010784	Rbm14	100	47.899	Cricetulus_griseus_crigri
ENSOMEG00000006508	-	94	64.138	ENSCSEG00000000357	rbm14b	71	51.654	Cynoglossus_semilaevis
ENSOMEG00000006508	-	96	91.333	ENSCSEG00000019690	-	81	85.366	Cynoglossus_semilaevis
ENSOMEG00000006508	-	96	92.000	ENSCVAG00000014858	-	79	88.199	Cyprinodon_variegatus
ENSOMEG00000006508	-	94	62.759	ENSDARG00000012723	rbm14a	70	59.593	Danio_rerio
ENSOMEG00000006508	-	94	62.759	ENSDARG00000103834	rbm14b	55	60.870	Danio_rerio
ENSOMEG00000006508	-	93	48.980	ENSDORG00000002474	Rbm14	100	47.899	Dipodomys_ordii
ENSOMEG00000006508	-	97	39.073	ENSEBUG00000008661	-	65	37.368	Eptatretus_burgeri
ENSOMEG00000006508	-	94	66.897	ENSELUG00000004690	rbm14b	62	60.714	Esox_lucius
ENSOMEG00000006508	-	94	68.966	ENSELUG00000023633	rbm14a	73	54.974	Esox_lucius
ENSOMEG00000006508	-	93	48.980	ENSFCAG00000007392	RBM14	100	47.899	Felis_catus
ENSOMEG00000006508	-	93	48.980	ENSFDAG00000002787	RBM14	100	47.899	Fukomys_damarensis
ENSOMEG00000006508	-	94	64.828	ENSFHEG00000021265	rbm14b	74	48.837	Fundulus_heteroclitus
ENSOMEG00000006508	-	96	93.333	ENSFHEG00000020913	-	79	85.373	Fundulus_heteroclitus
ENSOMEG00000006508	-	99	85.065	ENSGMOG00000010840	-	69	78.723	Gadus_morhua
ENSOMEG00000006508	-	97	60.526	ENSGMOG00000009633	rbm14b	100	59.751	Gadus_morhua
ENSOMEG00000006508	-	96	92.667	ENSGAFG00000004455	-	79	86.486	Gambusia_affinis
ENSOMEG00000006508	-	97	62.667	ENSGACG00000019028	rbm14b	100	61.317	Gasterosteus_aculeatus
ENSOMEG00000006508	-	96	92.000	ENSGACG00000020440	-	78	87.117	Gasterosteus_aculeatus
ENSOMEG00000006508	-	72	49.558	ENSGAGG00000001366	-	80	50.893	Gopherus_agassizii
ENSOMEG00000006508	-	92	51.948	ENSGGOG00000014455	RBM14	83	43.750	Gorilla_gorilla
ENSOMEG00000006508	-	96	94.000	ENSHBUG00000003665	-	77	88.554	Haplochromis_burtoni
ENSOMEG00000006508	-	93	48.980	ENSHGLG00000012589	RBM14	100	47.899	Heterocephalus_glaber_female
ENSOMEG00000006508	-	93	48.299	ENSHGLG00100011836	RBM14	100	47.059	Heterocephalus_glaber_male
ENSOMEG00000006508	-	98	62.092	ENSHCOG00000012571	rbm14b	98	63.699	Hippocampus_comes
ENSOMEG00000006508	-	96	94.667	ENSHCOG00000004071	-	80	85.088	Hippocampus_comes
ENSOMEG00000006508	-	94	62.759	ENSIPUG00000009089	rbm14b	77	47.115	Ictalurus_punctatus
ENSOMEG00000006508	-	97	60.927	ENSIPUG00000021256	rbm14a	74	53.804	Ictalurus_punctatus
ENSOMEG00000006508	-	93	48.980	ENSSTOG00000009796	RBM14	100	47.899	Ictidomys_tridecemlineatus
ENSOMEG00000006508	-	99	43.750	ENSJJAG00000020814	Rbm14	100	47.899	Jaculus_jaculus
ENSOMEG00000006508	-	94	92.517	ENSKMAG00000008514	-	79	87.651	Kryptolebias_marmoratus
ENSOMEG00000006508	-	94	64.138	ENSLBEG00000027934	rbm14b	52	60.417	Labrus_bergylta
ENSOMEG00000006508	-	96	92.667	ENSLBEG00000001217	-	79	87.768	Labrus_bergylta
ENSOMEG00000006508	-	92	51.948	ENSMFAG00000003827	RBM4	96	43.750	Macaca_fascicularis
ENSOMEG00000006508	-	93	48.980	ENSMMUG00000020363	RBM14	88	43.357	Macaca_mulatta
ENSOMEG00000006508	-	92	51.948	ENSMNEG00000014872	RBM14	96	43.750	Macaca_nemestrina
ENSOMEG00000006508	-	92	51.948	ENSMLEG00000024601	RBM14	100	47.899	Mandrillus_leucophaeus
ENSOMEG00000006508	-	96	90.667	ENSMAMG00000021313	-	80	84.179	Mastacembelus_armatus
ENSOMEG00000006508	-	96	94.000	ENSMZEG00005001201	-	79	88.554	Maylandia_zebra
ENSOMEG00000006508	-	71	50.450	ENSMGAG00000016129	-	95	50.893	Meleagris_gallopavo
ENSOMEG00000006508	-	98	44.218	ENSMAUG00000017509	Rbm14	100	47.899	Mesocricetus_auratus
ENSOMEG00000006508	-	92	51.948	ENSMICG00000031929	RBM14	97	48.000	Microcebus_murinus
ENSOMEG00000006508	-	93	48.980	ENSMOCG00000002491	Rbm14	100	47.899	Microtus_ochrogaster
ENSOMEG00000006508	-	94	64.138	ENSMMOG00000012912	rbm14b	50	55.556	Mola_mola
ENSOMEG00000006508	-	94	92.466	ENSMMOG00000014501	-	79	86.957	Mola_mola
ENSOMEG00000006508	-	100	90.446	ENSMALG00000019079	-	100	92.053	Monopterus_albus
ENSOMEG00000006508	-	97	63.158	ENSMALG00000015445	rbm14b	76	56.022	Monopterus_albus
ENSOMEG00000006508	-	93	48.980	MGP_CAROLIEiJ_G0022517	Rbm14	100	47.899	Mus_caroli
ENSOMEG00000006508	-	93	48.980	ENSMUSG00000006456	Rbm14	100	47.899	Mus_musculus
ENSOMEG00000006508	-	93	48.980	MGP_PahariEiJ_G0014014	Rbm14	100	47.899	Mus_pahari
ENSOMEG00000006508	-	93	48.980	MGP_SPRETEiJ_G0023431	Rbm14	100	47.899	Mus_spretus
ENSOMEG00000006508	-	94	50.000	ENSNGAG00000019304	Rbm14	100	47.899	Nannospalax_galili
ENSOMEG00000006508	-	96	93.960	ENSNBRG00000004960	-	80	88.690	Neolamprologus_brichardi
ENSOMEG00000006508	-	93	48.980	ENSODEG00000017717	RBM14	100	47.899	Octodon_degus
ENSOMEG00000006508	-	96	89.333	ENSONIG00000008557	-	78	85.460	Oreochromis_niloticus
ENSOMEG00000006508	-	94	65.517	ENSONIG00000013035	rbm14b	72	57.507	Oreochromis_niloticus
ENSOMEG00000006508	-	71	48.214	ENSOANG00000001240	-	98	47.863	Ornithorhynchus_anatinus
ENSOMEG00000006508	-	94	64.138	ENSORLG00000008051	rbm14b	74	47.674	Oryzias_latipes
ENSOMEG00000006508	-	96	96.000	ENSORLG00000001900	-	78	98.137	Oryzias_latipes
ENSOMEG00000006508	-	94	64.138	ENSORLG00020005551	rbm14b	72	47.674	Oryzias_latipes_hni
ENSOMEG00000006508	-	96	96.000	ENSORLG00020019144	-	78	98.137	Oryzias_latipes_hni
ENSOMEG00000006508	-	94	63.448	ENSORLG00015022683	rbm14b	74	47.442	Oryzias_latipes_hsok
ENSOMEG00000006508	-	96	96.000	ENSORLG00015000082	-	78	97.833	Oryzias_latipes_hsok
ENSOMEG00000006508	-	92	51.948	ENSPPAG00000033403	RBM14	96	43.750	Pan_paniscus
ENSOMEG00000006508	-	93	48.980	ENSPPRG00000003716	RBM14	100	47.899	Panthera_pardus
ENSOMEG00000006508	-	92	51.948	ENSPTRG00000003934	RBM14	96	43.750	Pan_troglodytes
ENSOMEG00000006508	-	92	51.948	ENSPANG00000004924	RBM14	82	43.243	Papio_anubis
ENSOMEG00000006508	-	94	63.448	ENSPKIG00000009078	rbm14b	76	47.826	Paramormyrops_kingsleyae
ENSOMEG00000006508	-	99	81.818	ENSPMGG00000018869	-	91	85.517	Periophthalmus_magnuspinnatus
ENSOMEG00000006508	-	93	47.619	ENSPCIG00000008541	RBM14	90	47.619	Phascolarctos_cinereus
ENSOMEG00000006508	-	96	92.667	ENSPFOG00000004843	-	79	86.787	Poecilia_formosa
ENSOMEG00000006508	-	94	64.828	ENSPFOG00000003614	rbm14b	74	48.148	Poecilia_formosa
ENSOMEG00000006508	-	96	92.667	ENSPLAG00000017359	-	79	86.787	Poecilia_latipinna
ENSOMEG00000006508	-	94	64.138	ENSPLAG00000001395	rbm14b	74	47.685	Poecilia_latipinna
ENSOMEG00000006508	-	96	92.667	ENSPMEG00000004894	-	80	86.787	Poecilia_mexicana
ENSOMEG00000006508	-	94	64.828	ENSPMEG00000012911	rbm14b	74	47.685	Poecilia_mexicana
ENSOMEG00000006508	-	100	89.744	ENSPREG00000007274	-	79	86.486	Poecilia_reticulata
ENSOMEG00000006508	-	92	51.948	ENSPCOG00000016329	RBM14	100	47.899	Propithecus_coquereli
ENSOMEG00000006508	-	96	94.000	ENSPNYG00000015906	-	79	88.554	Pundamilia_nyererei
ENSOMEG00000006508	-	94	62.759	ENSPNAG00000001977	rbm14b	74	47.356	Pygocentrus_nattereri
ENSOMEG00000006508	-	97	67.550	ENSPNAG00000012473	rbm14a	74	56.793	Pygocentrus_nattereri
ENSOMEG00000006508	-	92	51.948	ENSRBIG00000043267	RBM14	96	43.750	Rhinopithecus_bieti
ENSOMEG00000006508	-	92	51.948	ENSRROG00000044302	RBM14	96	43.750	Rhinopithecus_roxellana
ENSOMEG00000006508	-	92	51.948	ENSSBOG00000031468	RBM14	100	47.899	Saimiri_boliviensis_boliviensis
ENSOMEG00000006508	-	94	62.759	ENSSFOG00015023796	rbm14b	75	48.786	Scleropages_formosus
ENSOMEG00000006508	-	94	66.207	ENSSMAG00000004522	rbm14b	70	61.111	Scophthalmus_maximus
ENSOMEG00000006508	-	96	90.000	ENSSMAG00000002055	-	80	87.651	Scophthalmus_maximus
ENSOMEG00000006508	-	96	94.000	ENSSDUG00000020756	-	80	88.393	Seriola_dumerili
ENSOMEG00000006508	-	96	94.000	ENSSLDG00000006311	-	80	87.611	Seriola_lalandi_dorsalis
ENSOMEG00000006508	-	95	93.243	ENSSPAG00000010825	-	80	88.496	Stegastes_partitus
ENSOMEG00000006508	-	93	48.980	ENSSSCG00000038008	RBM14	98	49.138	Sus_scrofa
ENSOMEG00000006508	-	100	91.026	ENSTRUG00000009504	-	74	84.478	Takifugu_rubripes
ENSOMEG00000006508	-	100	90.385	ENSTNIG00000000058	-	81	87.156	Tetraodon_nigroviridis
ENSOMEG00000006508	-	97	62.500	ENSTNIG00000006844	rbm14b	69	54.085	Tetraodon_nigroviridis
ENSOMEG00000006508	-	93	42.759	ENSXETG00000030260	-	56	44.776	Xenopus_tropicalis
ENSOMEG00000006508	-	94	92.784	ENSXCOG00000006825	-	77	85.348	Xiphophorus_couchianus
ENSOMEG00000006508	-	94	64.138	ENSXMAG00000008390	rbm14b	74	47.454	Xiphophorus_maculatus
ENSOMEG00000006508	-	96	92.667	ENSXMAG00000000338	-	80	86.787	Xiphophorus_maculatus