EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000006607 (Gene tree)
Gene ID: 112150664
Gene Symbol: swt1
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 20770 bases
Position: chrNVQA01000014.1:8171939-8192708
Accession: 112150664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005615	PIN_4	PF13638.6	1.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000007197	-	4369	-	ENSOMEP00000005615	979 (aa)	XP_024134885	UPI000CF7C4F7

Gene Model

Click here to download ENSOMEG00000006607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006607's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006607	swt1	66	33.333	ENSG00000116668	SWT1	72	33.333	Homo_sapiens
ENSOMEG00000006607	swt1	96	50.520	ENSAPOG00000014897	-	99	50.102	Acanthochromis_polyacanthus
ENSOMEG00000006607	swt1	57	35.172	ENSAMEG00000013585	SWT1	60	35.172	Ailuropoda_melanoleuca
ENSOMEG00000006607	swt1	98	49.950	ENSAOCG00000013932	swt1	98	49.900	Amphiprion_ocellaris
ENSOMEG00000006607	swt1	98	50.100	ENSAPEG00000009613	-	98	50.100	Amphiprion_percula
ENSOMEG00000006607	swt1	98	50.859	ENSATEG00000018946	swt1	98	50.810	Anabas_testudineus
ENSOMEG00000006607	swt1	57	37.979	ENSAPLG00000008607	SWT1	74	37.979	Anas_platyrhynchos
ENSOMEG00000006607	swt1	56	35.638	ENSACAG00000002276	SWT1	62	35.638	Anolis_carolinensis
ENSOMEG00000006607	swt1	66	33.237	ENSANAG00000027068	SWT1	72	33.237	Aotus_nancymaae
ENSOMEG00000006607	swt1	86	53.343	ENSACLG00000009742	swt1	97	54.021	Astatotilapia_calliptera
ENSOMEG00000006607	swt1	62	45.894	ENSAMXG00000010971	swt1	70	43.902	Astyanax_mexicanus
ENSOMEG00000006607	swt1	57	35.345	ENSCJAG00000005544	SWT1	72	32.950	Callithrix_jacchus
ENSOMEG00000006607	swt1	57	35.579	ENSCAFG00000013543	SWT1	60	35.420	Canis_familiaris
ENSOMEG00000006607	swt1	66	33.094	ENSCAFG00020015648	SWT1	76	32.997	Canis_lupus_dingo
ENSOMEG00000006607	swt1	57	34.655	ENSCHIG00000023511	SWT1	93	34.655	Capra_hircus
ENSOMEG00000006607	swt1	59	33.779	ENSTSYG00000010470	SWT1	62	34.007	Carlito_syrichta
ENSOMEG00000006607	swt1	62	32.719	ENSCPOG00000014251	SWT1	76	32.719	Cavia_porcellus
ENSOMEG00000006607	swt1	66	32.899	ENSCCAG00000033926	SWT1	72	32.899	Cebus_capucinus
ENSOMEG00000006607	swt1	57	35.529	ENSCATG00000042210	SWT1	92	35.355	Cercocebus_atys
ENSOMEG00000006607	swt1	66	32.464	ENSCLAG00000013959	SWT1	73	32.464	Chinchilla_lanigera
ENSOMEG00000006607	swt1	57	35.192	ENSCSAG00000012895	SWT1	72	32.847	Chlorocebus_sabaeus
ENSOMEG00000006607	swt1	57	36.833	ENSCPBG00000015691	SWT1	60	36.317	Chrysemys_picta_bellii
ENSOMEG00000006607	swt1	57	35.664	ENSCANG00000032207	SWT1	92	35.490	Colobus_angolensis_palliatus
ENSOMEG00000006607	swt1	68	33.714	ENSCGRG00001022955	Swt1	74	33.714	Cricetulus_griseus_chok1gshd
ENSOMEG00000006607	swt1	68	33.380	ENSCGRG00000010224	Swt1	75	33.380	Cricetulus_griseus_crigri
ENSOMEG00000006607	swt1	63	55.873	ENSCSEG00000017352	swt1	86	54.370	Cynoglossus_semilaevis
ENSOMEG00000006607	swt1	57	46.303	ENSDARG00000094010	swt1	56	46.303	Danio_rerio
ENSOMEG00000006607	swt1	59	33.727	ENSDORG00000010531	Swt1	67	33.895	Dipodomys_ordii
ENSOMEG00000006607	swt1	57	34.609	ENSEASG00005005530	SWT1	64	34.609	Equus_asinus_asinus
ENSOMEG00000006607	swt1	57	33.625	ENSECAG00000012085	SWT1	63	33.625	Equus_caballus
ENSOMEG00000006607	swt1	59	49.331	ENSELUG00000020565	swt1	58	49.668	Esox_lucius
ENSOMEG00000006607	swt1	66	32.035	ENSFCAG00000011286	SWT1	72	32.035	Felis_catus
ENSOMEG00000006607	swt1	58	35.176	ENSFALG00000003206	SWT1	63	35.176	Ficedula_albicollis
ENSOMEG00000006607	swt1	59	35.354	ENSFDAG00000007569	SWT1	63	35.354	Fukomys_damarensis
ENSOMEG00000006607	swt1	56	36.842	ENSGALG00000034230	SWT1	62	36.667	Gallus_gallus
ENSOMEG00000006607	swt1	97	48.344	ENSGAFG00000007803	-	96	48.344	Gambusia_affinis
ENSOMEG00000006607	swt1	57	36.713	ENSGAGG00000025050	SWT1	94	36.444	Gopherus_agassizii
ENSOMEG00000006607	swt1	51	35.192	ENSGGOG00000041167	-	89	35.192	Gorilla_gorilla
ENSOMEG00000006607	swt1	89	53.768	ENSHBUG00000006188	swt1	97	54.414	Haplochromis_burtoni
ENSOMEG00000006607	swt1	59	35.714	ENSHGLG00000006542	SWT1	65	35.714	Heterocephalus_glaber_female
ENSOMEG00000006607	swt1	59	35.798	ENSHGLG00100014408	SWT1	63	35.798	Heterocephalus_glaber_male
ENSOMEG00000006607	swt1	57	47.321	ENSIPUG00000009113	-	56	47.321	Ictalurus_punctatus
ENSOMEG00000006607	swt1	66	33.430	ENSSTOG00000010356	SWT1	73	33.430	Ictidomys_tridecemlineatus
ENSOMEG00000006607	swt1	57	36.632	ENSJJAG00000015927	Swt1	63	36.632	Jaculus_jaculus
ENSOMEG00000006607	swt1	99	50.252	ENSKMAG00000012533	swt1	98	50.154	Kryptolebias_marmoratus
ENSOMEG00000006607	swt1	96	47.930	ENSLBEG00000020663	-	97	47.804	Labrus_bergylta
ENSOMEG00000006607	swt1	57	38.169	ENSLACG00000009194	SWT1	79	38.169	Latimeria_chalumnae
ENSOMEG00000006607	swt1	56	42.981	ENSLOCG00000001749	swt1	97	42.908	Lepisosteus_oculatus
ENSOMEG00000006607	swt1	59	33.388	ENSLAFG00000004346	-	96	33.388	Loxodonta_africana
ENSOMEG00000006607	swt1	57	35.355	ENSMFAG00000031793	SWT1	93	35.182	Macaca_fascicularis
ENSOMEG00000006607	swt1	56	34.880	ENSMMUG00000013882	SWT1	92	34.211	Macaca_mulatta
ENSOMEG00000006607	swt1	57	35.529	ENSMNEG00000035502	SWT1	93	35.182	Macaca_nemestrina
ENSOMEG00000006607	swt1	57	35.163	ENSMLEG00000038692	SWT1	92	34.872	Mandrillus_leucophaeus
ENSOMEG00000006607	swt1	89	53.768	ENSMZEG00005018489	swt1	97	54.414	Maylandia_zebra
ENSOMEG00000006607	swt1	56	37.031	ENSMGAG00000000973	SWT1	93	37.031	Meleagris_gallopavo
ENSOMEG00000006607	swt1	59	32.818	ENSMAUG00000007996	Swt1	59	32.818	Mesocricetus_auratus
ENSOMEG00000006607	swt1	57	35.144	ENSMICG00000014975	SWT1	60	35.144	Microcebus_murinus
ENSOMEG00000006607	swt1	59	36.256	ENSMOCG00000009776	Swt1	62	36.256	Microtus_ochrogaster
ENSOMEG00000006607	swt1	58	33.791	ENSMODG00000007472	SWT1	61	33.791	Monodelphis_domestica
ENSOMEG00000006607	swt1	97	48.640	ENSMALG00000019308	swt1	97	48.640	Monopterus_albus
ENSOMEG00000006607	swt1	57	35.605	MGP_CAROLIEiJ_G0014692	Swt1	66	43.713	Mus_caroli
ENSOMEG00000006607	swt1	57	35.223	ENSMUSG00000052748	Swt1	66	42.515	Mus_musculus
ENSOMEG00000006607	swt1	59	35.041	MGP_PahariEiJ_G0027928	Swt1	66	42.515	Mus_pahari
ENSOMEG00000006607	swt1	57	35.345	MGP_SPRETEiJ_G0015499	Swt1	66	43.114	Mus_spretus
ENSOMEG00000006607	swt1	66	32.362	ENSMPUG00000011913	SWT1	72	32.362	Mustela_putorius_furo
ENSOMEG00000006607	swt1	57	34.370	ENSMLUG00000001142	SWT1	59	34.370	Myotis_lucifugus
ENSOMEG00000006607	swt1	57	35.678	ENSNGAG00000021080	Swt1	60	35.678	Nannospalax_galili
ENSOMEG00000006607	swt1	57	35.284	ENSNLEG00000018031	SWT1	60	35.284	Nomascus_leucogenys
ENSOMEG00000006607	swt1	80	59.832	ENSONIG00000009994	swt1	98	55.615	Oreochromis_niloticus
ENSOMEG00000006607	swt1	57	34.072	ENSOANG00000001013	-	70	34.197	Ornithorhynchus_anatinus
ENSOMEG00000006607	swt1	66	32.632	ENSOCUG00000004901	SWT1	72	32.632	Oryctolagus_cuniculus
ENSOMEG00000006607	swt1	99	71.643	ENSORLG00000009682	swt1	98	71.575	Oryzias_latipes
ENSOMEG00000006607	swt1	99	71.805	ENSORLG00020011654	swt1	98	71.677	Oryzias_latipes_hni
ENSOMEG00000006607	swt1	99	71.443	ENSORLG00015007734	swt1	98	71.779	Oryzias_latipes_hsok
ENSOMEG00000006607	swt1	57	36.615	ENSOGAG00000016195	SWT1	60	36.615	Otolemur_garnettii
ENSOMEG00000006607	swt1	57	34.321	ENSOARG00000004156	SWT1	59	34.321	Ovis_aries
ENSOMEG00000006607	swt1	66	33.043	ENSPPAG00000021400	SWT1	73	33.047	Pan_paniscus
ENSOMEG00000006607	swt1	66	32.323	ENSPPRG00000023754	SWT1	72	32.323	Panthera_pardus
ENSOMEG00000006607	swt1	66	32.323	ENSPTIG00000021889	SWT1	72	32.075	Panthera_tigris_altaica
ENSOMEG00000006607	swt1	66	33.188	ENSPTRG00000001777	SWT1	73	33.190	Pan_troglodytes
ENSOMEG00000006607	swt1	57	34.957	ENSPANG00000005099	SWT1	92	34.783	Papio_anubis
ENSOMEG00000006607	swt1	60	46.399	ENSPKIG00000005979	swt1	62	46.103	Paramormyrops_kingsleyae
ENSOMEG00000006607	swt1	57	37.069	ENSPSIG00000008961	SWT1	60	37.069	Pelodiscus_sinensis
ENSOMEG00000006607	swt1	59	34.891	ENSPEMG00000008208	Swt1	61	34.891	Peromyscus_maniculatus_bairdii
ENSOMEG00000006607	swt1	58	34.110	ENSPCIG00000002443	SWT1	61	34.110	Phascolarctos_cinereus
ENSOMEG00000006607	swt1	99	48.703	ENSPFOG00000010988	-	92	58.569	Poecilia_formosa
ENSOMEG00000006607	swt1	99	48.754	ENSPLAG00000022908	-	96	49.020	Poecilia_latipinna
ENSOMEG00000006607	swt1	99	48.557	ENSPMEG00000006943	-	96	48.816	Poecilia_mexicana
ENSOMEG00000006607	swt1	65	45.092	ENSPREG00000014723	-	83	45.307	Poecilia_reticulata
ENSOMEG00000006607	swt1	66	33.142	ENSPPYG00000000415	SWT1	72	33.142	Pongo_abelii
ENSOMEG00000006607	swt1	57	32.522	ENSPVAG00000005968	SWT1	60	32.522	Pteropus_vampyrus
ENSOMEG00000006607	swt1	89	53.768	ENSPNYG00000012934	swt1	97	54.414	Pundamilia_nyererei
ENSOMEG00000006607	swt1	67	44.807	ENSPNAG00000017795	swt1	69	44.807	Pygocentrus_nattereri
ENSOMEG00000006607	swt1	66	34.835	ENSRNOG00000032258	Swt1	72	33.913	Rattus_norvegicus
ENSOMEG00000006607	swt1	66	32.653	ENSRBIG00000040630	SWT1	92	34.851	Rhinopithecus_bieti
ENSOMEG00000006607	swt1	66	33.086	ENSSBOG00000028825	SWT1	72	32.899	Saimiri_boliviensis_boliviensis
ENSOMEG00000006607	swt1	57	35.294	ENSSHAG00000009241	SWT1	60	35.294	Sarcophilus_harrisii
ENSOMEG00000006607	swt1	57	47.803	ENSSFOG00015004895	swt1	55	47.803	Scleropages_formosus
ENSOMEG00000006607	swt1	88	48.013	ENSSMAG00000020761	-	91	48.759	Scophthalmus_maximus
ENSOMEG00000006607	swt1	98	51.324	ENSSDUG00000012345	swt1	98	51.426	Seriola_dumerili
ENSOMEG00000006607	swt1	98	51.574	ENSSLDG00000003821	swt1	98	51.574	Seriola_lalandi_dorsalis
ENSOMEG00000006607	swt1	57	36.806	ENSSPUG00000003899	SWT1	60	36.806	Sphenodon_punctatus
ENSOMEG00000006607	swt1	98	51.168	ENSSPAG00000001030	swt1	98	51.220	Stegastes_partitus
ENSOMEG00000006607	swt1	66	33.681	ENSSSCG00000015569	SWT1	72	33.830	Sus_scrofa
ENSOMEG00000006607	swt1	57	37.108	ENSTGUG00000003718	-	98	37.108	Taeniopygia_guttata
ENSOMEG00000006607	swt1	57	57.651	ENSTRUG00000006420	swt1	61	57.651	Takifugu_rubripes
ENSOMEG00000006607	swt1	57	33.681	ENSTTRG00000005914	SWT1	60	33.681	Tursiops_truncatus
ENSOMEG00000006607	swt1	57	35.000	ENSUAMG00000020937	SWT1	65	35.000	Ursus_americanus
ENSOMEG00000006607	swt1	57	35.000	ENSUMAG00000021918	SWT1	61	34.821	Ursus_maritimus
ENSOMEG00000006607	swt1	57	35.751	ENSVVUG00000009182	SWT1	62	35.751	Vulpes_vulpes
ENSOMEG00000006607	swt1	99	48.252	ENSXMAG00000023472	-	98	47.826	Xiphophorus_maculatus