EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000006636 (Gene tree)
Gene ID: 112144905
Gene Symbol: patz1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 13979 bases
Position: chrNVQA01000009.1:3896878-3910856
Accession: 112144905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000025417	zf-C2H2	PF00096.26	2.6e-30	1	4
ENSOMEP00000025417	zf-C2H2	PF00096.26	2.6e-30	2	4
ENSOMEP00000025417	zf-C2H2	PF00096.26	2.6e-30	3	4
ENSOMEP00000025417	zf-C2H2	PF00096.26	2.6e-30	4	4
ENSOMEP00000025439	zf-C2H2	PF00096.26	4.7e-23	1	3
ENSOMEP00000025439	zf-C2H2	PF00096.26	4.7e-23	2	3
ENSOMEP00000025439	zf-C2H2	PF00096.26	4.7e-23	3	3
ENSOMEP00000025417	zf-met	PF12874.7	9.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000007179	-	2103	-	ENSOMEP00000025417	700 (aa)	-	-
ENSOMET00000007158	-	4376	-	ENSOMEP00000025439	641 (aa)	XP_024125549	UPI000CF83D78

Gene Model

Click here to download ENSOMEG00000006636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006636's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000006636	patz1	58	34.468	ENSOMEG00000023652	-	99	39.759
ENSOMEG00000006636	patz1	50	36.782	ENSOMEG00000012263	-	60	35.227
ENSOMEG00000006636	patz1	61	34.899	ENSOMEG00000018871	-	64	34.899
ENSOMEG00000006636	patz1	50	31.677	ENSOMEG00000011876	-	66	37.349
ENSOMEG00000006636	patz1	53	30.992	ENSOMEG00000016463	-	70	30.992
ENSOMEG00000006636	patz1	63	31.111	ENSOMEG00000014364	-	96	31.111
ENSOMEG00000006636	patz1	50	31.280	ENSOMEG00000021518	-	94	33.333
ENSOMEG00000006636	patz1	55	32.680	ENSOMEG00000010398	-	76	33.735
ENSOMEG00000006636	patz1	59	33.548	ENSOMEG00000016295	-	78	31.489
ENSOMEG00000006636	patz1	50	33.730	ENSOMEG00000023102	-	79	41.818
ENSOMEG00000006636	patz1	52	30.396	ENSOMEG00000017673	-	67	32.727
ENSOMEG00000006636	patz1	50	40.000	ENSOMEG00000009071	-	86	39.877
ENSOMEG00000006636	patz1	59	32.283	ENSOMEG00000019519	-	84	32.283
ENSOMEG00000006636	patz1	50	37.719	ENSOMEG00000002268	-	84	37.762
ENSOMEG00000006636	patz1	52	33.987	ENSOMEG00000018597	-	85	35.294
ENSOMEG00000006636	patz1	50	31.140	ENSOMEG00000008352	-	72	33.476
ENSOMEG00000006636	patz1	53	31.288	ENSOMEG00000000342	-	59	35.465
ENSOMEG00000006636	patz1	62	35.223	ENSOMEG00000010371	-	97	34.302
ENSOMEG00000006636	patz1	72	36.441	ENSOMEG00000011926	zbtb17	79	36.752
ENSOMEG00000006636	patz1	52	32.773	ENSOMEG00000018752	hic2	53	37.500
ENSOMEG00000006636	patz1	50	33.987	ENSOMEG00000023777	-	94	35.374
ENSOMEG00000006636	patz1	61	34.054	ENSOMEG00000022620	-	99	34.054
ENSOMEG00000006636	patz1	61	31.193	ENSOMEG00000017762	zbtb48	90	31.193
ENSOMEG00000006636	patz1	54	33.775	ENSOMEG00000021676	-	79	34.444
ENSOMEG00000006636	patz1	60	31.214	ENSOMEG00000010068	-	65	36.975
ENSOMEG00000006636	patz1	62	35.294	ENSOMEG00000019179	-	87	35.294
ENSOMEG00000006636	patz1	61	32.500	ENSOMEG00000019379	-	70	36.111
ENSOMEG00000006636	patz1	60	33.945	ENSOMEG00000007495	-	80	33.945
ENSOMEG00000006636	patz1	62	31.551	ENSOMEG00000010575	zgc:66448	64	32.057
ENSOMEG00000006636	patz1	50	32.237	ENSOMEG00000021134	-	52	33.621
ENSOMEG00000006636	patz1	69	31.967	ENSOMEG00000019853	-	91	32.174
ENSOMEG00000006636	patz1	54	40.952	ENSOMEG00000016018	bcl6ab	54	31.765
ENSOMEG00000006636	patz1	60	33.871	ENSOMEG00000011566	-	91	33.871
ENSOMEG00000006636	patz1	60	34.783	ENSOMEG00000009816	-	99	32.759
ENSOMEG00000006636	patz1	56	30.698	ENSOMEG00000012539	-	97	31.073
ENSOMEG00000006636	patz1	67	32.660	ENSOMEG00000005143	prdm5	72	32.660
ENSOMEG00000006636	patz1	59	33.133	ENSOMEG00000010638	-	88	31.818
ENSOMEG00000006636	patz1	61	30.932	ENSOMEG00000005156	-	92	31.799
ENSOMEG00000006636	patz1	51	30.061	ENSOMEG00000010745	-	79	35.862
ENSOMEG00000006636	patz1	60	33.929	ENSOMEG00000012844	-	89	31.739
ENSOMEG00000006636	patz1	71	34.127	ENSOMEG00000006807	zbtb41	62	34.127
ENSOMEG00000006636	patz1	57	31.579	ENSOMEG00000022915	-	86	37.576
ENSOMEG00000006636	patz1	59	39.655	ENSOMEG00000004586	-	96	39.655
ENSOMEG00000006636	patz1	59	32.174	ENSOMEG00000005839	-	75	32.174
ENSOMEG00000006636	patz1	56	32.184	ENSOMEG00000014882	-	81	34.646
ENSOMEG00000006636	patz1	54	32.031	ENSOMEG00000013244	-	94	30.488
ENSOMEG00000006636	patz1	57	33.051	ENSOMEG00000001622	-	81	34.583
ENSOMEG00000006636	patz1	62	31.795	ENSOMEG00000010078	-	73	31.795
ENSOMEG00000006636	patz1	58	36.242	ENSOMEG00000023774	-	61	37.952
ENSOMEG00000006636	patz1	50	30.769	ENSOMEG00000018508	-	74	34.722
ENSOMEG00000006636	patz1	60	38.596	ENSOMEG00000013158	-	73	38.596
ENSOMEG00000006636	patz1	52	31.293	ENSOMEG00000018691	-	78	30.435
ENSOMEG00000006636	patz1	50	30.556	ENSOMEG00000013677	-	87	31.050
ENSOMEG00000006636	patz1	54	30.412	ENSOMEG00000012273	-	71	32.468
ENSOMEG00000006636	patz1	53	36.875	ENSOMEG00000023820	-	84	36.875
ENSOMEG00000006636	patz1	59	35.057	ENSOMEG00000022322	-	71	35.057
ENSOMEG00000006636	patz1	62	31.780	ENSOMEG00000003451	-	72	31.780
ENSOMEG00000006636	patz1	50	33.889	ENSOMEG00000015179	-	63	33.333
ENSOMEG00000006636	patz1	54	30.688	ENSOMEG00000021945	-	90	40.351
ENSOMEG00000006636	patz1	53	31.667	ENSOMEG00000020951	-	80	34.104
ENSOMEG00000006636	patz1	50	31.365	ENSOMEG00000018485	-	65	36.413
ENSOMEG00000006636	patz1	52	33.175	ENSOMEG00000022975	-	60	34.826
ENSOMEG00000006636	patz1	56	32.547	ENSOMEG00000016026	-	63	39.815
ENSOMEG00000006636	patz1	61	31.405	ENSOMEG00000002639	-	98	31.276
ENSOMEG00000006636	patz1	55	33.728	ENSOMEG00000004087	-	64	37.500
ENSOMEG00000006636	patz1	64	33.108	ENSOMEG00000016779	-	71	33.108
ENSOMEG00000006636	patz1	56	30.570	ENSOMEG00000021420	-	62	34.118
ENSOMEG00000006636	patz1	50	30.508	ENSOMEG00000003372	-	94	31.739
ENSOMEG00000006636	patz1	59	33.475	ENSOMEG00000008449	-	99	33.475
ENSOMEG00000006636	patz1	63	31.492	ENSOMEG00000000630	-	68	31.492
ENSOMEG00000006636	patz1	59	31.727	ENSOMEG00000023331	-	91	35.429
ENSOMEG00000006636	patz1	67	34.783	ENSOMEG00000000112	zbtb16b	61	34.783
ENSOMEG00000006636	patz1	70	31.933	ENSOMEG00000002434	zbtb16a	62	31.933
ENSOMEG00000006636	patz1	68	34.783	ENSOMEG00000023744	-	99	34.783
ENSOMEG00000006636	patz1	56	37.179	ENSOMEG00000018262	-	96	36.207
ENSOMEG00000006636	patz1	54	30.542	ENSOMEG00000014676	-	96	36.184
ENSOMEG00000006636	patz1	54	30.457	ENSOMEG00000015103	-	81	34.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006636	patz1	100	57.459	ENSG00000100105	PATZ1	100	57.459	Homo_sapiens
ENSOMEG00000006636	patz1	100	86.235	ENSAPOG00000018447	patz1	100	86.235	Acanthochromis_polyacanthus
ENSOMEG00000006636	patz1	100	54.028	ENSAMEG00000007074	PATZ1	100	54.103	Ailuropoda_melanoleuca
ENSOMEG00000006636	patz1	100	83.425	ENSACIG00000016779	patz1	100	83.425	Amphilophus_citrinellus
ENSOMEG00000006636	patz1	100	84.992	ENSAPEG00000013354	patz1	100	84.992	Amphiprion_percula
ENSOMEG00000006636	patz1	100	84.490	ENSATEG00000011260	patz1	100	84.490	Anabas_testudineus
ENSOMEG00000006636	patz1	87	53.074	ENSAPLG00000003934	PATZ1	99	53.074	Anas_platyrhynchos
ENSOMEG00000006636	patz1	100	57.459	ENSANAG00000029603	PATZ1	100	57.459	Aotus_nancymaae
ENSOMEG00000006636	patz1	100	68.638	ENSAMXG00000002273	patz1	100	68.587	Astyanax_mexicanus
ENSOMEG00000006636	patz1	100	57.312	ENSBTAG00000005478	PATZ1	100	57.312	Bos_taurus
ENSOMEG00000006636	patz1	100	57.459	ENSCJAG00000010978	PATZ1	100	57.459	Callithrix_jacchus
ENSOMEG00000006636	patz1	100	57.312	ENSCAFG00000013087	PATZ1	99	57.312	Canis_familiaris
ENSOMEG00000006636	patz1	100	57.607	ENSCHIG00000020203	PATZ1	100	60.792	Capra_hircus
ENSOMEG00000006636	patz1	100	57.607	ENSTSYG00000033183	PATZ1	100	57.607	Carlito_syrichta
ENSOMEG00000006636	patz1	100	57.459	ENSCCAG00000028772	PATZ1	100	57.459	Cebus_capucinus
ENSOMEG00000006636	patz1	100	57.459	ENSCATG00000006101	PATZ1	100	57.459	Cercocebus_atys
ENSOMEG00000006636	patz1	100	55.319	ENSCPBG00000011277	PATZ1	100	57.985	Chrysemys_picta_bellii
ENSOMEG00000006636	patz1	100	57.459	ENSCANG00000024972	PATZ1	100	57.459	Colobus_angolensis_palliatus
ENSOMEG00000006636	patz1	100	55.982	ENSCGRG00001004071	Patz1	100	55.982	Cricetulus_griseus_chok1gshd
ENSOMEG00000006636	patz1	93	56.082	ENSCGRG00000004814	Patz1	100	56.082	Cricetulus_griseus_crigri
ENSOMEG00000006636	patz1	100	73.117	ENSCSEG00000001385	patz1	99	76.234	Cynoglossus_semilaevis
ENSOMEG00000006636	patz1	100	84.389	ENSCVAG00000007684	patz1	100	84.332	Cyprinodon_variegatus
ENSOMEG00000006636	patz1	100	68.238	ENSDARG00000076584	patz1	100	69.684	Danio_rerio
ENSOMEG00000006636	patz1	89	53.560	ENSDNOG00000003183	PATZ1	100	53.560	Dasypus_novemcinctus
ENSOMEG00000006636	patz1	100	57.459	ENSDORG00000023834	Patz1	100	57.459	Dipodomys_ordii
ENSOMEG00000006636	patz1	100	57.459	ENSECAG00000025030	PATZ1	100	57.459	Equus_caballus
ENSOMEG00000006636	patz1	100	73.705	ENSELUG00000002333	patz1	100	73.705	Esox_lucius
ENSOMEG00000006636	patz1	100	57.312	ENSFCAG00000030253	PATZ1	100	57.312	Felis_catus
ENSOMEG00000006636	patz1	89	59.653	ENSFALG00000007450	PATZ1	100	53.365	Ficedula_albicollis
ENSOMEG00000006636	patz1	96	50.938	ENSFDAG00000005614	PATZ1	99	58.145	Fukomys_damarensis
ENSOMEG00000006636	patz1	100	83.871	ENSFHEG00000014755	patz1	100	86.000	Fundulus_heteroclitus
ENSOMEG00000006636	patz1	100	66.571	ENSGMOG00000001062	patz1	100	66.714	Gadus_morhua
ENSOMEG00000006636	patz1	100	53.224	ENSGALG00000006934	PATZ1	100	53.699	Gallus_gallus
ENSOMEG00000006636	patz1	100	85.208	ENSGAFG00000010053	patz1	100	86.133	Gambusia_affinis
ENSOMEG00000006636	patz1	87	55.760	ENSGAGG00000003214	PATZ1	100	55.760	Gopherus_agassizii
ENSOMEG00000006636	patz1	100	57.459	ENSGGOG00000017171	PATZ1	100	57.459	Gorilla_gorilla
ENSOMEG00000006636	patz1	99	79.261	ENSHCOG00000017644	patz1	99	73.628	Hippocampus_comes
ENSOMEG00000006636	patz1	100	67.339	ENSIPUG00000017653	patz1	99	67.339	Ictalurus_punctatus
ENSOMEG00000006636	patz1	100	57.312	ENSSTOG00000020707	PATZ1	100	57.312	Ictidomys_tridecemlineatus
ENSOMEG00000006636	patz1	100	57.101	ENSJJAG00000015259	Patz1	100	57.101	Jaculus_jaculus
ENSOMEG00000006636	patz1	100	77.727	ENSKMAG00000008157	patz1	100	83.486	Kryptolebias_marmoratus
ENSOMEG00000006636	patz1	100	54.958	ENSLAFG00000002317	PATZ1	100	54.958	Loxodonta_africana
ENSOMEG00000006636	patz1	100	57.607	ENSMFAG00000040968	PATZ1	100	57.755	Macaca_fascicularis
ENSOMEG00000006636	patz1	100	57.607	ENSMNEG00000037588	PATZ1	100	57.755	Macaca_nemestrina
ENSOMEG00000006636	patz1	100	57.459	ENSMLEG00000030938	PATZ1	100	57.459	Mandrillus_leucophaeus
ENSOMEG00000006636	patz1	100	83.614	ENSMAMG00000023652	patz1	100	83.614	Mastacembelus_armatus
ENSOMEG00000006636	patz1	88	50.565	ENSMGAG00000008439	PATZ1	100	50.565	Meleagris_gallopavo
ENSOMEG00000006636	patz1	100	57.459	ENSMAUG00000004129	Patz1	100	57.459	Mesocricetus_auratus
ENSOMEG00000006636	patz1	100	57.755	ENSMICG00000005430	PATZ1	100	57.903	Microcebus_murinus
ENSOMEG00000006636	patz1	100	57.164	ENSMOCG00000014488	Patz1	100	57.164	Microtus_ochrogaster
ENSOMEG00000006636	patz1	100	77.931	ENSMMOG00000021679	patz1	100	77.931	Mola_mola
ENSOMEG00000006636	patz1	100	81.623	ENSMALG00000021172	patz1	100	82.158	Monopterus_albus
ENSOMEG00000006636	patz1	100	57.879	MGP_CAROLIEiJ_G0016007	Patz1	100	57.879	Mus_caroli
ENSOMEG00000006636	patz1	100	57.755	ENSMUSG00000020453	Patz1	100	57.755	Mus_musculus
ENSOMEG00000006636	patz1	100	57.755	MGP_PahariEiJ_G0016884	Patz1	100	57.755	Mus_pahari
ENSOMEG00000006636	patz1	100	57.755	MGP_SPRETEiJ_G0016846	Patz1	99	60.792	Mus_spretus
ENSOMEG00000006636	patz1	100	57.312	ENSMLUG00000009942	PATZ1	100	57.312	Myotis_lucifugus
ENSOMEG00000006636	patz1	100	57.312	ENSNGAG00000010268	Patz1	100	57.312	Nannospalax_galili
ENSOMEG00000006636	patz1	100	83.840	ENSNBRG00000016032	patz1	100	83.840	Neolamprologus_brichardi
ENSOMEG00000006636	patz1	72	67.114	ENSMEUG00000016293	PATZ1	91	54.867	Notamacropus_eugenii
ENSOMEG00000006636	patz1	100	57.817	ENSODEG00000003589	PATZ1	100	57.817	Octodon_degus
ENSOMEG00000006636	patz1	100	85.168	ENSONIG00000004248	patz1	100	85.168	Oreochromis_niloticus
ENSOMEG00000006636	patz1	100	58.855	ENSOANG00000014654	PATZ1	100	54.749	Ornithorhynchus_anatinus
ENSOMEG00000006636	patz1	100	93.056	ENSORLG00020010937	patz1	100	93.056	Oryzias_latipes_hni
ENSOMEG00000006636	patz1	100	93.653	ENSORLG00015007396	patz1	100	93.653	Oryzias_latipes_hsok
ENSOMEG00000006636	patz1	100	54.103	ENSOGAG00000027905	PATZ1	100	54.103	Otolemur_garnettii
ENSOMEG00000006636	patz1	100	57.459	ENSPPAG00000033227	PATZ1	100	57.459	Pan_paniscus
ENSOMEG00000006636	patz1	100	57.312	ENSPPRG00000001573	PATZ1	100	57.312	Panthera_pardus
ENSOMEG00000006636	patz1	88	53.312	ENSPTIG00000007937	PATZ1	91	53.291	Panthera_tigris_altaica
ENSOMEG00000006636	patz1	100	57.459	ENSPTRG00000014268	PATZ1	100	57.459	Pan_troglodytes
ENSOMEG00000006636	patz1	100	57.459	ENSPANG00000006821	PATZ1	98	57.459	Papio_anubis
ENSOMEG00000006636	patz1	100	70.392	ENSPKIG00000019584	patz1	100	70.392	Paramormyrops_kingsleyae
ENSOMEG00000006636	patz1	71	76.056	ENSPSIG00000011562	-	89	76.056	Pelodiscus_sinensis
ENSOMEG00000006636	patz1	57	59.467	ENSPSIG00000016553	-	90	58.481	Pelodiscus_sinensis
ENSOMEG00000006636	patz1	100	73.343	ENSPMGG00000010196	patz1	100	73.343	Periophthalmus_magnuspinnatus
ENSOMEG00000006636	patz1	100	57.459	ENSPEMG00000005321	Patz1	100	57.459	Peromyscus_maniculatus_bairdii
ENSOMEG00000006636	patz1	100	84.615	ENSPLAG00000010425	patz1	100	85.538	Poecilia_latipinna
ENSOMEG00000006636	patz1	100	84.746	ENSPMEG00000000255	patz1	100	85.670	Poecilia_mexicana
ENSOMEG00000006636	patz1	100	79.942	ENSPREG00000002440	patz1	100	80.814	Poecilia_reticulata
ENSOMEG00000006636	patz1	100	53.964	ENSPPYG00000011732	PATZ1	100	53.964	Pongo_abelii
ENSOMEG00000006636	patz1	100	57.755	ENSPCOG00000019729	PATZ1	100	57.903	Propithecus_coquereli
ENSOMEG00000006636	patz1	100	53.825	ENSPVAG00000001749	PATZ1	100	53.825	Pteropus_vampyrus
ENSOMEG00000006636	patz1	100	85.299	ENSPNYG00000013542	patz1	100	85.299	Pundamilia_nyererei
ENSOMEG00000006636	patz1	87	58.637	ENSPNAG00000017222	patz1	100	58.637	Pygocentrus_nattereri
ENSOMEG00000006636	patz1	100	57.459	ENSRBIG00000044231	PATZ1	100	57.459	Rhinopithecus_bieti
ENSOMEG00000006636	patz1	100	57.459	ENSRROG00000037155	PATZ1	100	57.459	Rhinopithecus_roxellana
ENSOMEG00000006636	patz1	100	57.459	ENSSBOG00000003894	PATZ1	100	57.459	Saimiri_boliviensis_boliviensis
ENSOMEG00000006636	patz1	84	96.154	ENSSFOG00015013244	patz1	78	96.154	Scleropages_formosus
ENSOMEG00000006636	patz1	51	98.204	ENSSMAG00000020844	patz1	75	89.167	Scophthalmus_maximus
ENSOMEG00000006636	patz1	99	54.676	ENSSPUG00000015298	PATZ1	97	57.885	Sphenodon_punctatus
ENSOMEG00000006636	patz1	87	57.343	ENSSSCG00000010027	PATZ1	100	57.343	Sus_scrofa
ENSOMEG00000006636	patz1	100	76.547	ENSTRUG00000015366	patz1	100	76.547	Takifugu_rubripes
ENSOMEG00000006636	patz1	100	53.686	ENSTTRG00000010279	PATZ1	100	53.686	Tursiops_truncatus
ENSOMEG00000006636	patz1	100	57.312	ENSUAMG00000015014	PATZ1	100	57.312	Ursus_americanus
ENSOMEG00000006636	patz1	100	52.882	ENSXETG00000004190	patz1	100	53.680	Xenopus_tropicalis
ENSOMEG00000006636	patz1	100	85.362	ENSXMAG00000015531	patz1	100	86.287	Xiphophorus_maculatus