EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000006666 (Gene tree)
Gene ID: 112160182
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 17793 bases
Position: chrNVQA01000025.1:3164888-3182680
Accession: 112160182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005661	RNase_Zc3h12a	PF11977.8	5.1e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000007106	-	7121	-	ENSOMEP00000005661	922 (aa)	XP_024150349	UPI000CF82408

Gene Model

Click here to download ENSOMEG00000006666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000006666	-	85	47.174	ENSOMEG00000018642	-	97	46.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006666	-	83	49.091	ENSAPOG00000001632	-	96	67.172	Acanthochromis_polyacanthus
ENSOMEG00000006666	-	80	78.439	ENSAPOG00000015355	-	82	77.291	Acanthochromis_polyacanthus
ENSOMEG00000006666	-	100	65.856	ENSACIG00000001362	-	97	67.338	Amphilophus_citrinellus
ENSOMEG00000006666	-	99	78.794	ENSAOCG00000003866	-	98	85.878	Amphiprion_ocellaris
ENSOMEG00000006666	-	72	77.259	ENSAPEG00000018582	-	99	76.822	Amphiprion_percula
ENSOMEG00000006666	-	100	73.973	ENSAPEG00000005727	-	99	83.000	Amphiprion_percula
ENSOMEG00000006666	-	83	48.843	ENSATEG00000002260	-	83	79.574	Anabas_testudineus
ENSOMEG00000006666	-	100	75.334	ENSATEG00000004134	-	100	75.000	Anabas_testudineus
ENSOMEG00000006666	-	64	53.226	ENSACLG00000018493	-	99	44.456	Astatotilapia_calliptera
ENSOMEG00000006666	-	100	77.098	ENSACLG00000027924	-	100	76.971	Astatotilapia_calliptera
ENSOMEG00000006666	-	85	73.382	ENSCSEG00000010073	-	99	73.138	Cynoglossus_semilaevis
ENSOMEG00000006666	-	99	43.603	ENSCSEG00000008542	-	99	43.769	Cynoglossus_semilaevis
ENSOMEG00000006666	-	100	73.862	ENSCVAG00000002328	-	100	73.701	Cyprinodon_variegatus
ENSOMEG00000006666	-	66	55.520	ENSELUG00000005470	-	100	47.672	Esox_lucius
ENSOMEG00000006666	-	84	58.291	ENSELUG00000009319	-	95	57.683	Esox_lucius
ENSOMEG00000006666	-	92	85.417	ENSFHEG00000021225	-	100	71.262	Fundulus_heteroclitus
ENSOMEG00000006666	-	72	45.203	ENSGMOG00000017975	-	76	63.248	Gadus_morhua
ENSOMEG00000006666	-	100	71.519	ENSGAFG00000005290	-	100	70.347	Gambusia_affinis
ENSOMEG00000006666	-	72	46.132	ENSGACG00000001339	-	99	45.402	Gasterosteus_aculeatus
ENSOMEG00000006666	-	72	69.424	ENSGACG00000014201	-	100	69.129	Gasterosteus_aculeatus
ENSOMEG00000006666	-	100	76.471	ENSHBUG00000006831	-	100	76.763	Haplochromis_burtoni
ENSOMEG00000006666	-	100	60.339	ENSHCOG00000008878	-	100	59.744	Hippocampus_comes
ENSOMEG00000006666	-	100	74.603	ENSKMAG00000011694	-	100	73.523	Kryptolebias_marmoratus
ENSOMEG00000006666	-	97	72.941	ENSLBEG00000012554	-	99	78.670	Labrus_bergylta
ENSOMEG00000006666	-	86	47.944	ENSLBEG00000012710	-	99	46.336	Labrus_bergylta
ENSOMEG00000006666	-	100	73.231	ENSLBEG00000003547	-	100	72.103	Labrus_bergylta
ENSOMEG00000006666	-	99	44.036	ENSMAMG00000020372	-	99	43.373	Mastacembelus_armatus
ENSOMEG00000006666	-	100	67.479	ENSMAMG00000021794	-	94	86.928	Mastacembelus_armatus
ENSOMEG00000006666	-	64	53.496	ENSMZEG00005019137	-	85	71.034	Maylandia_zebra
ENSOMEG00000006666	-	100	77.098	ENSMZEG00005007718	-	100	76.971	Maylandia_zebra
ENSOMEG00000006666	-	94	72.961	ENSMMOG00000005728	-	99	76.650	Mola_mola
ENSOMEG00000006666	-	99	43.235	ENSMMOG00000019526	-	93	42.886	Mola_mola
ENSOMEG00000006666	-	100	73.891	ENSMALG00000010501	-	100	72.774	Monopterus_albus
ENSOMEG00000006666	-	100	76.995	ENSNBRG00000006978	-	100	76.867	Neolamprologus_brichardi
ENSOMEG00000006666	-	64	51.613	ENSNBRG00000012175	-	85	71.724	Neolamprologus_brichardi
ENSOMEG00000006666	-	100	76.812	ENSONIG00000012268	-	100	77.411	Oreochromis_niloticus
ENSOMEG00000006666	-	100	77.838	ENSORLG00000029243	-	99	90.211	Oryzias_latipes
ENSOMEG00000006666	-	100	88.242	ENSORLG00020017005	-	100	88.350	Oryzias_latipes_hni
ENSOMEG00000006666	-	100	87.918	ENSORLG00015015211	-	100	88.134	Oryzias_latipes_hsok
ENSOMEG00000006666	-	65	76.656	ENSPMGG00000009790	-	97	77.287	Periophthalmus_magnuspinnatus
ENSOMEG00000006666	-	100	73.890	ENSPLAG00000009867	-	100	72.088	Poecilia_latipinna
ENSOMEG00000006666	-	100	74.101	ENSPMEG00000006624	-	100	72.071	Poecilia_mexicana
ENSOMEG00000006666	-	83	47.914	ENSPMEG00000011676	-	80	51.753	Poecilia_mexicana
ENSOMEG00000006666	-	98	44.068	ENSPREG00000001607	-	73	77.974	Poecilia_reticulata
ENSOMEG00000006666	-	100	73.629	ENSPREG00000010838	-	100	73.093	Poecilia_reticulata
ENSOMEG00000006666	-	100	75.959	ENSSMAG00000007545	-	100	75.417	Scophthalmus_maximus
ENSOMEG00000006666	-	83	50.061	ENSSMAG00000007258	-	83	49.818	Scophthalmus_maximus
ENSOMEG00000006666	-	84	50.788	ENSSDUG00000013237	-	89	67.785	Seriola_dumerili
ENSOMEG00000006666	-	100	76.797	ENSSDUG00000021864	-	100	75.873	Seriola_dumerili
ENSOMEG00000006666	-	100	76.049	ENSSLDG00000012268	-	100	75.873	Seriola_lalandi_dorsalis
ENSOMEG00000006666	-	85	50.000	ENSSLDG00000004886	-	85	50.538	Seriola_lalandi_dorsalis
ENSOMEG00000006666	-	86	49.102	ENSSPAG00000001850	-	99	45.035	Stegastes_partitus
ENSOMEG00000006666	-	100	77.026	ENSSPAG00000009485	-	100	77.184	Stegastes_partitus
ENSOMEG00000006666	-	99	71.008	ENSTRUG00000022519	-	99	71.172	Takifugu_rubripes
ENSOMEG00000006666	-	74	67.630	ENSTNIG00000014519	-	100	80.420	Tetraodon_nigroviridis
ENSOMEG00000006666	-	99	44.491	ENSXMAG00000014715	-	83	79.039	Xiphophorus_maculatus
ENSOMEG00000006666	-	100	74.180	ENSXMAG00000027171	-	100	71.937	Xiphophorus_maculatus