EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000006702 (Gene tree)
Gene ID: 112144486
Gene Symbol: trub2
Alias: -
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8908 bases
Position: chrNVQA01000009.1:3849999-3858906
Accession: 112144486
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005700	TruB_N	PF01509.18	8.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000007045	-	1435	-	ENSOMEP00000005700	329 (aa)	XP_024124798	UPI000CF838D7

Gene Model

Click here to download ENSOMEG00000006702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000006702	trub2	68	31.111	ENSOMEG00000014556	trub1	73	31.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006702	trub2	95	53.698	ENSG00000167112	TRUB2	94	53.698	Homo_sapiens
ENSOMEG00000006702	trub2	75	75.203	ENSAPOG00000015733	trub2	89	75.203	Acanthochromis_polyacanthus
ENSOMEG00000006702	trub2	50	73.780	ENSAPOG00000018216	-	78	73.780	Acanthochromis_polyacanthus
ENSOMEG00000006702	trub2	77	73.964	ENSAPOG00000018284	-	94	73.964	Acanthochromis_polyacanthus
ENSOMEG00000006702	trub2	84	58.633	ENSAMEG00000015395	TRUB2	84	58.633	Ailuropoda_melanoleuca
ENSOMEG00000006702	trub2	99	72.699	ENSACIG00000016500	trub2	99	72.699	Amphilophus_citrinellus
ENSOMEG00000006702	trub2	100	74.468	ENSAOCG00000002330	trub2	96	74.468	Amphiprion_ocellaris
ENSOMEG00000006702	trub2	100	74.164	ENSAPEG00000013177	trub2	96	74.164	Amphiprion_percula
ENSOMEG00000006702	trub2	89	74.061	ENSATEG00000011371	trub2	92	74.061	Anabas_testudineus
ENSOMEG00000006702	trub2	83	51.799	ENSAPLG00000009254	TRUB2	89	52.000	Anas_platyrhynchos
ENSOMEG00000006702	trub2	84	55.000	ENSACAG00000007331	TRUB2	84	55.000	Anolis_carolinensis
ENSOMEG00000006702	trub2	85	58.007	ENSANAG00000036234	TRUB2	90	58.007	Aotus_nancymaae
ENSOMEG00000006702	trub2	99	72.393	ENSACLG00000010793	trub2	99	72.393	Astatotilapia_calliptera
ENSOMEG00000006702	trub2	95	60.952	ENSAMXG00000031679	trub2	90	60.952	Astyanax_mexicanus
ENSOMEG00000006702	trub2	84	57.914	ENSCJAG00000020009	TRUB2	84	57.914	Callithrix_jacchus
ENSOMEG00000006702	trub2	84	57.554	ENSCAFG00000020068	TRUB2	84	57.554	Canis_familiaris
ENSOMEG00000006702	trub2	52	57.647	ENSCAFG00020017325	-	95	57.647	Canis_lupus_dingo
ENSOMEG00000006702	trub2	84	55.755	ENSCHIG00000021160	TRUB2	84	55.755	Capra_hircus
ENSOMEG00000006702	trub2	84	58.633	ENSTSYG00000034163	TRUB2	84	58.633	Carlito_syrichta
ENSOMEG00000006702	trub2	75	56.048	ENSCAPG00000000223	TRUB2	90	52.113	Cavia_aperea
ENSOMEG00000006702	trub2	84	57.554	ENSCPOG00000013535	TRUB2	88	55.233	Cavia_porcellus
ENSOMEG00000006702	trub2	84	54.676	ENSCCAG00000028463	-	84	54.676	Cebus_capucinus
ENSOMEG00000006702	trub2	95	53.185	ENSCCAG00000026531	-	96	53.185	Cebus_capucinus
ENSOMEG00000006702	trub2	84	59.353	ENSCATG00000038234	TRUB2	84	59.353	Cercocebus_atys
ENSOMEG00000006702	trub2	84	57.554	ENSCLAG00000001702	TRUB2	88	56.395	Chinchilla_lanigera
ENSOMEG00000006702	trub2	84	56.028	ENSCSAG00000014117	TRUB2	84	56.028	Chlorocebus_sabaeus
ENSOMEG00000006702	trub2	84	56.115	ENSCHOG00000001555	TRUB2	84	56.115	Choloepus_hoffmanni
ENSOMEG00000006702	trub2	85	56.028	ENSCPBG00000025186	TRUB2	82	56.028	Chrysemys_picta_bellii
ENSOMEG00000006702	trub2	85	33.217	ENSCSAVG00000003930	-	87	33.217	Ciona_savignyi
ENSOMEG00000006702	trub2	95	49.196	ENSCANG00000016135	TRUB2	93	49.196	Colobus_angolensis_palliatus
ENSOMEG00000006702	trub2	84	54.676	ENSCGRG00001024441	Trub2	92	52.326	Cricetulus_griseus_chok1gshd
ENSOMEG00000006702	trub2	84	54.676	ENSCGRG00000005633	Trub2	84	54.676	Cricetulus_griseus_crigri
ENSOMEG00000006702	trub2	98	66.667	ENSCSEG00000001331	trub2	96	66.667	Cynoglossus_semilaevis
ENSOMEG00000006702	trub2	98	71.517	ENSCVAG00000009901	trub2	97	71.517	Cyprinodon_variegatus
ENSOMEG00000006702	trub2	90	61.356	ENSDARG00000028379	trub2	84	61.356	Danio_rerio
ENSOMEG00000006702	trub2	83	36.458	ENSDNOG00000043967	-	87	36.458	Dasypus_novemcinctus
ENSOMEG00000006702	trub2	84	57.040	ENSDNOG00000045679	-	83	57.040	Dasypus_novemcinctus
ENSOMEG00000006702	trub2	85	56.940	ENSDORG00000016222	Trub2	88	56.940	Dipodomys_ordii
ENSOMEG00000006702	trub2	90	34.219	FBgn0033060	CG7849	94	34.219	Drosophila_melanogaster
ENSOMEG00000006702	trub2	86	55.282	ENSETEG00000009114	TRUB2	88	55.282	Echinops_telfairi
ENSOMEG00000006702	trub2	67	48.387	ENSEBUG00000015723	trub2	80	48.387	Eptatretus_burgeri
ENSOMEG00000006702	trub2	84	57.554	ENSEASG00005016819	TRUB2	84	57.554	Equus_asinus_asinus
ENSOMEG00000006702	trub2	84	56.835	ENSECAG00000023520	TRUB2	84	56.835	Equus_caballus
ENSOMEG00000006702	trub2	84	57.194	ENSEEUG00000008908	TRUB2	84	57.194	Erinaceus_europaeus
ENSOMEG00000006702	trub2	92	64.062	ENSELUG00000002376	trub2	99	64.062	Esox_lucius
ENSOMEG00000006702	trub2	86	58.865	ENSFCAG00000005839	TRUB2	88	58.865	Felis_catus
ENSOMEG00000006702	trub2	76	54.800	ENSFALG00000001364	TRUB2	80	55.200	Ficedula_albicollis
ENSOMEG00000006702	trub2	84	56.115	ENSFDAG00000021374	TRUB2	88	53.488	Fukomys_damarensis
ENSOMEG00000006702	trub2	98	66.254	ENSFHEG00000014655	trub2	96	66.254	Fundulus_heteroclitus
ENSOMEG00000006702	trub2	90	58.305	ENSGMOG00000000981	trub2	99	58.305	Gadus_morhua
ENSOMEG00000006702	trub2	83	54.015	ENSGALG00000004920	TRUB2	67	54.015	Gallus_gallus
ENSOMEG00000006702	trub2	99	70.859	ENSGAFG00000010107	trub2	97	70.859	Gambusia_affinis
ENSOMEG00000006702	trub2	99	70.181	ENSGACG00000001476	trub2	100	70.181	Gasterosteus_aculeatus
ENSOMEG00000006702	trub2	97	50.156	ENSGAGG00000022872	TRUB2	95	50.156	Gopherus_agassizii
ENSOMEG00000006702	trub2	95	53.376	ENSGGOG00000014780	TRUB2	94	53.376	Gorilla_gorilla
ENSOMEG00000006702	trub2	99	72.393	ENSHBUG00000022384	trub2	99	72.393	Haplochromis_burtoni
ENSOMEG00000006702	trub2	84	55.755	ENSHGLG00000016715	TRUB2	84	55.755	Heterocephalus_glaber_female
ENSOMEG00000006702	trub2	84	55.755	ENSHGLG00100016548	TRUB2	84	55.755	Heterocephalus_glaber_male
ENSOMEG00000006702	trub2	95	70.740	ENSHCOG00000017748	trub2	94	70.740	Hippocampus_comes
ENSOMEG00000006702	trub2	90	63.051	ENSIPUG00000017725	hdhd3	51	63.051	Ictalurus_punctatus
ENSOMEG00000006702	trub2	84	56.835	ENSSTOG00000022617	-	84	56.835	Ictidomys_tridecemlineatus
ENSOMEG00000006702	trub2	94	52.215	ENSSTOG00000008024	-	95	52.215	Ictidomys_tridecemlineatus
ENSOMEG00000006702	trub2	84	50.719	ENSJJAG00000019181	Trub2	82	50.719	Jaculus_jaculus
ENSOMEG00000006702	trub2	99	72.086	ENSKMAG00000007861	trub2	98	72.086	Kryptolebias_marmoratus
ENSOMEG00000006702	trub2	97	69.182	ENSLBEG00000000907	trub2	94	69.182	Labrus_bergylta
ENSOMEG00000006702	trub2	95	53.698	ENSLACG00000001515	TRUB2	91	53.698	Latimeria_chalumnae
ENSOMEG00000006702	trub2	88	58.478	ENSLOCG00000000885	trub2	95	58.478	Lepisosteus_oculatus
ENSOMEG00000006702	trub2	84	57.554	ENSLAFG00000002174	TRUB2	91	57.554	Loxodonta_africana
ENSOMEG00000006702	trub2	84	58.993	ENSMFAG00000000881	TRUB2	84	58.993	Macaca_fascicularis
ENSOMEG00000006702	trub2	84	58.993	ENSMMUG00000014146	TRUB2	84	58.993	Macaca_mulatta
ENSOMEG00000006702	trub2	84	58.993	ENSMNEG00000011189	TRUB2	84	58.993	Macaca_nemestrina
ENSOMEG00000006702	trub2	84	58.993	ENSMLEG00000037270	TRUB2	84	58.993	Mandrillus_leucophaeus
ENSOMEG00000006702	trub2	90	74.576	ENSMAMG00000023643	trub2	98	74.576	Mastacembelus_armatus
ENSOMEG00000006702	trub2	99	72.699	ENSMZEG00005016018	trub2	99	72.699	Maylandia_zebra
ENSOMEG00000006702	trub2	56	57.377	ENSMGAG00000003894	TRUB2	92	57.377	Meleagris_gallopavo
ENSOMEG00000006702	trub2	84	55.396	ENSMAUG00000010403	Trub2	95	51.075	Mesocricetus_auratus
ENSOMEG00000006702	trub2	84	57.914	ENSMICG00000047032	TRUB2	84	57.914	Microcebus_murinus
ENSOMEG00000006702	trub2	84	55.755	ENSMOCG00000014291	Trub2	91	55.755	Microtus_ochrogaster
ENSOMEG00000006702	trub2	95	74.204	ENSMMOG00000021674	trub2	97	74.204	Mola_mola
ENSOMEG00000006702	trub2	87	54.035	ENSMODG00000005940	TRUB2	96	54.035	Monodelphis_domestica
ENSOMEG00000006702	trub2	98	72.086	ENSMALG00000021231	trub2	97	72.086	Monopterus_albus
ENSOMEG00000006702	trub2	84	53.597	MGP_CAROLIEiJ_G0023368	Trub2	95	48.925	Mus_caroli
ENSOMEG00000006702	trub2	84	53.957	ENSMUSG00000039826	Trub2	95	49.462	Mus_musculus
ENSOMEG00000006702	trub2	84	53.957	MGP_PahariEiJ_G0024826	Trub2	88	51.744	Mus_pahari
ENSOMEG00000006702	trub2	84	54.317	MGP_SPRETEiJ_G0024286	Trub2	95	50.000	Mus_spretus
ENSOMEG00000006702	trub2	84	57.554	ENSMPUG00000013206	TRUB2	76	57.554	Mustela_putorius_furo
ENSOMEG00000006702	trub2	84	57.554	ENSMLUG00000005256	TRUB2	83	57.554	Myotis_lucifugus
ENSOMEG00000006702	trub2	84	54.676	ENSNGAG00000018679	Trub2	84	54.676	Nannospalax_galili
ENSOMEG00000006702	trub2	99	72.699	ENSNBRG00000016294	trub2	99	72.699	Neolamprologus_brichardi
ENSOMEG00000006702	trub2	95	53.355	ENSNLEG00000017556	TRUB2	94	53.355	Nomascus_leucogenys
ENSOMEG00000006702	trub2	84	55.036	ENSMEUG00000000484	TRUB2	89	55.036	Notamacropus_eugenii
ENSOMEG00000006702	trub2	84	53.597	ENSOPRG00000001981	TRUB2	84	53.597	Ochotona_princeps
ENSOMEG00000006702	trub2	84	56.475	ENSODEG00000017292	TRUB2	85	56.475	Octodon_degus
ENSOMEG00000006702	trub2	99	72.086	ENSONIG00000004230	trub2	99	72.086	Oreochromis_niloticus
ENSOMEG00000006702	trub2	57	52.660	ENSOANG00000029023	-	83	52.660	Ornithorhynchus_anatinus
ENSOMEG00000006702	trub2	84	55.755	ENSOCUG00000026296	TRUB2	76	55.755	Oryctolagus_cuniculus
ENSOMEG00000006702	trub2	98	79.193	ENSORLG00000020011	trub2	94	79.814	Oryzias_latipes
ENSOMEG00000006702	trub2	99	78.049	ENSORLG00020011028	trub2	93	78.354	Oryzias_latipes_hni
ENSOMEG00000006702	trub2	100	78.723	ENSORLG00015007494	trub2	98	79.027	Oryzias_latipes_hsok
ENSOMEG00000006702	trub2	86	55.634	ENSOARG00000010579	-	85	55.634	Ovis_aries
ENSOMEG00000006702	trub2	61	56.000	ENSOARG00000003785	-	81	55.610	Ovis_aries
ENSOMEG00000006702	trub2	95	54.019	ENSPPAG00000043146	TRUB2	94	54.019	Pan_paniscus
ENSOMEG00000006702	trub2	86	58.865	ENSPPRG00000006307	TRUB2	88	58.865	Panthera_pardus
ENSOMEG00000006702	trub2	86	59.220	ENSPTIG00000012366	TRUB2	88	59.220	Panthera_tigris_altaica
ENSOMEG00000006702	trub2	95	53.698	ENSPTRG00000052151	-	94	53.698	Pan_troglodytes
ENSOMEG00000006702	trub2	95	53.698	ENSPTRG00000021423	TRUB2	94	53.698	Pan_troglodytes
ENSOMEG00000006702	trub2	84	58.993	ENSPANG00000025856	TRUB2	84	58.993	Papio_anubis
ENSOMEG00000006702	trub2	90	64.000	ENSPKIG00000019769	trub2	98	64.000	Paramormyrops_kingsleyae
ENSOMEG00000006702	trub2	85	51.957	ENSPSIG00000015701	TRUB2	93	51.957	Pelodiscus_sinensis
ENSOMEG00000006702	trub2	94	67.097	ENSPMGG00000010206	trub2	97	67.097	Periophthalmus_magnuspinnatus
ENSOMEG00000006702	trub2	84	54.839	ENSPEMG00000017893	Trub2	92	52.023	Peromyscus_maniculatus_bairdii
ENSOMEG00000006702	trub2	87	55.245	ENSPCIG00000026731	TRUB2	92	55.245	Phascolarctos_cinereus
ENSOMEG00000006702	trub2	96	69.906	ENSPFOG00000018018	trub2	84	69.906	Poecilia_formosa
ENSOMEG00000006702	trub2	96	70.219	ENSPLAG00000010484	trub2	91	70.219	Poecilia_latipinna
ENSOMEG00000006702	trub2	99	69.605	ENSPMEG00000012913	trub2	97	69.605	Poecilia_mexicana
ENSOMEG00000006702	trub2	99	69.725	ENSPREG00000002549	trub2	97	69.725	Poecilia_reticulata
ENSOMEG00000006702	trub2	84	57.554	ENSPPYG00000019650	TRUB2	85	57.554	Pongo_abelii
ENSOMEG00000006702	trub2	84	57.554	ENSPCAG00000015068	TRUB2	85	57.554	Procavia_capensis
ENSOMEG00000006702	trub2	84	57.554	ENSPCOG00000017100	TRUB2	84	57.554	Propithecus_coquereli
ENSOMEG00000006702	trub2	79	56.538	ENSPVAG00000001224	TRUB2	87	56.538	Pteropus_vampyrus
ENSOMEG00000006702	trub2	99	72.393	ENSPNYG00000013666	trub2	99	72.393	Pundamilia_nyererei
ENSOMEG00000006702	trub2	99	58.359	ENSPNAG00000017292	trub2	94	58.359	Pygocentrus_nattereri
ENSOMEG00000006702	trub2	84	55.755	ENSRNOG00000043189	Trub2	86	55.755	Rattus_norvegicus
ENSOMEG00000006702	trub2	95	48.882	ENSRBIG00000006965	TRUB2	94	48.882	Rhinopithecus_bieti
ENSOMEG00000006702	trub2	95	53.674	ENSRROG00000042928	TRUB2	94	53.674	Rhinopithecus_roxellana
ENSOMEG00000006702	trub2	95	53.055	ENSSBOG00000022439	TRUB2	94	53.055	Saimiri_boliviensis_boliviensis
ENSOMEG00000006702	trub2	87	63.066	ENSSFOG00015013391	trub2	92	63.066	Scleropages_formosus
ENSOMEG00000006702	trub2	99	70.427	ENSSMAG00000020820	trub2	99	70.427	Scophthalmus_maximus
ENSOMEG00000006702	trub2	99	71.166	ENSSDUG00000016928	trub2	97	71.166	Seriola_dumerili
ENSOMEG00000006702	trub2	99	71.472	ENSSLDG00000024701	trub2	97	71.472	Seriola_lalandi_dorsalis
ENSOMEG00000006702	trub2	88	50.865	ENSSPUG00000015515	TRUB2	86	50.865	Sphenodon_punctatus
ENSOMEG00000006702	trub2	100	72.644	ENSSPAG00000017865	trub2	98	72.644	Stegastes_partitus
ENSOMEG00000006702	trub2	84	56.115	ENSSSCG00000005645	TRUB2	84	55.020	Sus_scrofa
ENSOMEG00000006702	trub2	75	55.645	ENSTGUG00000003704	TRUB2	94	55.645	Taeniopygia_guttata
ENSOMEG00000006702	trub2	95	67.722	ENSTRUG00000015499	trub2	97	67.722	Takifugu_rubripes
ENSOMEG00000006702	trub2	88	72.069	ENSTNIG00000014721	trub2	99	72.069	Tetraodon_nigroviridis
ENSOMEG00000006702	trub2	54	55.056	ENSTBEG00000000586	TRUB2	79	55.056	Tupaia_belangeri
ENSOMEG00000006702	trub2	84	53.597	ENSTTRG00000016486	TRUB2	84	53.597	Tursiops_truncatus
ENSOMEG00000006702	trub2	84	57.554	ENSUAMG00000020276	TRUB2	81	57.554	Ursus_americanus
ENSOMEG00000006702	trub2	84	57.554	ENSUMAG00000022051	TRUB2	81	57.554	Ursus_maritimus
ENSOMEG00000006702	trub2	86	43.662	ENSVPAG00000005793	TRUB2	89	43.662	Vicugna_pacos
ENSOMEG00000006702	trub2	94	53.226	ENSVVUG00000013451	TRUB2	88	53.226	Vulpes_vulpes
ENSOMEG00000006702	trub2	88	54.795	ENSXETG00000003973	trub2	89	54.795	Xenopus_tropicalis
ENSOMEG00000006702	trub2	99	70.245	ENSXCOG00000008759	trub2	97	70.245	Xiphophorus_couchianus
ENSOMEG00000006702	trub2	99	70.552	ENSXMAG00000015478	trub2	97	70.552	Xiphophorus_maculatus