EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000006724 (Gene tree)
Gene ID: 112136914
Gene Symbol: trmt13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 13053 bases
Position: chrNVQA01000035.1:5862391-5875443
Accession: 112136914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000025465	TRM13	PF05206.14	8.9e-86	1	1
ENSOMEP00000025483	TRM13	PF05206.14	1.7e-80	1	1
ENSOMEP00000025483	zf-U11-48K	PF05253.12	6.3e-10	1	1
ENSOMEP00000025465	zf-U11-48K	PF05253.12	1e-09	1	1
ENSOMEP00000025465	zf-TRM13_CCCH	PF11722.8	5.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000007004	-	1504	-	ENSOMEP00000025483	443 (aa)	-	-
ENSOMET00000007039	-	3559	-	ENSOMEP00000025465	478 (aa)	XP_024114691	UPI000CF7B40F

Gene Model

Click here to download ENSOMEG00000006724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006724's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006724	trmt13	95	52.008	ENSG00000122435	TRMT13	96	54.286	Homo_sapiens
ENSOMEG00000006724	trmt13	94	66.870	ENSAPOG00000015131	trmt13	100	67.894	Acanthochromis_polyacanthus
ENSOMEG00000006724	trmt13	94	53.404	ENSAMEG00000008917	TRMT13	97	52.431	Ailuropoda_melanoleuca
ENSOMEG00000006724	trmt13	95	71.490	ENSACIG00000005804	trmt13	98	69.379	Amphilophus_citrinellus
ENSOMEG00000006724	trmt13	94	68.098	ENSAOCG00000023585	trmt13	100	68.098	Amphiprion_ocellaris
ENSOMEG00000006724	trmt13	94	68.098	ENSAPEG00000004025	trmt13	100	68.507	Amphiprion_percula
ENSOMEG00000006724	trmt13	95	68.602	ENSATEG00000006597	trmt13	98	68.602	Anabas_testudineus
ENSOMEG00000006724	trmt13	88	52.206	ENSAPLG00000014924	TRMT13	99	52.817	Anas_platyrhynchos
ENSOMEG00000006724	trmt13	93	54.978	ENSACAG00000003498	TRMT13	97	54.329	Anolis_carolinensis
ENSOMEG00000006724	trmt13	95	52.220	ENSANAG00000019525	TRMT13	97	51.586	Aotus_nancymaae
ENSOMEG00000006724	trmt13	94	72.627	ENSACLG00000020018	trmt13	99	71.744	Astatotilapia_calliptera
ENSOMEG00000006724	trmt13	95	53.928	ENSAMXG00000017963	trmt13	99	54.352	Astyanax_mexicanus
ENSOMEG00000006724	trmt13	95	52.431	ENSBTAG00000015781	TRMT13	97	52.431	Bos_taurus
ENSOMEG00000006724	trmt13	95	51.374	ENSCJAG00000000200	TRMT13	89	59.854	Callithrix_jacchus
ENSOMEG00000006724	trmt13	63	48.485	ENSCAFG00000020021	TRMT13	97	48.718	Canis_familiaris
ENSOMEG00000006724	trmt13	55	59.023	ENSCAFG00020011572	TRMT13	90	59.023	Canis_lupus_dingo
ENSOMEG00000006724	trmt13	95	51.782	ENSCHIG00000015395	TRMT13	98	51.363	Capra_hircus
ENSOMEG00000006724	trmt13	95	53.053	ENSTSYG00000010811	TRMT13	98	60.000	Carlito_syrichta
ENSOMEG00000006724	trmt13	77	38.068	ENSCAPG00000009085	TRMT13	90	40.653	Cavia_aperea
ENSOMEG00000006724	trmt13	94	52.688	ENSCPOG00000000694	TRMT13	96	52.043	Cavia_porcellus
ENSOMEG00000006724	trmt13	95	52.431	ENSCCAG00000023772	TRMT13	97	51.797	Cebus_capucinus
ENSOMEG00000006724	trmt13	94	52.340	ENSCATG00000033556	TRMT13	97	51.374	Cercocebus_atys
ENSOMEG00000006724	trmt13	88	51.741	ENSCLAG00000008220	TRMT13	99	49.886	Chinchilla_lanigera
ENSOMEG00000006724	trmt13	94	52.452	ENSCSAG00000001506	TRMT13	97	51.483	Chlorocebus_sabaeus
ENSOMEG00000006724	trmt13	95	53.390	ENSCPBG00000026671	TRMT13	97	51.891	Chrysemys_picta_bellii
ENSOMEG00000006724	trmt13	94	52.340	ENSCANG00000034659	TRMT13	97	51.374	Colobus_angolensis_palliatus
ENSOMEG00000006724	trmt13	95	50.943	ENSCGRG00001021601	Trmt13	97	50.524	Cricetulus_griseus_chok1gshd
ENSOMEG00000006724	trmt13	50	46.094	ENSCGRG00000000093	-	99	46.484	Cricetulus_griseus_crigri
ENSOMEG00000006724	trmt13	94	66.372	ENSCSEG00000000591	trmt13	98	65.632	Cynoglossus_semilaevis
ENSOMEG00000006724	trmt13	95	70.085	ENSCVAG00000017342	trmt13	95	70.085	Cyprinodon_variegatus
ENSOMEG00000006724	trmt13	94	56.893	ENSDARG00000102846	trmt13	97	56.236	Danio_rerio
ENSOMEG00000006724	trmt13	55	56.746	ENSDNOG00000001710	TRMT13	80	56.667	Dasypus_novemcinctus
ENSOMEG00000006724	trmt13	94	51.599	ENSDORG00000015808	Trmt13	96	51.055	Dipodomys_ordii
ENSOMEG00000006724	trmt13	93	34.914	FBgn0037435	CG18048	94	34.267	Drosophila_melanogaster
ENSOMEG00000006724	trmt13	94	45.684	ENSETEG00000005819	TRMT13	97	45.684	Echinops_telfairi
ENSOMEG00000006724	trmt13	92	46.581	ENSEBUG00000014444	trmt13	96	46.039	Eptatretus_burgeri
ENSOMEG00000006724	trmt13	94	52.026	ENSEASG00005015918	TRMT13	96	51.688	Equus_asinus_asinus
ENSOMEG00000006724	trmt13	94	51.812	ENSECAG00000022626	TRMT13	96	51.477	Equus_caballus
ENSOMEG00000006724	trmt13	74	54.237	ENSEEUG00000000294	TRMT13	74	54.237	Erinaceus_europaeus
ENSOMEG00000006724	trmt13	94	56.989	ENSELUG00000003803	trmt13	98	57.634	Esox_lucius
ENSOMEG00000006724	trmt13	94	52.340	ENSFCAG00000030618	TRMT13	98	55.245	Felis_catus
ENSOMEG00000006724	trmt13	93	54.565	ENSFALG00000002424	TRMT13	95	54.130	Ficedula_albicollis
ENSOMEG00000006724	trmt13	95	51.368	ENSFDAG00000006342	TRMT13	97	51.042	Fukomys_damarensis
ENSOMEG00000006724	trmt13	80	72.312	ENSFHEG00000022954	trmt13	96	73.165	Fundulus_heteroclitus
ENSOMEG00000006724	trmt13	92	55.430	ENSGMOG00000013223	trmt13	99	55.430	Gadus_morhua
ENSOMEG00000006724	trmt13	93	53.275	ENSGALG00000005290	TRMT13	96	53.813	Gallus_gallus
ENSOMEG00000006724	trmt13	79	68.451	ENSGAFG00000001577	trmt13	84	68.883	Gambusia_affinis
ENSOMEG00000006724	trmt13	96	71.834	ENSGACG00000013428	trmt13	99	71.991	Gasterosteus_aculeatus
ENSOMEG00000006724	trmt13	97	52.610	ENSGAGG00000023303	TRMT13	97	59.140	Gopherus_agassizii
ENSOMEG00000006724	trmt13	95	51.797	ENSGGOG00000005616	TRMT13	97	51.163	Gorilla_gorilla
ENSOMEG00000006724	trmt13	94	72.368	ENSHBUG00000007754	trmt13	99	71.491	Haplochromis_burtoni
ENSOMEG00000006724	trmt13	95	51.158	ENSHGLG00000002164	TRMT13	97	50.947	Heterocephalus_glaber_female
ENSOMEG00000006724	trmt13	95	51.158	ENSHGLG00100001618	TRMT13	97	50.947	Heterocephalus_glaber_male
ENSOMEG00000006724	trmt13	95	56.061	ENSHCOG00000020553	trmt13	100	55.844	Hippocampus_comes
ENSOMEG00000006724	trmt13	94	55.824	ENSIPUG00000024787	trmt13	98	56.484	Ictalurus_punctatus
ENSOMEG00000006724	trmt13	94	51.477	ENSSTOG00000013483	TRMT13	97	50.837	Ictidomys_tridecemlineatus
ENSOMEG00000006724	trmt13	94	51.277	ENSJJAG00000018012	Trmt13	97	51.277	Jaculus_jaculus
ENSOMEG00000006724	trmt13	63	70.567	ENSKMAG00000007639	trmt13	92	71.525	Kryptolebias_marmoratus
ENSOMEG00000006724	trmt13	94	70.626	ENSLBEG00000020238	trmt13	99	70.563	Labrus_bergylta
ENSOMEG00000006724	trmt13	94	53.747	ENSLACG00000013153	TRMT13	98	53.747	Latimeria_chalumnae
ENSOMEG00000006724	trmt13	94	55.044	ENSLOCG00000000418	trmt13	97	54.386	Lepisosteus_oculatus
ENSOMEG00000006724	trmt13	76	50.141	ENSLAFG00000002383	TRMT13	94	50.847	Loxodonta_africana
ENSOMEG00000006724	trmt13	94	52.128	ENSMFAG00000034681	TRMT13	97	51.586	Macaca_fascicularis
ENSOMEG00000006724	trmt13	94	52.128	ENSMMUG00000004243	TRMT13	97	51.586	Macaca_mulatta
ENSOMEG00000006724	trmt13	94	52.128	ENSMNEG00000036102	TRMT13	97	51.586	Macaca_nemestrina
ENSOMEG00000006724	trmt13	94	52.553	ENSMLEG00000034258	TRMT13	97	51.586	Mandrillus_leucophaeus
ENSOMEG00000006724	trmt13	96	70.601	ENSMAMG00000016597	trmt13	99	70.601	Mastacembelus_armatus
ENSOMEG00000006724	trmt13	94	72.406	ENSMZEG00005020959	trmt13	99	71.523	Maylandia_zebra
ENSOMEG00000006724	trmt13	88	53.580	ENSMGAG00000006970	TRMT13	99	53.901	Meleagris_gallopavo
ENSOMEG00000006724	trmt13	94	51.579	ENSMAUG00000010448	Trmt13	96	51.368	Mesocricetus_auratus
ENSOMEG00000006724	trmt13	95	53.066	ENSMICG00000005283	TRMT13	96	55.000	Microcebus_murinus
ENSOMEG00000006724	trmt13	94	52.442	ENSMOCG00000019914	Trmt13	96	51.266	Microtus_ochrogaster
ENSOMEG00000006724	trmt13	56	63.100	ENSMMOG00000007762	trmt13	90	63.100	Mola_mola
ENSOMEG00000006724	trmt13	95	51.464	ENSMODG00000003646	TRMT13	98	51.255	Monodelphis_domestica
ENSOMEG00000006724	trmt13	96	67.819	ENSMALG00000020965	trmt13	99	67.316	Monopterus_albus
ENSOMEG00000006724	trmt13	94	51.709	MGP_CAROLIEiJ_G0025568	Trmt13	78	73.469	Mus_caroli
ENSOMEG00000006724	trmt13	94	51.709	ENSMUSG00000033439	Trmt13	96	54.749	Mus_musculus
ENSOMEG00000006724	trmt13	94	51.923	MGP_PahariEiJ_G0027014	Trmt13	78	73.469	Mus_pahari
ENSOMEG00000006724	trmt13	95	51.695	MGP_SPRETEiJ_G0026518	Trmt13	96	54.749	Mus_spretus
ENSOMEG00000006724	trmt13	78	50.852	ENSMPUG00000002078	-	91	51.014	Mustela_putorius_furo
ENSOMEG00000006724	trmt13	93	52.688	ENSMLUG00000002124	TRMT13	95	52.258	Myotis_lucifugus
ENSOMEG00000006724	trmt13	94	66.886	ENSNBRG00000006783	trmt13	97	66.447	Neolamprologus_brichardi
ENSOMEG00000006724	trmt13	95	51.797	ENSNLEG00000035917	TRMT13	97	51.163	Nomascus_leucogenys
ENSOMEG00000006724	trmt13	51	50.199	ENSMEUG00000013346	-	94	50.417	Notamacropus_eugenii
ENSOMEG00000006724	trmt13	65	56.767	ENSOPRG00000012048	TRMT13	64	56.767	Ochotona_princeps
ENSOMEG00000006724	trmt13	94	72.368	ENSONIG00000004574	trmt13	99	71.711	Oreochromis_niloticus
ENSOMEG00000006724	trmt13	88	51.951	ENSOANG00000012057	TRMT13	98	51.620	Ornithorhynchus_anatinus
ENSOMEG00000006724	trmt13	95	51.168	ENSOCUG00000023095	TRMT13	97	50.531	Oryctolagus_cuniculus
ENSOMEG00000006724	trmt13	95	81.304	ENSORLG00000003320	trmt13	100	81.304	Oryzias_latipes
ENSOMEG00000006724	trmt13	94	81.858	ENSORLG00020005972	trmt13	98	81.637	Oryzias_latipes_hni
ENSOMEG00000006724	trmt13	95	89.107	ENSORLG00015002270	trmt13	100	89.107	Oryzias_latipes_hsok
ENSOMEG00000006724	trmt13	94	52.350	ENSOGAG00000005618	TRMT13	94	52.119	Otolemur_garnettii
ENSOMEG00000006724	trmt13	95	51.782	ENSOARG00000017983	TRMT13	98	51.363	Ovis_aries
ENSOMEG00000006724	trmt13	95	52.220	ENSPPAG00000043736	TRMT13	97	51.797	Pan_paniscus
ENSOMEG00000006724	trmt13	94	52.340	ENSPPRG00000003424	TRMT13	98	55.245	Panthera_pardus
ENSOMEG00000006724	trmt13	94	52.340	ENSPTIG00000018598	TRMT13	98	55.245	Panthera_tigris_altaica
ENSOMEG00000006724	trmt13	95	52.220	ENSPTRG00000001001	TRMT13	97	51.797	Pan_troglodytes
ENSOMEG00000006724	trmt13	94	52.340	ENSPANG00000007598	TRMT13	97	51.374	Papio_anubis
ENSOMEG00000006724	trmt13	95	56.167	ENSPKIG00000001514	trmt13	99	56.388	Paramormyrops_kingsleyae
ENSOMEG00000006724	trmt13	91	52.246	ENSPSIG00000012703	TRMT13	99	51.537	Pelodiscus_sinensis
ENSOMEG00000006724	trmt13	94	61.488	ENSPMGG00000013298	trmt13	93	60.927	Periophthalmus_magnuspinnatus
ENSOMEG00000006724	trmt13	95	51.483	ENSPEMG00000000275	Trmt13	97	51.271	Peromyscus_maniculatus_bairdii
ENSOMEG00000006724	trmt13	93	48.326	ENSPMAG00000000823	trmt13	98	47.490	Petromyzon_marinus
ENSOMEG00000006724	trmt13	97	50.932	ENSPCIG00000007699	TRMT13	99	50.725	Phascolarctos_cinereus
ENSOMEG00000006724	trmt13	94	67.108	ENSPFOG00000008675	trmt13	96	67.108	Poecilia_formosa
ENSOMEG00000006724	trmt13	94	67.912	ENSPLAG00000009709	trmt13	99	67.912	Poecilia_latipinna
ENSOMEG00000006724	trmt13	94	67.253	ENSPMEG00000022954	trmt13	99	67.253	Poecilia_mexicana
ENSOMEG00000006724	trmt13	79	69.748	ENSPREG00000005645	trmt13	94	64.561	Poecilia_reticulata
ENSOMEG00000006724	trmt13	93	52.361	ENSPPYG00000001120	TRMT13	95	51.717	Pongo_abelii
ENSOMEG00000006724	trmt13	95	50.737	ENSPCAG00000002340	TRMT13	97	49.682	Procavia_capensis
ENSOMEG00000006724	trmt13	97	50.928	ENSPCOG00000017984	TRMT13	94	57.843	Propithecus_coquereli
ENSOMEG00000006724	trmt13	94	52.026	ENSPVAG00000017430	TRMT13	96	51.168	Pteropus_vampyrus
ENSOMEG00000006724	trmt13	94	69.737	ENSPNYG00000013690	trmt13	99	68.860	Pundamilia_nyererei
ENSOMEG00000006724	trmt13	94	56.399	ENSPNAG00000022130	trmt13	98	56.182	Pygocentrus_nattereri
ENSOMEG00000006724	trmt13	95	52.229	ENSRNOG00000015140	Trmt13	94	51.050	Rattus_norvegicus
ENSOMEG00000006724	trmt13	94	52.340	ENSRBIG00000037686	TRMT13	97	51.374	Rhinopithecus_bieti
ENSOMEG00000006724	trmt13	94	52.340	ENSRROG00000044057	TRMT13	97	51.374	Rhinopithecus_roxellana
ENSOMEG00000006724	trmt13	95	52.220	ENSSBOG00000026541	TRMT13	97	51.586	Saimiri_boliviensis_boliviensis
ENSOMEG00000006724	trmt13	91	50.591	ENSSHAG00000005213	TRMT13	97	50.901	Sarcophilus_harrisii
ENSOMEG00000006724	trmt13	95	57.516	ENSSFOG00015017560	trmt13	98	57.516	Scleropages_formosus
ENSOMEG00000006724	trmt13	96	68.085	ENSSMAG00000014592	trmt13	98	68.085	Scophthalmus_maximus
ENSOMEG00000006724	trmt13	95	70.213	ENSSDUG00000015508	trmt13	98	70.526	Seriola_dumerili
ENSOMEG00000006724	trmt13	96	69.958	ENSSLDG00000019060	trmt13	98	70.402	Seriola_lalandi_dorsalis
ENSOMEG00000006724	trmt13	95	46.849	ENSSARG00000010344	TRMT13	99	46.429	Sorex_araneus
ENSOMEG00000006724	trmt13	93	53.233	ENSSPUG00000016339	TRMT13	99	51.828	Sphenodon_punctatus
ENSOMEG00000006724	trmt13	94	72.747	ENSSPAG00000011922	trmt13	99	72.511	Stegastes_partitus
ENSOMEG00000006724	trmt13	95	52.321	ENSSSCG00000006869	TRMT13	97	51.477	Sus_scrofa
ENSOMEG00000006724	trmt13	94	54.329	ENSTGUG00000005253	TRMT13	98	53.463	Taeniopygia_guttata
ENSOMEG00000006724	trmt13	94	65.882	ENSTRUG00000008400	trmt13	99	64.946	Takifugu_rubripes
ENSOMEG00000006724	trmt13	86	39.043	ENSTBEG00000008911	TRMT13	99	39.183	Tupaia_belangeri
ENSOMEG00000006724	trmt13	94	51.068	ENSUAMG00000017251	TRMT13	97	49.894	Ursus_americanus
ENSOMEG00000006724	trmt13	94	53.404	ENSUMAG00000007901	TRMT13	99	51.843	Ursus_maritimus
ENSOMEG00000006724	trmt13	76	62.963	ENSVPAG00000001034	TRMT13	86	62.963	Vicugna_pacos
ENSOMEG00000006724	trmt13	93	52.790	ENSVVUG00000021996	TRMT13	95	52.790	Vulpes_vulpes
ENSOMEG00000006724	trmt13	94	52.747	ENSXETG00000013204	trmt13	98	52.070	Xenopus_tropicalis
ENSOMEG00000006724	trmt13	94	66.154	ENSXMAG00000010765	trmt13	99	66.154	Xiphophorus_maculatus