EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000006805 (Gene tree)
Gene ID: 112159061
Gene Symbol: rbm38
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 27962 bases
Position: chrNVQA01000024.1:20399977-20427938
Accession: 112159061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005784	RRM_1	PF00076.22	8.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000006904	-	2377	-	ENSOMEP00000005784	251 (aa)	XP_024148661	UPI000CF80218

Gene Model

Click here to download ENSOMEG00000006805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000006805	rbm38	62	64.417	ENSOMEG00000021525	rbm24b	100	52.549
ENSOMEG00000006805	rbm38	98	57.143	ENSOMEG00000023912	-	99	57.600
ENSOMEG00000006805	rbm38	69	35.632	ENSOMEG00000003120	dazap1	71	35.632
ENSOMEG00000006805	rbm38	54	73.333	ENSOMEG00000011760	rbm24a	100	53.036
ENSOMEG00000006805	rbm38	55	31.250	ENSOMEG00000017536	MSI1	50	36.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006805	rbm38	91	55.556	ENSG00000132819	RBM38	94	79.487	Homo_sapiens
ENSOMEG00000006805	rbm38	100	85.259	ENSAPOG00000003301	rbm38	100	85.259	Acanthochromis_polyacanthus
ENSOMEG00000006805	rbm38	98	60.317	ENSAPOG00000009939	-	99	60.800	Acanthochromis_polyacanthus
ENSOMEG00000006805	rbm38	100	81.673	ENSACIG00000000010	rbm38	100	81.673	Amphilophus_citrinellus
ENSOMEG00000006805	rbm38	98	59.921	ENSACIG00000012502	-	100	82.051	Amphilophus_citrinellus
ENSOMEG00000006805	rbm38	96	60.656	ENSAOCG00000012559	RBM38	99	61.224	Amphiprion_ocellaris
ENSOMEG00000006805	rbm38	100	85.657	ENSAOCG00000013497	-	100	85.657	Amphiprion_ocellaris
ENSOMEG00000006805	rbm38	100	85.657	ENSAPEG00000013137	rbm38	100	85.657	Amphiprion_percula
ENSOMEG00000006805	rbm38	98	59.524	ENSAPEG00000023581	-	99	60.079	Amphiprion_percula
ENSOMEG00000006805	rbm38	100	80.080	ENSATEG00000016366	rbm38	100	80.080	Anabas_testudineus
ENSOMEG00000006805	rbm38	98	59.127	ENSATEG00000016710	-	100	59.608	Anabas_testudineus
ENSOMEG00000006805	rbm38	93	55.649	ENSACAG00000016238	RBM38	90	55.649	Anolis_carolinensis
ENSOMEG00000006805	rbm38	93	55.649	ENSANAG00000031959	RBM38	80	84.694	Aotus_nancymaae
ENSOMEG00000006805	rbm38	98	60.870	ENSACLG00000019514	-	99	60.870	Astatotilapia_calliptera
ENSOMEG00000006805	rbm38	96	60.581	ENSAMXG00000015601	-	96	60.581	Astyanax_mexicanus
ENSOMEG00000006805	rbm38	94	55.319	ENSAMXG00000038120	rbm38	94	55.319	Astyanax_mexicanus
ENSOMEG00000006805	rbm38	91	55.983	ENSBTAG00000008105	RBM38	89	55.983	Bos_taurus
ENSOMEG00000006805	rbm38	58	58.904	WBGene00006321	sup-12	77	67.241	Caenorhabditis_elegans
ENSOMEG00000006805	rbm38	91	55.128	ENSCJAG00000019139	RBM38	80	84.694	Callithrix_jacchus
ENSOMEG00000006805	rbm38	91	55.983	ENSCAFG00020021943	RBM38	89	55.983	Canis_lupus_dingo
ENSOMEG00000006805	rbm38	77	60.914	ENSCHIG00000002609	RBM38	81	60.914	Capra_hircus
ENSOMEG00000006805	rbm38	91	56.410	ENSCPOG00000012781	RBM38	89	56.410	Cavia_porcellus
ENSOMEG00000006805	rbm38	91	55.128	ENSCCAG00000036872	RBM38	80	84.694	Cebus_capucinus
ENSOMEG00000006805	rbm38	77	61.929	ENSCATG00000032133	RBM38	80	84.694	Cercocebus_atys
ENSOMEG00000006805	rbm38	93	56.067	ENSCLAG00000005906	RBM38	94	56.067	Chinchilla_lanigera
ENSOMEG00000006805	rbm38	77	61.929	ENSCSAG00000015503	RBM38	82	61.929	Chlorocebus_sabaeus
ENSOMEG00000006805	rbm38	93	56.485	ENSCPBG00000024059	RBM38	100	56.485	Chrysemys_picta_bellii
ENSOMEG00000006805	rbm38	59	61.146	ENSCING00000025102	-	66	61.146	Ciona_intestinalis
ENSOMEG00000006805	rbm38	61	60.127	ENSCSAVG00000001132	-	98	43.774	Ciona_savignyi
ENSOMEG00000006805	rbm38	80	46.500	ENSCANG00000030105	-	73	46.500	Colobus_angolensis_palliatus
ENSOMEG00000006805	rbm38	72	63.388	ENSCGRG00001012928	Rbm38	81	62.051	Cricetulus_griseus_chok1gshd
ENSOMEG00000006805	rbm38	98	59.524	ENSCSEG00000004701	-	99	60.714	Cynoglossus_semilaevis
ENSOMEG00000006805	rbm38	81	64.532	ENSCSEG00000020943	rbm38	66	64.532	Cynoglossus_semilaevis
ENSOMEG00000006805	rbm38	100	78.088	ENSCVAG00000015952	rbm38	100	81.275	Cyprinodon_variegatus
ENSOMEG00000006805	rbm38	96	62.397	ENSCVAG00000005472	-	99	61.200	Cyprinodon_variegatus
ENSOMEG00000006805	rbm38	97	60.163	ENSDARG00000058818	rbm38	99	60.163	Danio_rerio
ENSOMEG00000006805	rbm38	76	60.622	ENSDNOG00000032004	RBM38	89	60.622	Dasypus_novemcinctus
ENSOMEG00000006805	rbm38	77	61.421	ENSECAG00000007700	RBM38	81	61.421	Equus_caballus
ENSOMEG00000006805	rbm38	80	62.069	ENSEEUG00000013489	RBM38	83	62.069	Erinaceus_europaeus
ENSOMEG00000006805	rbm38	98	58.268	ENSELUG00000005849	-	99	58.268	Esox_lucius
ENSOMEG00000006805	rbm38	91	63.755	ENSELUG00000000585	-	99	63.755	Esox_lucius
ENSOMEG00000006805	rbm38	74	62.766	ENSFCAG00000042916	RBM38	80	83.673	Felis_catus
ENSOMEG00000006805	rbm38	69	66.477	ENSFALG00000010805	RBM38	89	66.477	Ficedula_albicollis
ENSOMEG00000006805	rbm38	84	63.850	ENSFHEG00000006160	-	99	59.766	Fundulus_heteroclitus
ENSOMEG00000006805	rbm38	100	82.540	ENSFHEG00000017748	rbm38	100	82.540	Fundulus_heteroclitus
ENSOMEG00000006805	rbm38	75	64.921	ENSGMOG00000016655	-	100	67.539	Gadus_morhua
ENSOMEG00000006805	rbm38	93	55.230	ENSGALG00000026081	RBM38	100	54.812	Gallus_gallus
ENSOMEG00000006805	rbm38	93	70.940	ENSGACG00000015224	rbm38	100	70.940	Gasterosteus_aculeatus
ENSOMEG00000006805	rbm38	91	58.442	ENSGACG00000009873	-	97	58.442	Gasterosteus_aculeatus
ENSOMEG00000006805	rbm38	93	56.485	ENSGAGG00000001187	RBM38	100	56.485	Gopherus_agassizii
ENSOMEG00000006805	rbm38	100	81.275	ENSHBUG00000012058	rbm38	100	81.275	Haplochromis_burtoni
ENSOMEG00000006805	rbm38	98	60.870	ENSHBUG00000011778	-	100	59.921	Haplochromis_burtoni
ENSOMEG00000006805	rbm38	79	61.881	ENSHGLG00000015077	RBM38	90	56.067	Heterocephalus_glaber_female
ENSOMEG00000006805	rbm38	100	59.127	ENSHCOG00000019040	rbm38	100	59.127	Hippocampus_comes
ENSOMEG00000006805	rbm38	85	63.256	ENSHCOG00000005622	-	60	64.186	Hippocampus_comes
ENSOMEG00000006805	rbm38	92	58.798	ENSIPUG00000019349	-	92	58.798	Ictalurus_punctatus
ENSOMEG00000006805	rbm38	91	70.763	ENSKMAG00000012402	rbm38	99	70.763	Kryptolebias_marmoratus
ENSOMEG00000006805	rbm38	100	81.673	ENSLBEG00000018878	rbm38	100	81.673	Labrus_bergylta
ENSOMEG00000006805	rbm38	98	59.524	ENSLBEG00000016163	RBM38	99	60.000	Labrus_bergylta
ENSOMEG00000006805	rbm38	98	58.635	ENSLOCG00000003456	rbm38	100	58.635	Lepisosteus_oculatus
ENSOMEG00000006805	rbm38	77	61.929	ENSMFAG00000043808	RBM38	80	84.694	Macaca_fascicularis
ENSOMEG00000006805	rbm38	77	61.929	ENSMMUG00000031391	RBM38	80	84.694	Macaca_mulatta
ENSOMEG00000006805	rbm38	77	61.929	ENSMNEG00000034683	RBM38	80	84.694	Macaca_nemestrina
ENSOMEG00000006805	rbm38	100	82.072	ENSMAMG00000024135	rbm38	100	82.072	Mastacembelus_armatus
ENSOMEG00000006805	rbm38	98	59.363	ENSMAMG00000020499	RBM38	99	60.317	Mastacembelus_armatus
ENSOMEG00000006805	rbm38	100	81.275	ENSMZEG00005026036	rbm38	100	81.275	Maylandia_zebra
ENSOMEG00000006805	rbm38	98	60.870	ENSMZEG00005000849	-	100	59.921	Maylandia_zebra
ENSOMEG00000006805	rbm38	72	64.481	ENSMAUG00000021211	Rbm38	89	57.692	Mesocricetus_auratus
ENSOMEG00000006805	rbm38	93	55.230	ENSMICG00000038011	RBM38	100	55.230	Microcebus_murinus
ENSOMEG00000006805	rbm38	72	63.934	ENSMOCG00000008715	Rbm38	89	57.265	Microtus_ochrogaster
ENSOMEG00000006805	rbm38	98	60.400	ENSMMOG00000020051	-	99	60.474	Mola_mola
ENSOMEG00000006805	rbm38	78	60.804	ENSMODG00000016458	RBM38	94	54.321	Monodelphis_domestica
ENSOMEG00000006805	rbm38	75	68.421	ENSMALG00000004680	RBM38	84	62.054	Monopterus_albus
ENSOMEG00000006805	rbm38	100	66.534	ENSMALG00000022327	rbm38	100	68.924	Monopterus_albus
ENSOMEG00000006805	rbm38	91	55.128	MGP_CAROLIEiJ_G0024745	Rbm38	89	55.128	Mus_caroli
ENSOMEG00000006805	rbm38	91	55.128	ENSMUSG00000027510	Rbm38	89	55.128	Mus_musculus
ENSOMEG00000006805	rbm38	91	55.128	MGP_PahariEiJ_G0026186	Rbm38	89	55.128	Mus_pahari
ENSOMEG00000006805	rbm38	91	55.128	MGP_SPRETEiJ_G0025665	Rbm38	89	55.128	Mus_spretus
ENSOMEG00000006805	rbm38	74	63.298	ENSMPUG00000006518	RBM38	98	60.976	Mustela_putorius_furo
ENSOMEG00000006805	rbm38	76	62.051	ENSMLUG00000011140	RBM38	88	62.051	Myotis_lucifugus
ENSOMEG00000006805	rbm38	100	80.876	ENSNBRG00000022685	rbm38	100	80.876	Neolamprologus_brichardi
ENSOMEG00000006805	rbm38	98	60.870	ENSNBRG00000022545	-	99	60.870	Neolamprologus_brichardi
ENSOMEG00000006805	rbm38	52	67.176	ENSMEUG00000005475	-	96	67.176	Notamacropus_eugenii
ENSOMEG00000006805	rbm38	91	55.983	ENSODEG00000007980	RBM38	89	55.983	Octodon_degus
ENSOMEG00000006805	rbm38	98	81.301	ENSONIG00000017073	rbm38	100	81.301	Oreochromis_niloticus
ENSOMEG00000006805	rbm38	96	61.633	ENSONIG00000020324	-	96	61.633	Oreochromis_niloticus
ENSOMEG00000006805	rbm38	91	55.128	ENSOANG00000009259	RBM38	81	55.128	Ornithorhynchus_anatinus
ENSOMEG00000006805	rbm38	98	58.333	ENSORLG00000027180	-	99	59.289	Oryzias_latipes
ENSOMEG00000006805	rbm38	100	94.422	ENSORLG00000012154	rbm38	100	94.422	Oryzias_latipes
ENSOMEG00000006805	rbm38	98	58.333	ENSORLG00020020751	-	99	59.289	Oryzias_latipes_hni
ENSOMEG00000006805	rbm38	100	95.219	ENSORLG00020017871	rbm38	100	95.219	Oryzias_latipes_hni
ENSOMEG00000006805	rbm38	98	58.498	ENSORLG00015017040	-	99	59.761	Oryzias_latipes_hsok
ENSOMEG00000006805	rbm38	100	95.219	ENSORLG00015012606	rbm38	100	95.219	Oryzias_latipes_hsok
ENSOMEG00000006805	rbm38	91	55.983	ENSOGAG00000029136	RBM38	88	55.983	Otolemur_garnettii
ENSOMEG00000006805	rbm38	74	62.766	ENSPPRG00000009507	RBM38	80	83.673	Panthera_pardus
ENSOMEG00000006805	rbm38	75	62.500	ENSPTRG00000013661	RBM38	80	84.694	Pan_troglodytes
ENSOMEG00000006805	rbm38	50	78.400	ENSPTRG00000045845	-	68	78.400	Pan_troglodytes
ENSOMEG00000006805	rbm38	77	61.929	ENSPANG00000020919	-	80	84.694	Papio_anubis
ENSOMEG00000006805	rbm38	95	46.122	ENSPANG00000033127	-	96	46.122	Papio_anubis
ENSOMEG00000006805	rbm38	93	57.806	ENSPKIG00000018122	-	100	78.632	Paramormyrops_kingsleyae
ENSOMEG00000006805	rbm38	100	54.688	ENSPKIG00000025417	rbm38	99	57.540	Paramormyrops_kingsleyae
ENSOMEG00000006805	rbm38	93	55.649	ENSPSIG00000011649	RBM38	92	55.649	Pelodiscus_sinensis
ENSOMEG00000006805	rbm38	98	59.127	ENSPMGG00000017094	-	99	59.127	Periophthalmus_magnuspinnatus
ENSOMEG00000006805	rbm38	100	70.635	ENSPMGG00000011343	rbm38	100	72.619	Periophthalmus_magnuspinnatus
ENSOMEG00000006805	rbm38	80	60.488	ENSPCIG00000013648	RBM38	85	60.488	Phascolarctos_cinereus
ENSOMEG00000006805	rbm38	100	79.608	ENSPFOG00000011658	rbm38	100	83.529	Poecilia_formosa
ENSOMEG00000006805	rbm38	96	61.382	ENSPLAG00000002500	-	99	60.956	Poecilia_latipinna
ENSOMEG00000006805	rbm38	100	79.216	ENSPLAG00000005218	rbm38	100	83.137	Poecilia_latipinna
ENSOMEG00000006805	rbm38	100	78.431	ENSPMEG00000015770	rbm38	100	83.137	Poecilia_mexicana
ENSOMEG00000006805	rbm38	100	79.216	ENSPREG00000007398	rbm38	100	83.137	Poecilia_reticulata
ENSOMEG00000006805	rbm38	91	55.983	ENSPCOG00000026201	RBM38	83	82.353	Propithecus_coquereli
ENSOMEG00000006805	rbm38	72	39.344	ENSPVAG00000006457	RBM38	89	37.179	Pteropus_vampyrus
ENSOMEG00000006805	rbm38	98	60.870	ENSPNYG00000019727	-	100	82.051	Pundamilia_nyererei
ENSOMEG00000006805	rbm38	100	80.876	ENSPNYG00000021373	rbm38	100	80.876	Pundamilia_nyererei
ENSOMEG00000006805	rbm38	94	57.787	ENSPNAG00000010596	rbm38	95	57.787	Pygocentrus_nattereri
ENSOMEG00000006805	rbm38	96	60.494	ENSPNAG00000015123	-	91	79.661	Pygocentrus_nattereri
ENSOMEG00000006805	rbm38	79	62.376	ENSRNOG00000006420	Rbm38	83	62.376	Rattus_norvegicus
ENSOMEG00000006805	rbm38	93	50.000	ENSRROG00000036388	-	89	50.000	Rhinopithecus_roxellana
ENSOMEG00000006805	rbm38	93	54.812	ENSSBOG00000031053	RBM38	91	84.694	Saimiri_boliviensis_boliviensis
ENSOMEG00000006805	rbm38	94	57.083	ENSSFOG00015004453	rbm38	95	60.417	Scleropages_formosus
ENSOMEG00000006805	rbm38	98	59.921	ENSSDUG00000021082	RBM38	99	61.265	Seriola_dumerili
ENSOMEG00000006805	rbm38	100	83.267	ENSSDUG00000022611	rbm38	100	83.267	Seriola_dumerili
ENSOMEG00000006805	rbm38	98	60.317	ENSSLDG00000011778	RBM38	100	61.176	Seriola_lalandi_dorsalis
ENSOMEG00000006805	rbm38	100	83.267	ENSSLDG00000010845	rbm38	100	83.267	Seriola_lalandi_dorsalis
ENSOMEG00000006805	rbm38	100	85.259	ENSSPAG00000011113	rbm38	100	85.259	Stegastes_partitus
ENSOMEG00000006805	rbm38	98	60.317	ENSSPAG00000020989	RBM38	99	60.870	Stegastes_partitus
ENSOMEG00000006805	rbm38	91	55.556	ENSSSCG00000007504	RBM38	89	55.556	Sus_scrofa
ENSOMEG00000006805	rbm38	96	60.246	ENSTRUG00000019869	-	99	60.400	Takifugu_rubripes
ENSOMEG00000006805	rbm38	100	72.510	ENSTRUG00000024954	rbm38	100	74.900	Takifugu_rubripes
ENSOMEG00000006805	rbm38	91	63.636	ENSTNIG00000007093	-	100	62.343	Tetraodon_nigroviridis
ENSOMEG00000006805	rbm38	74	62.766	ENSUAMG00000019780	RBM38	90	55.230	Ursus_americanus
ENSOMEG00000006805	rbm38	91	55.983	ENSVVUG00000017246	RBM38	89	55.983	Vulpes_vulpes
ENSOMEG00000006805	rbm38	76	61.538	ENSXETG00000011268	rbm38	99	54.959	Xenopus_tropicalis
ENSOMEG00000006805	rbm38	100	80.876	ENSXMAG00000023662	rbm38	100	84.861	Xiphophorus_maculatus