EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000006888 (Gene tree)
Gene ID: 112140722
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 3399 bases
Position: chrNVQA01005532.1:18699-22097
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000025566	GTP_EFTU	PF00009.27	1.7e-38	1	1
ENSOMEP00000025566	GTP_EFTU_D2	PF03144.25	5e-14	1	1
ENSOMEP00000025566	GTP_EFTU_D3	PF03143.17	1.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000006798	-	1245	-	ENSOMEP00000025566	414 (aa)	-	UPI000CF83BBE

Gene Model

Click here to download ENSOMEG00000006888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000006888	-	95	36.111	ENSOMEG00000002739	gspt1l	68	36.111
ENSOMEG00000006888	-	100	100.000	ENSOMEG00000018209	-	90	100.000
ENSOMEG00000006888	-	95	71.139	ENSOMEG00000001868	si:dkey-37o8.1	87	71.139
ENSOMEG00000006888	-	95	38.832	ENSOMEG00000016715	hbs1l	55	38.832
ENSOMEG00000006888	-	97	90.750	ENSOMEG00000018226	-	90	89.855
ENSOMEG00000006888	-	100	89.614	ENSOMEG00000023456	eef1a1b	90	89.614
ENSOMEG00000006888	-	95	36.111	ENSOMEG00000008108	-	73	36.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006888	-	74	96.753	ENSAPOG00000004757	eef1a1l1	100	96.753	Acanthochromis_polyacanthus
ENSOMEG00000006888	-	99	75.787	ENSAMEG00000004317	-	89	75.787	Ailuropoda_melanoleuca
ENSOMEG00000006888	-	99	84.746	ENSAMEG00000009677	-	90	84.746	Ailuropoda_melanoleuca
ENSOMEG00000006888	-	99	85.714	ENSCAFG00000013249	-	90	85.714	Canis_familiaris
ENSOMEG00000006888	-	99	85.714	ENSCAFG00020020007	-	90	85.714	Canis_lupus_dingo
ENSOMEG00000006888	-	99	88.620	ENSCPBG00000000748	-	90	88.620	Chrysemys_picta_bellii
ENSOMEG00000006888	-	99	87.651	ENSCPBG00000000646	-	90	87.651	Chrysemys_picta_bellii
ENSOMEG00000006888	-	100	93.478	ENSDARG00000020850	eef1a1l1	90	93.478	Danio_rerio
ENSOMEG00000006888	-	99	87.042	ENSEASG00005012365	-	99	85.714	Equus_asinus_asinus
ENSOMEG00000006888	-	95	83.503	ENSEASG00005018013	-	99	83.503	Equus_asinus_asinus
ENSOMEG00000006888	-	99	85.472	ENSECAG00000022260	-	89	85.472	Equus_caballus
ENSOMEG00000006888	-	99	90.073	ENSELUG00000023536	eef1a1l1	90	90.073	Esox_lucius
ENSOMEG00000006888	-	99	87.651	ENSFCAG00000030530	-	90	87.651	Felis_catus
ENSOMEG00000006888	-	99	88.620	ENSGAGG00000000642	-	90	88.620	Gopherus_agassizii
ENSOMEG00000006888	-	99	87.893	ENSGAGG00000000648	-	90	87.893	Gopherus_agassizii
ENSOMEG00000006888	-	100	95.652	ENSLBEG00000002790	eef1a1l1	100	95.652	Labrus_bergylta
ENSOMEG00000006888	-	99	86.199	ENSLAFG00000025161	-	90	86.199	Loxodonta_africana
ENSOMEG00000006888	-	99	86.683	ENSLAFG00000028081	-	89	86.683	Loxodonta_africana
ENSOMEG00000006888	-	71	90.268	ENSOANG00000012066	-	86	90.268	Ornithorhynchus_anatinus
ENSOMEG00000006888	-	99	86.441	ENSOARG00000002943	-	90	86.441	Ovis_aries
ENSOMEG00000006888	-	97	87.500	ENSPPRG00000005678	-	86	87.500	Panthera_pardus
ENSOMEG00000006888	-	99	83.051	ENSPPRG00000008525	-	89	83.051	Panthera_pardus
ENSOMEG00000006888	-	99	85.230	ENSPTIG00000006939	-	90	85.230	Panthera_tigris_altaica
ENSOMEG00000006888	-	99	87.651	ENSPSIG00000008610	-	90	87.651	Pelodiscus_sinensis
ENSOMEG00000006888	-	62	98.333	ENSPVAG00000007682	-	54	98.333	Pteropus_vampyrus
ENSOMEG00000006888	-	100	83.333	ENSSMAG00000018455	-	89	83.333	Scophthalmus_maximus
ENSOMEG00000006888	-	99	87.409	ENSSPUG00000003655	-	90	87.409	Sphenodon_punctatus
ENSOMEG00000006888	-	98	81.683	ENSSSCG00000038035	-	89	81.356	Sus_scrofa
ENSOMEG00000006888	-	99	86.441	ENSSSCG00000034113	-	90	86.441	Sus_scrofa
ENSOMEG00000006888	-	95	77.157	ENSUAMG00000007676	-	87	77.157	Ursus_americanus
ENSOMEG00000006888	-	57	81.702	ENSUAMG00000006085	-	98	81.702	Ursus_americanus
ENSOMEG00000006888	-	99	85.230	ENSUAMG00000008928	-	90	85.230	Ursus_americanus
ENSOMEG00000006888	-	99	84.746	ENSUMAG00000013211	-	90	84.746	Ursus_maritimus
ENSOMEG00000006888	-	99	85.472	ENSVVUG00000026886	-	90	85.472	Vulpes_vulpes
ENSOMEG00000006888	-	99	88.862	ENSXETG00000022604	eef1a1o	90	88.862	Xenopus_tropicalis