EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000006903 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 1522 bases
Position: chrNVQA01000016.1:24319105-24320626
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005872	RRM_1	PF00076.22	2.4e-45	1	3
ENSOMEP00000005872	RRM_1	PF00076.22	2.4e-45	2	3
ENSOMEP00000005872	RRM_1	PF00076.22	2.4e-45	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000006751	-	1489	-	ENSOMEP00000005872	470 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000006903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006903's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000006903	-	63	44.000	ENSOMEG00000018558	hnrnpd	73	44.000
ENSOMEG00000006903	-	95	90.830	ENSOMEG00000002509	-	99	90.830
ENSOMEG00000006903	-	94	91.648	ENSOMEG00000021030	-	100	91.648
ENSOMEG00000006903	-	80	66.667	ENSOMEG00000011670	-	96	66.667
ENSOMEG00000006903	-	77	80.000	ENSOMEG00000002084	-	71	80.000
ENSOMEG00000006903	-	97	71.579	ENSOMEG00000002000	-	100	71.789
ENSOMEG00000006903	-	69	38.462	ENSOMEG00000002272	-	55	43.902
ENSOMEG00000006903	-	67	92.308	ENSOMEG00000009566	-	87	92.308
ENSOMEG00000006903	-	100	89.189	ENSOMEG00000023475	-	100	89.189
ENSOMEG00000006903	-	63	48.087	ENSOMEG00000015959	-	87	42.529
ENSOMEG00000006903	-	93	78.151	ENSOMEG00000006327	-	95	84.507
ENSOMEG00000006903	-	58	39.773	ENSOMEG00000003120	dazap1	65	39.773
ENSOMEG00000006903	-	70	61.719	ENSOMEG00000002091	-	98	57.477
ENSOMEG00000006903	-	100	89.813	ENSOMEG00000012368	-	100	89.813
ENSOMEG00000006903	-	51	42.667	ENSOMEG00000021469	cirbpa	74	39.216
ENSOMEG00000006903	-	85	68.182	ENSOMEG00000013637	-	100	68.182
ENSOMEG00000006903	-	60	45.902	ENSOMEG00000004838	hnrnpa3	83	40.756
ENSOMEG00000006903	-	59	40.789	ENSOMEG00000005936	hnrnpaba	88	34.127
ENSOMEG00000006903	-	59	42.857	ENSOMEG00000023772	hnrnpabb	76	42.857
ENSOMEG00000006903	-	83	35.593	ENSOMEG00000000146	msi2a	59	37.500
ENSOMEG00000006903	-	73	35.912	ENSOMEG00000017536	MSI1	64	37.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006903	-	76	57.222	ENSAOCG00000015914	-	72	56.684	Amphiprion_ocellaris
ENSOMEG00000006903	-	77	65.031	ENSAOCG00000015951	-	96	65.031	Amphiprion_ocellaris
ENSOMEG00000006903	-	77	65.031	ENSAPEG00000002274	-	96	65.031	Amphiprion_percula
ENSOMEG00000006903	-	69	57.222	ENSAPEG00000002224	-	84	56.684	Amphiprion_percula
ENSOMEG00000006903	-	66	57.778	ENSACLG00000008978	-	97	52.727	Astatotilapia_calliptera
ENSOMEG00000006903	-	69	58.333	ENSCVAG00000008324	-	90	52.252	Cyprinodon_variegatus
ENSOMEG00000006903	-	67	43.103	FBgn0004237	Hrb87F	56	40.000	Drosophila_melanogaster
ENSOMEG00000006903	-	57	43.605	FBgn0001215	Hrb98DE	85	38.007	Drosophila_melanogaster
ENSOMEG00000006903	-	57	37.079	ENSEBUG00000010003	-	90	37.079	Eptatretus_burgeri
ENSOMEG00000006903	-	66	57.229	ENSELUG00000014407	-	97	57.229	Esox_lucius
ENSOMEG00000006903	-	66	57.778	ENSHBUG00000023867	-	97	52.727	Haplochromis_burtoni
ENSOMEG00000006903	-	67	55.000	ENSHCOG00000007180	-	95	50.439	Hippocampus_comes
ENSOMEG00000006903	-	73	54.762	ENSLBEG00000006362	-	79	54.762	Labrus_bergylta
ENSOMEG00000006903	-	63	54.032	ENSLOCG00000012121	-	66	54.032	Lepisosteus_oculatus
ENSOMEG00000006903	-	69	55.000	ENSMAMG00000017728	-	96	48.872	Mastacembelus_armatus
ENSOMEG00000006903	-	66	57.778	ENSMZEG00005001063	-	82	57.065	Maylandia_zebra
ENSOMEG00000006903	-	77	60.606	ENSMMOG00000004242	-	98	60.976	Mola_mola
ENSOMEG00000006903	-	76	40.805	ENSMEUG00000003051	-	84	36.719	Notamacropus_eugenii
ENSOMEG00000006903	-	85	60.606	ENSORLG00000023542	-	96	56.502	Oryzias_latipes
ENSOMEG00000006903	-	87	59.048	ENSORLG00000023176	-	99	56.957	Oryzias_latipes
ENSOMEG00000006903	-	79	57.463	ENSORLG00000030284	-	84	57.463	Oryzias_latipes
ENSOMEG00000006903	-	77	63.030	ENSORLG00020007084	-	75	63.030	Oryzias_latipes_hni
ENSOMEG00000006903	-	79	66.471	ENSORLG00020006029	-	94	66.471	Oryzias_latipes_hni
ENSOMEG00000006903	-	82	55.682	ENSORLG00020007171	-	98	55.682	Oryzias_latipes_hni
ENSOMEG00000006903	-	69	58.333	ENSPREG00000010603	-	70	52.273	Poecilia_reticulata
ENSOMEG00000006903	-	66	57.778	ENSPNYG00000020763	-	97	52.727	Pundamilia_nyererei
ENSOMEG00000006903	-	67	54.878	ENSPNAG00000018051	-	81	54.545	Pygocentrus_nattereri
ENSOMEG00000006903	-	66	52.601	ENSSHAG00000015609	-	99	46.903	Sarcophilus_harrisii
ENSOMEG00000006903	-	73	54.167	ENSSDUG00000002394	-	87	54.167	Seriola_dumerili
ENSOMEG00000006903	-	75	65.132	ENSSLDG00000024685	-	85	65.132	Seriola_lalandi_dorsalis