EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000006915 (Gene tree)
Gene ID: 112143336
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 17734 bases
Position: chrNVQA01000006.1:19777682-19795415
Accession: 112143336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005880	POP1	PF06978.11	5.7e-37	1	2
ENSOMEP00000005880	POP1	PF06978.11	5.7e-37	2	2
ENSOMEP00000005880	POPLD	PF08170.12	2.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000006736	-	8548	-	ENSOMEP00000005880	935 (aa)	XP_024122987	UPI000CF7B55A

Gene Model

Click here to download ENSOMEG00000006915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006915's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006915	pop1	99	47.485	ENSG00000104356	POP1	100	47.969	Homo_sapiens
ENSOMEG00000006915	pop1	99	72.081	ENSAPOG00000008198	pop1	100	72.081	Acanthochromis_polyacanthus
ENSOMEG00000006915	pop1	99	47.440	ENSAMEG00000000556	POP1	100	47.236	Ailuropoda_melanoleuca
ENSOMEG00000006915	pop1	99	67.593	ENSACIG00000004169	POP1	100	66.598	Amphilophus_citrinellus
ENSOMEG00000006915	pop1	99	71.777	ENSAOCG00000010991	pop1	100	71.878	Amphiprion_ocellaris
ENSOMEG00000006915	pop1	99	65.992	ENSAPEG00000007607	pop1	100	65.789	Amphiprion_percula
ENSOMEG00000006915	pop1	99	71.268	ENSATEG00000024814	POP1	100	71.268	Anabas_testudineus
ENSOMEG00000006915	pop1	95	50.907	ENSAPLG00000014418	POP1	99	50.905	Anas_platyrhynchos
ENSOMEG00000006915	pop1	98	47.890	ENSACAG00000016083	POP1	100	47.241	Anolis_carolinensis
ENSOMEG00000006915	pop1	86	53.636	ENSANAG00000026360	POP1	99	53.636	Aotus_nancymaae
ENSOMEG00000006915	pop1	99	70.213	ENSACLG00000010951	pop1	100	70.415	Astatotilapia_calliptera
ENSOMEG00000006915	pop1	99	55.294	ENSAMXG00000014483	POP1	100	55.294	Astyanax_mexicanus
ENSOMEG00000006915	pop1	99	47.559	ENSBTAG00000012596	POP1	100	48.145	Bos_taurus
ENSOMEG00000006915	pop1	64	31.801	WBGene00015486	C05D11.9	61	33.937	Caenorhabditis_elegans
ENSOMEG00000006915	pop1	99	47.652	ENSCJAG00000015567	POP1	100	48.043	Callithrix_jacchus
ENSOMEG00000006915	pop1	99	48.400	ENSCAFG00000000469	POP1	100	48.300	Canis_familiaris
ENSOMEG00000006915	pop1	99	47.368	ENSCAFG00020026765	POP1	100	47.271	Canis_lupus_dingo
ENSOMEG00000006915	pop1	99	47.656	ENSCHIG00000017066	POP1	100	47.852	Capra_hircus
ENSOMEG00000006915	pop1	99	46.302	ENSTSYG00000003097	POP1	100	47.241	Carlito_syrichta
ENSOMEG00000006915	pop1	99	46.146	ENSCAPG00000007251	POP1	100	46.049	Cavia_aperea
ENSOMEG00000006915	pop1	99	47.554	ENSCPOG00000002901	POP1	100	47.456	Cavia_porcellus
ENSOMEG00000006915	pop1	99	48.627	ENSCCAG00000018939	POP1	100	48.279	Cebus_capucinus
ENSOMEG00000006915	pop1	99	47.338	ENSCATG00000040916	POP1	100	47.008	Cercocebus_atys
ENSOMEG00000006915	pop1	99	47.661	ENSCLAG00000007208	POP1	97	47.563	Chinchilla_lanigera
ENSOMEG00000006915	pop1	92	49.464	ENSCSAG00000012340	POP1	98	48.971	Chlorocebus_sabaeus
ENSOMEG00000006915	pop1	94	46.730	ENSCHOG00000011432	POP1	96	46.519	Choloepus_hoffmanni
ENSOMEG00000006915	pop1	99	50.098	ENSCPBG00000006373	POP1	100	50.295	Chrysemys_picta_bellii
ENSOMEG00000006915	pop1	99	47.435	ENSCANG00000001647	POP1	100	47.104	Colobus_angolensis_palliatus
ENSOMEG00000006915	pop1	99	46.169	ENSCGRG00001017308	Pop1	100	46.562	Cricetulus_griseus_chok1gshd
ENSOMEG00000006915	pop1	99	43.587	ENSCGRG00000010824	Pop1	100	44.008	Cricetulus_griseus_crigri
ENSOMEG00000006915	pop1	99	67.647	ENSCSEG00000008737	POP1	100	67.748	Cynoglossus_semilaevis
ENSOMEG00000006915	pop1	99	68.980	ENSCVAG00000022248	pop1	100	68.615	Cyprinodon_variegatus
ENSOMEG00000006915	pop1	53	53.908	ENSDARG00000102087	pop1	99	54.108	Danio_rerio
ENSOMEG00000006915	pop1	99	44.570	ENSDNOG00000019974	POP1	100	44.476	Dasypus_novemcinctus
ENSOMEG00000006915	pop1	99	41.764	ENSDORG00000015384	Pop1	100	42.064	Dipodomys_ordii
ENSOMEG00000006915	pop1	87	46.274	ENSETEG00000007839	POP1	88	46.274	Echinops_telfairi
ENSOMEG00000006915	pop1	53	43.775	ENSEBUG00000009897	pop1	96	43.775	Eptatretus_burgeri
ENSOMEG00000006915	pop1	99	47.522	ENSEASG00005003189	POP1	98	47.619	Equus_asinus_asinus
ENSOMEG00000006915	pop1	99	47.864	ENSECAG00000024236	POP1	100	47.716	Equus_caballus
ENSOMEG00000006915	pop1	50	74.026	ENSEEUG00000003050	-	53	78.788	Erinaceus_europaeus
ENSOMEG00000006915	pop1	99	60.914	ENSELUG00000003526	pop1	100	61.122	Esox_lucius
ENSOMEG00000006915	pop1	99	47.225	ENSFCAG00000002168	POP1	100	47.225	Felis_catus
ENSOMEG00000006915	pop1	99	47.317	ENSFALG00000005711	POP1	100	48.188	Ficedula_albicollis
ENSOMEG00000006915	pop1	99	47.282	ENSFDAG00000017068	POP1	100	47.379	Fukomys_damarensis
ENSOMEG00000006915	pop1	99	68.891	ENSFHEG00000019518	pop1	100	68.994	Fundulus_heteroclitus
ENSOMEG00000006915	pop1	99	61.083	ENSGMOG00000000659	POP1	100	60.674	Gadus_morhua
ENSOMEG00000006915	pop1	99	69.462	ENSGAFG00000019770	POP1	100	68.841	Gambusia_affinis
ENSOMEG00000006915	pop1	99	62.246	ENSGACG00000003499	pop1	100	62.052	Gasterosteus_aculeatus
ENSOMEG00000006915	pop1	100	49.414	ENSGAGG00000011737	POP1	98	49.559	Gopherus_agassizii
ENSOMEG00000006915	pop1	99	47.287	ENSGGOG00000003176	POP1	100	48.066	Gorilla_gorilla
ENSOMEG00000006915	pop1	99	70.618	ENSHBUG00000021583	pop1	100	70.618	Haplochromis_burtoni
ENSOMEG00000006915	pop1	99	47.389	ENSHGLG00000006029	POP1	100	47.195	Heterocephalus_glaber_female
ENSOMEG00000006915	pop1	99	47.389	ENSHGLG00100016879	POP1	100	47.195	Heterocephalus_glaber_male
ENSOMEG00000006915	pop1	99	62.575	ENSHCOG00000013888	pop1	100	61.531	Hippocampus_comes
ENSOMEG00000006915	pop1	99	54.797	ENSIPUG00000018336	pop1	100	54.599	Ictalurus_punctatus
ENSOMEG00000006915	pop1	99	47.287	ENSSTOG00000011455	POP1	97	47.093	Ictidomys_tridecemlineatus
ENSOMEG00000006915	pop1	99	46.726	ENSJJAG00000013325	Pop1	100	46.351	Jaculus_jaculus
ENSOMEG00000006915	pop1	99	72.349	ENSKMAG00000001346	POP1	100	72.349	Kryptolebias_marmoratus
ENSOMEG00000006915	pop1	99	63.392	ENSLBEG00000024457	POP1	100	63.316	Labrus_bergylta
ENSOMEG00000006915	pop1	93	51.699	ENSLACG00000012498	POP1	97	51.374	Latimeria_chalumnae
ENSOMEG00000006915	pop1	99	54.134	ENSLOCG00000009817	POP1	100	54.626	Lepisosteus_oculatus
ENSOMEG00000006915	pop1	99	47.712	ENSLAFG00000010770	POP1	100	47.915	Loxodonta_africana
ENSOMEG00000006915	pop1	99	47.059	ENSMFAG00000000347	POP1	100	47.008	Macaca_fascicularis
ENSOMEG00000006915	pop1	99	46.673	ENSMNEG00000036870	POP1	100	46.815	Macaca_nemestrina
ENSOMEG00000006915	pop1	99	47.155	ENSMLEG00000034986	POP1	100	47.104	Mandrillus_leucophaeus
ENSOMEG00000006915	pop1	99	70.618	ENSMAMG00000004040	pop1	100	70.010	Mastacembelus_armatus
ENSOMEG00000006915	pop1	99	70.314	ENSMZEG00005025448	pop1	100	70.314	Maylandia_zebra
ENSOMEG00000006915	pop1	99	47.464	ENSMGAG00000012167	POP1	100	48.081	Meleagris_gallopavo
ENSOMEG00000006915	pop1	99	46.660	ENSMAUG00000017537	Pop1	100	46.706	Mesocricetus_auratus
ENSOMEG00000006915	pop1	99	47.201	ENSMICG00000004361	POP1	100	46.660	Microcebus_murinus
ENSOMEG00000006915	pop1	99	46.575	ENSMOCG00000006356	Pop1	100	47.013	Microtus_ochrogaster
ENSOMEG00000006915	pop1	99	63.333	ENSMMOG00000018242	pop1	100	63.466	Mola_mola
ENSOMEG00000006915	pop1	99	47.738	ENSMODG00000006561	POP1	100	46.616	Monodelphis_domestica
ENSOMEG00000006915	pop1	99	68.948	ENSMALG00000012621	POP1	100	69.184	Monopterus_albus
ENSOMEG00000006915	pop1	99	46.266	MGP_CAROLIEiJ_G0019726	Pop1	100	46.667	Mus_caroli
ENSOMEG00000006915	pop1	99	45.340	ENSMUSG00000022325	Pop1	100	46.214	Mus_musculus
ENSOMEG00000006915	pop1	99	46.004	MGP_PahariEiJ_G0019735	Pop1	100	46.394	Mus_pahari
ENSOMEG00000006915	pop1	99	45.605	MGP_SPRETEiJ_G0020622	Pop1	100	46.206	Mus_spretus
ENSOMEG00000006915	pop1	99	47.384	ENSMPUG00000015250	POP1	100	47.042	Mustela_putorius_furo
ENSOMEG00000006915	pop1	99	44.778	ENSMLUG00000010204	POP1	100	44.884	Myotis_lucifugus
ENSOMEG00000006915	pop1	99	46.647	ENSNGAG00000001582	Pop1	100	47.133	Nannospalax_galili
ENSOMEG00000006915	pop1	99	66.187	ENSNBRG00000002356	pop1	100	65.302	Neolamprologus_brichardi
ENSOMEG00000006915	pop1	99	47.485	ENSNLEG00000002541	POP1	100	48.259	Nomascus_leucogenys
ENSOMEG00000006915	pop1	88	56.140	ENSMEUG00000003118	POP1	90	56.140	Notamacropus_eugenii
ENSOMEG00000006915	pop1	99	47.783	ENSOPRG00000007667	POP1	100	47.980	Ochotona_princeps
ENSOMEG00000006915	pop1	99	47.053	ENSODEG00000003984	POP1	100	46.570	Octodon_degus
ENSOMEG00000006915	pop1	99	71.023	ENSONIG00000016445	pop1	100	71.023	Oreochromis_niloticus
ENSOMEG00000006915	pop1	63	48.207	ENSOANG00000001278	-	94	48.207	Ornithorhynchus_anatinus
ENSOMEG00000006915	pop1	99	46.184	ENSOCUG00000017400	POP1	100	46.339	Oryctolagus_cuniculus
ENSOMEG00000006915	pop1	99	86.548	ENSORLG00000002839	pop1	100	86.444	Oryzias_latipes
ENSOMEG00000006915	pop1	99	77.079	ENSORLG00020022450	POP1	100	76.673	Oryzias_latipes_hni
ENSOMEG00000006915	pop1	99	86.979	ENSORLG00015012746	POP1	100	86.875	Oryzias_latipes_hsok
ENSOMEG00000006915	pop1	99	48.066	ENSOGAG00000001466	POP1	100	47.969	Otolemur_garnettii
ENSOMEG00000006915	pop1	99	47.144	ENSPPAG00000018410	POP1	100	47.476	Pan_paniscus
ENSOMEG00000006915	pop1	99	46.543	ENSPPRG00000005002	POP1	100	46.543	Panthera_pardus
ENSOMEG00000006915	pop1	99	46.446	ENSPTIG00000016527	POP1	100	46.543	Panthera_tigris_altaica
ENSOMEG00000006915	pop1	99	47.582	ENSPTRG00000020458	POP1	100	48.066	Pan_troglodytes
ENSOMEG00000006915	pop1	99	46.866	ENSPANG00000009704	POP1	100	46.815	Papio_anubis
ENSOMEG00000006915	pop1	99	59.470	ENSPKIG00000016325	POP1	100	59.054	Paramormyrops_kingsleyae
ENSOMEG00000006915	pop1	99	48.438	ENSPSIG00000012343	POP1	100	48.887	Pelodiscus_sinensis
ENSOMEG00000006915	pop1	99	61.421	ENSPMGG00000022253	POP1	100	60.812	Periophthalmus_magnuspinnatus
ENSOMEG00000006915	pop1	99	45.428	ENSPEMG00000023633	Pop1	100	45.717	Peromyscus_maniculatus_bairdii
ENSOMEG00000006915	pop1	92	42.842	ENSPMAG00000003209	POP1	99	42.812	Petromyzon_marinus
ENSOMEG00000006915	pop1	99	47.592	ENSPCIG00000012216	POP1	92	51.701	Phascolarctos_cinereus
ENSOMEG00000006915	pop1	99	69.845	ENSPFOG00000012490	POP1	100	69.223	Poecilia_formosa
ENSOMEG00000006915	pop1	99	69.534	ENSPLAG00000004646	POP1	100	68.912	Poecilia_latipinna
ENSOMEG00000006915	pop1	99	69.159	ENSPMEG00000019592	POP1	100	68.744	Poecilia_mexicana
ENSOMEG00000006915	pop1	99	70.010	ENSPREG00000020951	POP1	100	69.493	Poecilia_reticulata
ENSOMEG00000006915	pop1	99	47.440	ENSPPYG00000018777	POP1	100	47.969	Pongo_abelii
ENSOMEG00000006915	pop1	99	44.639	ENSPCAG00000016662	POP1	100	44.585	Procavia_capensis
ENSOMEG00000006915	pop1	99	47.139	ENSPCOG00000019420	POP1	100	47.328	Propithecus_coquereli
ENSOMEG00000006915	pop1	99	47.128	ENSPVAG00000014468	POP1	100	47.363	Pteropus_vampyrus
ENSOMEG00000006915	pop1	99	66.667	ENSPNYG00000004476	pop1	100	66.047	Pundamilia_nyererei
ENSOMEG00000006915	pop1	99	52.959	ENSPNAG00000000265	pop1	100	52.959	Pygocentrus_nattereri
ENSOMEG00000006915	pop1	99	45.695	ENSRNOG00000005243	Pop1	100	46.184	Rattus_norvegicus
ENSOMEG00000006915	pop1	99	47.531	ENSRBIG00000007996	POP1	100	47.201	Rhinopithecus_bieti
ENSOMEG00000006915	pop1	99	47.531	ENSRROG00000012334	POP1	100	47.201	Rhinopithecus_roxellana
ENSOMEG00000006915	pop1	93	49.734	ENSSBOG00000020830	POP1	92	50.159	Saimiri_boliviensis_boliviensis
ENSOMEG00000006915	pop1	99	49.082	ENSSHAG00000000296	POP1	100	48.792	Sarcophilus_harrisii
ENSOMEG00000006915	pop1	99	58.866	ENSSFOG00015007429	pop1	99	58.866	Scleropages_formosus
ENSOMEG00000006915	pop1	99	68.944	ENSSMAG00000010467	POP1	100	68.634	Scophthalmus_maximus
ENSOMEG00000006915	pop1	99	70.131	ENSSDUG00000007817	POP1	100	70.434	Seriola_dumerili
ENSOMEG00000006915	pop1	99	70.333	ENSSLDG00000012565	POP1	100	70.636	Seriola_lalandi_dorsalis
ENSOMEG00000006915	pop1	99	46.933	ENSSPUG00000003550	-	100	46.132	Sphenodon_punctatus
ENSOMEG00000006915	pop1	99	70.699	ENSSPAG00000014955	pop1	100	69.543	Stegastes_partitus
ENSOMEG00000006915	pop1	99	47.984	ENSSSCG00000006078	POP1	100	47.984	Sus_scrofa
ENSOMEG00000006915	pop1	95	45.493	ENSTGUG00000012011	-	100	45.127	Taeniopygia_guttata
ENSOMEG00000006915	pop1	99	66.289	ENSTRUG00000010856	pop1	100	66.289	Takifugu_rubripes
ENSOMEG00000006915	pop1	94	68.251	ENSTNIG00000013297	pop1	98	68.251	Tetraodon_nigroviridis
ENSOMEG00000006915	pop1	94	46.674	ENSTBEG00000014214	POP1	96	46.575	Tupaia_belangeri
ENSOMEG00000006915	pop1	99	46.356	ENSTTRG00000016071	POP1	100	46.453	Tursiops_truncatus
ENSOMEG00000006915	pop1	99	48.795	ENSUAMG00000017309	POP1	100	48.589	Ursus_americanus
ENSOMEG00000006915	pop1	99	46.911	ENSUMAG00000016952	POP1	100	50.800	Ursus_maritimus
ENSOMEG00000006915	pop1	85	50.542	ENSVPAG00000008278	POP1	82	50.542	Vicugna_pacos
ENSOMEG00000006915	pop1	99	47.368	ENSVVUG00000010994	POP1	100	47.271	Vulpes_vulpes
ENSOMEG00000006915	pop1	99	60.532	ENSXCOG00000017043	POP1	100	59.714	Xiphophorus_couchianus
ENSOMEG00000006915	pop1	99	69.223	ENSXMAG00000002472	POP1	100	68.983	Xiphophorus_maculatus