EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000006963 (Gene tree)
Gene ID: 112141493
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 7108 bases
Position: chrNVQA01006834.1:261037-268144
Accession: 112141493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000005923	ARS2	PF04959.13	6e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000006650	-	3980	-	ENSOMEP00000005923	836 (aa)	XP_024120407	UPI000CF7B53D

Gene Model

Click here to download ENSOMEG00000006963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000006963's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000006963	-	96	58.404	ENSOMEG00000003155	srrt	87	67.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000006963	-	53	65.517	ENSG00000087087	SRRT	98	69.565	Homo_sapiens
ENSOMEG00000006963	-	53	67.031	ENSAPOG00000002304	srrt	93	58.646	Acanthochromis_polyacanthus
ENSOMEG00000006963	-	95	55.413	ENSAMEG00000014506	SRRT	92	55.276	Ailuropoda_melanoleuca
ENSOMEG00000006963	-	94	58.706	ENSACIG00000015795	srrt	92	58.794	Amphilophus_citrinellus
ENSOMEG00000006963	-	94	58.933	ENSAOCG00000009693	srrt	93	58.454	Amphiprion_ocellaris
ENSOMEG00000006963	-	93	81.219	ENSAOCG00000009189	-	98	81.257	Amphiprion_ocellaris
ENSOMEG00000006963	-	93	81.095	ENSAPEG00000020016	-	98	81.139	Amphiprion_percula
ENSOMEG00000006963	-	79	67.281	ENSAPEG00000003646	srrt	93	58.232	Amphiprion_percula
ENSOMEG00000006963	-	60	85.465	ENSATEG00000003652	-	97	84.302	Anabas_testudineus
ENSOMEG00000006963	-	94	58.180	ENSATEG00000014425	srrt	85	67.174	Anabas_testudineus
ENSOMEG00000006963	-	54	63.889	ENSACAG00000001014	SRRT	93	54.423	Anolis_carolinensis
ENSOMEG00000006963	-	53	64.544	ENSANAG00000031718	SRRT	93	56.326	Aotus_nancymaae
ENSOMEG00000006963	-	53	66.812	ENSACLG00000013156	srrt	89	58.080	Astatotilapia_calliptera
ENSOMEG00000006963	-	93	78.175	ENSACLG00000009423	-	98	79.176	Astatotilapia_calliptera
ENSOMEG00000006963	-	52	65.198	ENSAMXG00000016671	srrt	89	56.280	Astyanax_mexicanus
ENSOMEG00000006963	-	53	64.331	ENSBTAG00000001134	SRRT	93	56.083	Bos_taurus
ENSOMEG00000006963	-	62	44.125	WBGene00017085	E01A2.2	88	40.702	Caenorhabditis_elegans
ENSOMEG00000006963	-	53	64.331	ENSCJAG00000014917	SRRT	93	56.204	Callithrix_jacchus
ENSOMEG00000006963	-	96	56.302	ENSCAFG00000023538	SRRT	93	55.865	Canis_familiaris
ENSOMEG00000006963	-	96	56.265	ENSCAFG00020013358	SRRT	97	55.309	Canis_lupus_dingo
ENSOMEG00000006963	-	53	64.119	ENSCHIG00000010495	SRRT	93	55.961	Capra_hircus
ENSOMEG00000006963	-	96	54.911	ENSTSYG00000036426	SRRT	96	55.637	Carlito_syrichta
ENSOMEG00000006963	-	53	65.293	ENSCAPG00000013586	SRRT	97	56.366	Cavia_aperea
ENSOMEG00000006963	-	53	64.195	ENSCPOG00000001739	SRRT	93	56.136	Cavia_porcellus
ENSOMEG00000006963	-	53	64.544	ENSCCAG00000015877	SRRT	93	56.326	Cebus_capucinus
ENSOMEG00000006963	-	53	64.544	ENSCATG00000036306	SRRT	93	56.638	Cercocebus_atys
ENSOMEG00000006963	-	96	55.714	ENSCLAG00000007568	SRRT	93	56.204	Chinchilla_lanigera
ENSOMEG00000006963	-	53	64.544	ENSCSAG00000017996	SRRT	93	56.448	Chlorocebus_sabaeus
ENSOMEG00000006963	-	52	65.693	ENSCHOG00000007815	SRRT	60	69.672	Choloepus_hoffmanni
ENSOMEG00000006963	-	70	60.731	ENSCPBG00000011553	SRRT	81	54.090	Chrysemys_picta_bellii
ENSOMEG00000006963	-	100	40.980	ENSCING00000003506	-	55	50.520	Ciona_intestinalis
ENSOMEG00000006963	-	100	39.313	ENSCSAVG00000008394	-	78	54.942	Ciona_savignyi
ENSOMEG00000006963	-	53	64.530	ENSCANG00000034556	SRRT	93	56.479	Colobus_angolensis_palliatus
ENSOMEG00000006963	-	96	56.419	ENSCGRG00001001594	Srrt	93	56.077	Cricetulus_griseus_chok1gshd
ENSOMEG00000006963	-	96	53.991	ENSCGRG00000007292	Srrt	89	59.619	Cricetulus_griseus_crigri
ENSOMEG00000006963	-	96	54.312	ENSCSEG00000017878	srrt	93	53.301	Cynoglossus_semilaevis
ENSOMEG00000006963	-	90	80.052	ENSCVAG00000017344	-	98	79.276	Cyprinodon_variegatus
ENSOMEG00000006963	-	94	59.164	ENSCVAG00000019848	srrt	93	59.129	Cyprinodon_variegatus
ENSOMEG00000006963	-	95	56.747	ENSDARG00000017762	srrt	92	57.041	Danio_rerio
ENSOMEG00000006963	-	53	64.544	ENSDNOG00000003851	SRRT	93	56.569	Dasypus_novemcinctus
ENSOMEG00000006963	-	96	56.009	ENSDORG00000005584	Srrt	89	61.194	Dipodomys_ordii
ENSOMEG00000006963	-	95	45.230	FBgn0033062	Ars2	67	49.893	Drosophila_melanogaster
ENSOMEG00000006963	-	75	62.213	ENSETEG00000016175	SRRT	63	63.529	Echinops_telfairi
ENSOMEG00000006963	-	78	50.150	ENSEBUG00000008517	-	82	59.236	Eptatretus_burgeri
ENSOMEG00000006963	-	96	56.272	ENSEASG00005016956	SRRT	93	55.786	Equus_asinus_asinus
ENSOMEG00000006963	-	96	56.272	ENSECAG00000012292	SRRT	93	55.786	Equus_caballus
ENSOMEG00000006963	-	79	63.095	ENSEEUG00000009117	SRRT	70	60.000	Erinaceus_europaeus
ENSOMEG00000006963	-	93	67.148	ENSELUG00000021216	-	98	67.279	Esox_lucius
ENSOMEG00000006963	-	95	58.514	ENSELUG00000006651	srrt	92	57.326	Esox_lucius
ENSOMEG00000006963	-	96	56.537	ENSFCAG00000006855	SRRT	93	56.204	Felis_catus
ENSOMEG00000006963	-	53	62.309	ENSFDAG00000021347	SRRT	92	55.501	Fukomys_damarensis
ENSOMEG00000006963	-	77	67.079	ENSFHEG00000002756	srrt	87	67.734	Fundulus_heteroclitus
ENSOMEG00000006963	-	55	77.378	ENSFHEG00000004105	-	95	76.395	Fundulus_heteroclitus
ENSOMEG00000006963	-	95	55.817	ENSGMOG00000018619	srrt	92	54.745	Gadus_morhua
ENSOMEG00000006963	-	98	75.795	ENSGAFG00000020383	-	98	75.917	Gambusia_affinis
ENSOMEG00000006963	-	53	67.396	ENSGAFG00000005423	srrt	93	58.617	Gambusia_affinis
ENSOMEG00000006963	-	95	57.728	ENSGACG00000020387	srrt	92	57.041	Gasterosteus_aculeatus
ENSOMEG00000006963	-	93	70.723	ENSGACG00000001100	-	98	71.068	Gasterosteus_aculeatus
ENSOMEG00000006963	-	53	64.544	ENSGGOG00000001508	SRRT	93	56.479	Gorilla_gorilla
ENSOMEG00000006963	-	53	66.812	ENSHBUG00000002942	srrt	89	58.202	Haplochromis_burtoni
ENSOMEG00000006963	-	96	56.624	ENSHGLG00000008344	Srrt	93	56.448	Heterocephalus_glaber_female
ENSOMEG00000006963	-	96	56.789	ENSHGLG00100018857	Srrt	93	56.916	Heterocephalus_glaber_male
ENSOMEG00000006963	-	93	72.657	ENSHCOG00000008904	-	97	73.227	Hippocampus_comes
ENSOMEG00000006963	-	98	58.502	ENSHCOG00000005403	srrt	92	57.915	Hippocampus_comes
ENSOMEG00000006963	-	93	56.024	ENSIPUG00000021150	srrt	93	56.401	Ictalurus_punctatus
ENSOMEG00000006963	-	53	64.530	ENSSTOG00000013776	SRRT	93	56.136	Ictidomys_tridecemlineatus
ENSOMEG00000006963	-	96	57.245	ENSJJAG00000010446	Srrt	89	60.897	Jaculus_jaculus
ENSOMEG00000006963	-	94	59.255	ENSKMAG00000013599	srrt	92	59.473	Kryptolebias_marmoratus
ENSOMEG00000006963	-	93	76.876	ENSKMAG00000008468	-	98	77.843	Kryptolebias_marmoratus
ENSOMEG00000006963	-	96	59.592	ENSLBEG00000016308	srrt	92	58.612	Labrus_bergylta
ENSOMEG00000006963	-	65	71.358	ENSLBEG00000028983	-	97	71.176	Labrus_bergylta
ENSOMEG00000006963	-	94	48.234	ENSLACG00000001089	SRRT	92	48.415	Latimeria_chalumnae
ENSOMEG00000006963	-	53	57.428	ENSLOCG00000013658	srrt	52	57.456	Lepisosteus_oculatus
ENSOMEG00000006963	-	96	56.959	ENSLAFG00000007725	SRRT	93	57.005	Loxodonta_africana
ENSOMEG00000006963	-	53	64.530	ENSMFAG00000033745	SRRT	97	55.730	Macaca_fascicularis
ENSOMEG00000006963	-	96	55.208	ENSMMUG00000021255	SRRT	93	56.448	Macaca_mulatta
ENSOMEG00000006963	-	53	64.544	ENSMNEG00000041864	SRRT	93	56.760	Macaca_nemestrina
ENSOMEG00000006963	-	53	64.530	ENSMLEG00000029479	SRRT	95	55.730	Mandrillus_leucophaeus
ENSOMEG00000006963	-	98	79.429	ENSMAMG00000010681	-	98	79.786	Mastacembelus_armatus
ENSOMEG00000006963	-	53	67.249	ENSMAMG00000014311	srrt	93	58.525	Mastacembelus_armatus
ENSOMEG00000006963	-	53	66.812	ENSMZEG00005016135	srrt	89	58.202	Maylandia_zebra
ENSOMEG00000006963	-	93	78.175	ENSMZEG00005028002	-	98	79.294	Maylandia_zebra
ENSOMEG00000006963	-	96	55.168	ENSMAUG00000011386	Srrt	93	56.715	Mesocricetus_auratus
ENSOMEG00000006963	-	53	64.331	ENSMICG00000009471	SRRT	95	55.730	Microcebus_murinus
ENSOMEG00000006963	-	96	56.776	ENSMOCG00000001971	Srrt	89	60.593	Microtus_ochrogaster
ENSOMEG00000006963	-	95	59.492	ENSMMOG00000016399	srrt	92	59.524	Mola_mola
ENSOMEG00000006963	-	83	74.619	ENSMMOG00000011137	-	88	74.896	Mola_mola
ENSOMEG00000006963	-	53	61.603	ENSMODG00000004862	SRRT	89	62.447	Monodelphis_domestica
ENSOMEG00000006963	-	88	55.371	ENSMALG00000018604	srrt	96	54.392	Monopterus_albus
ENSOMEG00000006963	-	70	56.515	ENSMALG00000005567	-	100	55.882	Monopterus_albus
ENSOMEG00000006963	-	96	57.788	MGP_CAROLIEiJ_G0027870	Srrt	100	59.273	Mus_caroli
ENSOMEG00000006963	-	96	57.788	ENSMUSG00000037364	Srrt	99	59.273	Mus_musculus
ENSOMEG00000006963	-	96	57.432	MGP_PahariEiJ_G0024456	Srrt	100	59.273	Mus_pahari
ENSOMEG00000006963	-	96	57.788	MGP_SPRETEiJ_G0028875	Srrt	100	59.273	Mus_spretus
ENSOMEG00000006963	-	96	56.419	ENSMPUG00000015839	SRRT	93	56.083	Mustela_putorius_furo
ENSOMEG00000006963	-	53	63.907	ENSMLUG00000009975	SRRT	93	56.204	Myotis_lucifugus
ENSOMEG00000006963	-	96	56.958	ENSNGAG00000023715	Srrt	100	57.531	Nannospalax_galili
ENSOMEG00000006963	-	53	66.522	ENSNBRG00000019100	srrt	92	58.384	Neolamprologus_brichardi
ENSOMEG00000006963	-	95	51.825	ENSNLEG00000011987	SRRT	97	52.453	Nomascus_leucogenys
ENSOMEG00000006963	-	94	47.602	ENSMEUG00000011941	SRRT	92	46.796	Notamacropus_eugenii
ENSOMEG00000006963	-	63	60.902	ENSOPRG00000002502	-	67	59.848	Ochotona_princeps
ENSOMEG00000006963	-	53	65.510	ENSODEG00000016856	SRRT	89	60.684	Octodon_degus
ENSOMEG00000006963	-	98	78.996	ENSONIG00000016080	-	98	78.763	Oreochromis_niloticus
ENSOMEG00000006963	-	53	66.812	ENSONIG00000004242	srrt	93	55.609	Oreochromis_niloticus
ENSOMEG00000006963	-	96	56.876	ENSORLG00000008120	srrt	93	57.160	Oryzias_latipes
ENSOMEG00000006963	-	96	57.429	ENSORLG00020003058	srrt	93	56.916	Oryzias_latipes_hni
ENSOMEG00000006963	-	96	58.019	ENSORLG00015008062	srrt	93	57.160	Oryzias_latipes_hsok
ENSOMEG00000006963	-	53	64.331	ENSOGAG00000017242	SRRT	93	56.083	Otolemur_garnettii
ENSOMEG00000006963	-	53	64.103	ENSOARG00000015645	SRRT	93	55.990	Ovis_aries
ENSOMEG00000006963	-	53	64.530	ENSPPAG00000041090	SRRT	93	56.235	Pan_paniscus
ENSOMEG00000006963	-	96	56.398	ENSPPRG00000009557	SRRT	93	56.005	Panthera_pardus
ENSOMEG00000006963	-	96	56.537	ENSPTIG00000014355	SRRT	93	56.204	Panthera_tigris_altaica
ENSOMEG00000006963	-	53	64.530	ENSPTRG00000019511	SRRT	98	54.337	Pan_troglodytes
ENSOMEG00000006963	-	53	63.466	ENSPANG00000020763	SRRT	94	55.730	Papio_anubis
ENSOMEG00000006963	-	94	58.204	ENSPKIG00000022212	-	93	56.444	Paramormyrops_kingsleyae
ENSOMEG00000006963	-	96	57.995	ENSPKIG00000005434	srrt	92	57.125	Paramormyrops_kingsleyae
ENSOMEG00000006963	-	53	64.270	ENSPSIG00000016311	SRRT	93	54.589	Pelodiscus_sinensis
ENSOMEG00000006963	-	96	58.646	ENSPMGG00000002841	srrt	92	59.125	Periophthalmus_magnuspinnatus
ENSOMEG00000006963	-	53	64.859	ENSPEMG00000010834	Srrt	89	60.256	Peromyscus_maniculatus_bairdii
ENSOMEG00000006963	-	96	52.019	ENSPMAG00000009614	-	93	51.911	Petromyzon_marinus
ENSOMEG00000006963	-	96	53.494	ENSPCIG00000000816	SRRT	93	54.458	Phascolarctos_cinereus
ENSOMEG00000006963	-	53	67.615	ENSPFOG00000005704	srrt	93	59.466	Poecilia_formosa
ENSOMEG00000006963	-	98	76.313	ENSPFOG00000016554	-	98	76.435	Poecilia_formosa
ENSOMEG00000006963	-	98	76.220	ENSPLAG00000004526	-	98	76.341	Poecilia_latipinna
ENSOMEG00000006963	-	94	57.583	ENSPLAG00000021992	srrt	93	57.863	Poecilia_latipinna
ENSOMEG00000006963	-	95	75.628	ENSPMEG00000001520	-	97	75.754	Poecilia_mexicana
ENSOMEG00000006963	-	78	66.739	ENSPMEG00000001182	srrt	93	59.295	Poecilia_mexicana
ENSOMEG00000006963	-	94	59.064	ENSPREG00000022308	srrt	93	59.466	Poecilia_reticulata
ENSOMEG00000006963	-	53	62.422	ENSPCAG00000001621	SRRT	93	55.193	Procavia_capensis
ENSOMEG00000006963	-	53	64.331	ENSPCOG00000025751	SRRT	93	56.326	Propithecus_coquereli
ENSOMEG00000006963	-	71	56.476	ENSPVAG00000000834	SRRT	100	49.782	Pteropus_vampyrus
ENSOMEG00000006963	-	53	66.812	ENSPNYG00000018710	srrt	93	58.202	Pundamilia_nyererei
ENSOMEG00000006963	-	74	61.392	ENSPNAG00000010629	srrt	91	63.433	Pygocentrus_nattereri
ENSOMEG00000006963	-	53	54.506	ENSRNOG00000048277	AABR07035787.1	92	54.390	Rattus_norvegicus
ENSOMEG00000006963	-	53	64.544	ENSRBIG00000035718	SRRT	94	55.730	Rhinopithecus_bieti
ENSOMEG00000006963	-	53	64.544	ENSRROG00000030622	SRRT	95	55.730	Rhinopithecus_roxellana
ENSOMEG00000006963	-	53	64.544	ENSSBOG00000033570	SRRT	94	56.357	Saimiri_boliviensis_boliviensis
ENSOMEG00000006963	-	71	51.813	ENSSHAG00000007349	-	100	53.096	Sarcophilus_harrisii
ENSOMEG00000006963	-	94	58.747	ENSSFOG00015017293	srrt	92	58.873	Scleropages_formosus
ENSOMEG00000006963	-	53	81.128	ENSSMAG00000018195	-	97	72.619	Scophthalmus_maximus
ENSOMEG00000006963	-	94	59.390	ENSSMAG00000015342	srrt	92	59.153	Scophthalmus_maximus
ENSOMEG00000006963	-	80	67.896	ENSSDUG00000012049	srrt	92	58.924	Seriola_dumerili
ENSOMEG00000006963	-	55	70.042	ENSSDUG00000002051	-	95	70.085	Seriola_dumerili
ENSOMEG00000006963	-	80	68.860	ENSSLDG00000017477	srrt	79	68.571	Seriola_lalandi_dorsalis
ENSOMEG00000006963	-	86	79.278	ENSSPAG00000018943	-	97	81.067	Stegastes_partitus
ENSOMEG00000006963	-	53	66.811	ENSSPAG00000005665	srrt	91	58.625	Stegastes_partitus
ENSOMEG00000006963	-	51	64.143	ENSSSCG00000024789	SRRT	98	55.487	Sus_scrofa
ENSOMEG00000006963	-	96	56.098	ENSTRUG00000016075	srrt	93	56.667	Takifugu_rubripes
ENSOMEG00000006963	-	90	76.882	ENSTRUG00000000023	-	96	77.764	Takifugu_rubripes
ENSOMEG00000006963	-	74	54.009	ENSTNIG00000011779	srrt	100	55.573	Tetraodon_nigroviridis
ENSOMEG00000006963	-	93	71.166	ENSTNIG00000003111	-	93	71.728	Tetraodon_nigroviridis
ENSOMEG00000006963	-	53	64.544	ENSTTRG00000011104	SRRT	93	56.265	Tursiops_truncatus
ENSOMEG00000006963	-	95	56.383	ENSUAMG00000027997	SRRT	95	56.083	Ursus_americanus
ENSOMEG00000006963	-	96	56.419	ENSUMAG00000011295	SRRT	93	56.083	Ursus_maritimus
ENSOMEG00000006963	-	96	56.302	ENSVVUG00000023572	SRRT	93	55.865	Vulpes_vulpes
ENSOMEG00000006963	-	96	49.529	ENSXETG00000025124	srrt	92	48.481	Xenopus_tropicalis
ENSOMEG00000006963	-	55	67.249	ENSXCOG00000013105	-	92	68.080	Xiphophorus_couchianus
ENSOMEG00000006963	-	96	57.665	ENSXMAG00000007627	srrt	93	58.263	Xiphophorus_maculatus
ENSOMEG00000006963	-	98	77.601	ENSXMAG00000002090	-	98	76.867	Xiphophorus_maculatus