EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000007083 (Gene tree)
Gene ID: 112142723
Gene Symbol: npm1a
Alias: -
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 7795 bases
Position: chrNVQA01000005.1:5915050-5922844
Accession: 112142723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000006043	Nucleoplasmin	PF03066.15	9.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000006467	-	2916	-	ENSOMEP00000006043	293 (aa)	XP_024122030	UPI000CF7F887

Gene Model

Click here to download ENSOMEG00000007083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000007083's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000007083	npm1a	94	35.315	ENSOMEG00000003414	npm1b	94	35.971
ENSOMEG00000007083	npm1a	51	39.744	ENSOMEG00000002666	npm3	96	38.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000007083	npm1a	100	72.425	ENSAPOG00000002813	npm1a	100	73.422	Acanthochromis_polyacanthus
ENSOMEG00000007083	npm1a	94	70.863	ENSACIG00000014201	npm1a	100	72.438	Amphilophus_citrinellus
ENSOMEG00000007083	npm1a	89	66.284	ENSAOCG00000004978	npm1a	100	65.134	Amphiprion_ocellaris
ENSOMEG00000007083	npm1a	100	73.826	ENSAPEG00000008594	npm1a	100	73.826	Amphiprion_percula
ENSOMEG00000007083	npm1a	99	75.410	ENSATEG00000008885	npm1a	99	75.410	Anabas_testudineus
ENSOMEG00000007083	npm1a	97	66.202	ENSACLG00000008376	npm1a	96	66.549	Astatotilapia_calliptera
ENSOMEG00000007083	npm1a	98	53.125	ENSAMXG00000010155	npm1a	99	54.639	Astyanax_mexicanus
ENSOMEG00000007083	npm1a	100	57.679	ENSCSEG00000011165	npm1a	99	76.582	Cynoglossus_semilaevis
ENSOMEG00000007083	npm1a	100	69.128	ENSCVAG00000008960	npm1a	100	69.463	Cyprinodon_variegatus
ENSOMEG00000007083	npm1a	98	62.369	ENSDARG00000014329	npm1a	95	69.481	Danio_rerio
ENSOMEG00000007083	npm1a	97	33.846	ENSEBUG00000012753	npm1a	93	33.538	Eptatretus_burgeri
ENSOMEG00000007083	npm1a	100	66.216	ENSELUG00000013705	npm1a	100	66.216	Esox_lucius
ENSOMEG00000007083	npm1a	100	73.841	ENSFHEG00000012496	npm1a	100	73.510	Fundulus_heteroclitus
ENSOMEG00000007083	npm1a	100	66.667	ENSGAFG00000013059	npm1a	100	66.667	Gambusia_affinis
ENSOMEG00000007083	npm1a	99	65.292	ENSGACG00000020319	npm1a	99	65.636	Gasterosteus_aculeatus
ENSOMEG00000007083	npm1a	99	66.139	ENSHBUG00000000776	npm1a	100	66.456	Haplochromis_burtoni
ENSOMEG00000007083	npm1a	100	52.649	ENSHCOG00000001059	npm1a	98	53.356	Hippocampus_comes
ENSOMEG00000007083	npm1a	98	58.923	ENSIPUG00000019452	npm1	99	58.923	Ictalurus_punctatus
ENSOMEG00000007083	npm1a	100	75.932	ENSKMAG00000010709	npm1a	100	75.593	Kryptolebias_marmoratus
ENSOMEG00000007083	npm1a	100	70.903	ENSLBEG00000008793	npm1a	99	71.864	Labrus_bergylta
ENSOMEG00000007083	npm1a	85	56.716	ENSLOCG00000009683	npm1a	100	55.970	Lepisosteus_oculatus
ENSOMEG00000007083	npm1a	100	73.649	ENSMAMG00000009344	npm1a	83	73.311	Mastacembelus_armatus
ENSOMEG00000007083	npm1a	99	69.427	ENSMZEG00005013717	npm1a	100	69.427	Maylandia_zebra
ENSOMEG00000007083	npm1a	95	72.401	ENSMMOG00000007980	npm1a	100	70.968	Mola_mola
ENSOMEG00000007083	npm1a	100	71.761	ENSMALG00000001146	npm1a	99	73.737	Monopterus_albus
ENSOMEG00000007083	npm1a	99	63.091	ENSNBRG00000013172	npm1a	100	63.722	Neolamprologus_brichardi
ENSOMEG00000007083	npm1a	99	65.781	ENSONIG00000001860	npm1a	99	66.667	Oreochromis_niloticus
ENSOMEG00000007083	npm1a	100	87.713	ENSORLG00000010179	npm1a	100	87.713	Oryzias_latipes
ENSOMEG00000007083	npm1a	100	86.689	ENSORLG00020020817	npm1a	100	87.372	Oryzias_latipes_hni
ENSOMEG00000007083	npm1a	100	88.055	ENSORLG00015003439	npm1a	100	88.055	Oryzias_latipes_hsok
ENSOMEG00000007083	npm1a	100	54.125	ENSPKIG00000023943	npm1a	100	54.125	Paramormyrops_kingsleyae
ENSOMEG00000007083	npm1a	100	54.181	ENSPMGG00000011716	npm1a	100	54.882	Periophthalmus_magnuspinnatus
ENSOMEG00000007083	npm1a	100	66.777	ENSPFOG00000019173	npm1a	100	68.771	Poecilia_formosa
ENSOMEG00000007083	npm1a	100	68.977	ENSPLAG00000001093	npm1a	100	68.977	Poecilia_latipinna
ENSOMEG00000007083	npm1a	100	66.777	ENSPMEG00000012523	npm1a	100	68.771	Poecilia_mexicana
ENSOMEG00000007083	npm1a	100	70.333	ENSPREG00000001647	npm1a	100	70.667	Poecilia_reticulata
ENSOMEG00000007083	npm1a	99	69.453	ENSPNYG00000019321	npm1a	100	70.096	Pundamilia_nyererei
ENSOMEG00000007083	npm1a	98	57.432	ENSPNAG00000026891	npm1a	99	58.784	Pygocentrus_nattereri
ENSOMEG00000007083	npm1a	100	59.060	ENSSFOG00015007074	npm1a	100	59.060	Scleropages_formosus
ENSOMEG00000007083	npm1a	100	74.747	ENSSMAG00000019090	npm1a	100	75.084	Scophthalmus_maximus
ENSOMEG00000007083	npm1a	100	75.168	ENSSDUG00000015609	npm1a	100	75.168	Seriola_dumerili
ENSOMEG00000007083	npm1a	100	74.747	ENSSLDG00000017849	npm1a	100	75.084	Seriola_lalandi_dorsalis
ENSOMEG00000007083	npm1a	100	54.608	ENSSPAG00000021660	npm1a	94	53.448	Stegastes_partitus
ENSOMEG00000007083	npm1a	100	71.854	ENSTRUG00000024003	npm1a	100	71.854	Takifugu_rubripes
ENSOMEG00000007083	npm1a	100	67.797	ENSTNIG00000010773	npm1a	100	67.797	Tetraodon_nigroviridis
ENSOMEG00000007083	npm1a	99	62.585	ENSXCOG00000005958	npm1a	100	67.719	Xiphophorus_couchianus
ENSOMEG00000007083	npm1a	100	71.053	ENSXMAG00000000396	npm1a	100	71.053	Xiphophorus_maculatus