EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000007486 (Gene tree)
Gene ID
112146092
Gene Symbol
smarca4a
Alias
-
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
19364 bases
Position
chrNVQA01000010.1:3952240-3971603
Accession
112146092
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000025946ResIIIPF04851.158.7e-0911
ENSOMEP00000025946BRKPF07533.166.5e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000005835-5611XM_024271734ENSOMEP000000259461618 (aa)XP_024127502UPI000CF83D6C
ENSOMET00000005908-615-ENSOMEP00000006385204 (aa)--
Gene Model
Click here to download ENSOMEG00000007486's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000007486's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000007486smarca4a9784.266ENSOMEG00000016626-9582.870
ENSOMEG00000007486smarca4a9971.975ENSOMEG00000009736-9671.229
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000007486smarca4a10087.118ENSG00000127616SMARCA49995.652Homo_sapiens
ENSOMEG00000007486smarca4a7692.357ENSAPOG00000003509smarca4a9889.515Acanthochromis_polyacanthus
ENSOMEG00000007486smarca4a9584.178ENSAPOG00000004542SMARCA49984.308Acanthochromis_polyacanthus
ENSOMEG00000007486smarca4a10083.020ENSAMEG00000010868SMARCA410082.529Ailuropoda_melanoleuca
ENSOMEG00000007486smarca4a9994.770ENSACIG00000021550smarca4a9894.832Amphilophus_citrinellus
ENSOMEG00000007486smarca4a9584.695ENSACIG00000003035-9785.010Amphilophus_citrinellus
ENSOMEG00000007486smarca4a9486.275ENSAOCG00000009450-9786.536Amphiprion_ocellaris
ENSOMEG00000007486smarca4a8990.728ENSAOCG00000019167smarca4a10089.774Amphiprion_ocellaris
ENSOMEG00000007486smarca4a9981.472ENSAPEG00000023108-9882.969Amphiprion_percula
ENSOMEG00000007486smarca4a8990.797ENSAPEG00000015559smarca4a10089.842Amphiprion_percula
ENSOMEG00000007486smarca4a10093.681ENSATEG00000011524smarca4a10093.804Anabas_testudineus
ENSOMEG00000007486smarca4a9984.845ENSATEG00000001094-9884.281Anabas_testudineus
ENSOMEG00000007486smarca4a9986.914ENSANAG00000036991SMARCA410083.434Aotus_nancymaae
ENSOMEG00000007486smarca4a9584.664ENSACLG00000008638-9884.078Astatotilapia_calliptera
ENSOMEG00000007486smarca4a9993.500ENSACLG00000000163smarca4a9894.416Astatotilapia_calliptera
ENSOMEG00000007486smarca4a9487.435ENSAMXG00000011238-9486.580Astyanax_mexicanus
ENSOMEG00000007486smarca4a9885.642ENSAMXG00000021023smarca4a9985.518Astyanax_mexicanus
ENSOMEG00000007486smarca4a10087.247ENSBTAG00000019220SMARCA49886.738Bos_taurus
ENSOMEG00000007486smarca4a10083.040ENSCJAG00000005936SMARCA410082.785Callithrix_jacchus
ENSOMEG00000007486smarca4a10086.882ENSCAFG00000017584SMARCA410086.561Canis_familiaris
ENSOMEG00000007486smarca4a10086.882ENSCAFG00020024620SMARCA49986.561Canis_lupus_dingo
ENSOMEG00000007486smarca4a10083.405ENSCHIG00000015318SMARCA410082.511Capra_hircus
ENSOMEG00000007486smarca4a10087.423ENSTSYG00000012966SMARCA410086.986Carlito_syrichta
ENSOMEG00000007486smarca4a9481.567ENSCAPG00000015932SMARCA49489.323Cavia_aperea
ENSOMEG00000007486smarca4a10086.943ENSCPOG00000015549SMARCA410086.622Cavia_porcellus
ENSOMEG00000007486smarca4a10083.859ENSCCAG00000031660SMARCA49983.597Cebus_capucinus
ENSOMEG00000007486smarca4a10087.065ENSCATG00000029530SMARCA410086.622Cercocebus_atys
ENSOMEG00000007486smarca4a10087.178ENSCLAG00000011946SMARCA410086.986Chinchilla_lanigera
ENSOMEG00000007486smarca4a10086.561ENSCPBG00000009994SMARCA410086.116Chrysemys_picta_bellii
ENSOMEG00000007486smarca4a10087.004ENSCANG00000036013SMARCA410086.622Colobus_angolensis_palliatus
ENSOMEG00000007486smarca4a10086.760ENSCGRG00001016732Smarca410086.378Cricetulus_griseus_chok1gshd
ENSOMEG00000007486smarca4a10086.760ENSCGRG00000017242Smarca410086.378Cricetulus_griseus_crigri
ENSOMEG00000007486smarca4a9692.743ENSCSEG00000014771smarca4a10092.940Cynoglossus_semilaevis
ENSOMEG00000007486smarca4a9993.625ENSCVAG00000006979smarca4a9993.625Cyprinodon_variegatus
ENSOMEG00000007486smarca4a9984.070ENSCVAG00000003018-9884.194Cyprinodon_variegatus
ENSOMEG00000007486smarca4a10089.412ENSDARG00000077226smarca4a10089.168Danio_rerio
ENSOMEG00000007486smarca4a9283.699ENSDARG00000104339SMARCA49484.430Danio_rerio
ENSOMEG00000007486smarca4a10078.543ENSDNOG00000048847SMARCA49090.119Dasypus_novemcinctus
ENSOMEG00000007486smarca4a8481.390ENSDORG00000002544Smarca49181.277Dipodomys_ordii
ENSOMEG00000007486smarca4a9476.422ENSETEG00000013361SMARCA49475.432Echinops_telfairi
ENSOMEG00000007486smarca4a10086.882ENSEASG00005006167SMARCA410084.871Equus_asinus_asinus
ENSOMEG00000007486smarca4a10086.943ENSECAG00000008334SMARCA410086.561Equus_caballus
ENSOMEG00000007486smarca4a10089.362ENSELUG00000010247smarca4a10088.375Esox_lucius
ENSOMEG00000007486smarca4a9979.028ENSELUG00000023232-9882.181Esox_lucius
ENSOMEG00000007486smarca4a10086.784ENSFCAG00000004894SMARCA410086.402Felis_catus
ENSOMEG00000007486smarca4a7391.092ENSFALG00000004208SMARCA49782.801Ficedula_albicollis
ENSOMEG00000007486smarca4a9286.959ENSFDAG00000012237SMARCA49786.609Fukomys_damarensis
ENSOMEG00000007486smarca4a10084.680ENSFHEG00000007902-9884.505Fundulus_heteroclitus
ENSOMEG00000007486smarca4a9692.590ENSFHEG00000010182smarca4a10092.853Fundulus_heteroclitus
ENSOMEG00000007486smarca4a8993.220ENSGMOG00000002649smarca4a9487.202Gadus_morhua
ENSOMEG00000007486smarca4a9080.997ENSGMOG00000005756-8779.432Gadus_morhua
ENSOMEG00000007486smarca4a7386.190ENSGALG00000047145SMARCA410085.833Gallus_gallus
ENSOMEG00000007486smarca4a9191.515ENSGAFG00000014900smarca4a10092.525Gambusia_affinis
ENSOMEG00000007486smarca4a9981.581ENSGAFG00000008827-9881.773Gambusia_affinis
ENSOMEG00000007486smarca4a10080.225ENSGACG00000016033-10080.084Gasterosteus_aculeatus
ENSOMEG00000007486smarca4a9892.785ENSGACG00000006691smarca4a10092.402Gasterosteus_aculeatus
ENSOMEG00000007486smarca4a10086.781ENSGAGG00000016757SMARCA410086.336Gopherus_agassizii
ENSOMEG00000007486smarca4a10087.065ENSGGOG00000009882SMARCA410086.622Gorilla_gorilla
ENSOMEG00000007486smarca4a10094.298ENSHBUG00000021172smarca4a10094.298Haplochromis_burtoni
ENSOMEG00000007486smarca4a10084.657ENSHBUG00000005447-9984.217Haplochromis_burtoni
ENSOMEG00000007486smarca4a10086.330ENSHGLG00000010519SMARCA410086.010Heterocephalus_glaber_female
ENSOMEG00000007486smarca4a10085.984ENSHGLG00100013774SMARCA410085.601Heterocephalus_glaber_male
ENSOMEG00000007486smarca4a9593.088ENSHCOG00000009510smarca4a9693.092Hippocampus_comes
ENSOMEG00000007486smarca4a9884.969ENSIPUG00000016346-9784.375Ictalurus_punctatus
ENSOMEG00000007486smarca4a10088.943ENSIPUG00000006107smarca4a10088.964Ictalurus_punctatus
ENSOMEG00000007486smarca4a10086.821ENSSTOG00000007939SMARCA410086.439Ictidomys_tridecemlineatus
ENSOMEG00000007486smarca4a10085.167ENSJJAG00000012877Smarca410084.251Jaculus_jaculus
ENSOMEG00000007486smarca4a10093.708ENSKMAG00000011931smarca4a10093.769Kryptolebias_marmoratus
ENSOMEG00000007486smarca4a9586.959ENSKMAG00000019518-9886.546Kryptolebias_marmoratus
ENSOMEG00000007486smarca4a9589.729ENSLBEG00000017383smarca4a9788.989Labrus_bergylta
ENSOMEG00000007486smarca4a9981.639ENSLBEG00000020655-9881.308Labrus_bergylta
ENSOMEG00000007486smarca4a5281.014ENSLACG00000015309SMARCA410080.874Latimeria_chalumnae
ENSOMEG00000007486smarca4a10085.890ENSLOCG00000007820smarca4a9985.201Lepisosteus_oculatus
ENSOMEG00000007486smarca4a10086.845ENSLAFG00000001433SMARCA410086.463Loxodonta_africana
ENSOMEG00000007486smarca4a10087.065ENSMFAG00000032146SMARCA49986.622Macaca_fascicularis
ENSOMEG00000007486smarca4a10087.065ENSMMUG00000012042SMARCA49791.027Macaca_mulatta
ENSOMEG00000007486smarca4a10087.049ENSMNEG00000028512SMARCA410086.606Macaca_nemestrina
ENSOMEG00000007486smarca4a10087.065ENSMLEG00000034976SMARCA410086.463Mandrillus_leucophaeus
ENSOMEG00000007486smarca4a9586.520ENSMAMG00000002841-9886.844Mastacembelus_armatus
ENSOMEG00000007486smarca4a10094.349ENSMAMG00000009256smarca4a10094.472Mastacembelus_armatus
ENSOMEG00000007486smarca4a10094.301ENSMZEG00005003889smarca4a10094.301Maylandia_zebra
ENSOMEG00000007486smarca4a9585.253ENSMZEG00005023861-9884.791Maylandia_zebra
ENSOMEG00000007486smarca4a10086.480ENSMAUG00000020731Smarca410086.098Mesocricetus_auratus
ENSOMEG00000007486smarca4a10086.845ENSMICG00000009806SMARCA410086.463Microcebus_murinus
ENSOMEG00000007486smarca4a10086.602ENSMOCG00000022209Smarca410086.220Microtus_ochrogaster
ENSOMEG00000007486smarca4a9591.656ENSMMOG00000007571smarca4a9891.203Mola_mola
ENSOMEG00000007486smarca4a9982.090ENSMMOG00000008466-9881.648Mola_mola
ENSOMEG00000007486smarca4a10085.851ENSMODG00000006287SMARCA410084.694Monodelphis_domestica
ENSOMEG00000007486smarca4a9693.071ENSMALG00000003388smarca4a10092.949Monopterus_albus
ENSOMEG00000007486smarca4a8983.586ENSMALG00000021534-9982.967Monopterus_albus
ENSOMEG00000007486smarca4a10086.874MGP_CAROLIEiJ_G0031879Smarca410086.491Mus_caroli
ENSOMEG00000007486smarca4a10086.874ENSMUSG00000032187Smarca410086.491Mus_musculus
ENSOMEG00000007486smarca4a10087.316MGP_PahariEiJ_G0014745Smarca410086.871Mus_pahari
ENSOMEG00000007486smarca4a10086.874MGP_SPRETEiJ_G0033003Smarca410086.491Mus_spretus
ENSOMEG00000007486smarca4a10086.882ENSMPUG00000005711SMARCA410086.500Mustela_putorius_furo
ENSOMEG00000007486smarca4a10087.309ENSMLUG00000004491-10086.369Myotis_lucifugus
ENSOMEG00000007486smarca4a10087.271ENSNGAG00000021852Smarca410086.650Nannospalax_galili
ENSOMEG00000007486smarca4a9590.815ENSNBRG00000011457smarca4a9690.039Neolamprologus_brichardi
ENSOMEG00000007486smarca4a8984.287ENSNBRG00000018865-9984.207Neolamprologus_brichardi
ENSOMEG00000007486smarca4a9584.615ENSNLEG00000012389SMARCA49484.106Nomascus_leucogenys
ENSOMEG00000007486smarca4a8093.103ENSOPRG00000000885-7893.103Ochotona_princeps
ENSOMEG00000007486smarca4a10084.508ENSODEG00000017127SMARCA410083.790Octodon_degus
ENSOMEG00000007486smarca4a10084.838ENSONIG00000018040-10084.398Oreochromis_niloticus
ENSOMEG00000007486smarca4a10094.359ENSONIG00000008196smarca4a10094.359Oreochromis_niloticus
ENSOMEG00000007486smarca4a9981.180ENSOCUG00000001787SMARCA49880.730Oryctolagus_cuniculus
ENSOMEG00000007486smarca4a10097.347ENSORLG00000015452smarca4a10097.347Oryzias_latipes
ENSOMEG00000007486smarca4a9584.111ENSORLG00000003955-9881.624Oryzias_latipes
ENSOMEG00000007486smarca4a9584.121ENSORLG00020009728-9881.637Oryzias_latipes_hni
ENSOMEG00000007486smarca4a10097.347ENSORLG00020004611smarca4a10097.347Oryzias_latipes_hni
ENSOMEG00000007486smarca4a10097.224ENSORLG00015016560smarca4a10097.224Oryzias_latipes_hsok
ENSOMEG00000007486smarca4a9984.114ENSORLG00015007739-9581.784Oryzias_latipes_hsok
ENSOMEG00000007486smarca4a8985.705ENSOGAG00000016148SMARCA410085.003Otolemur_garnettii
ENSOMEG00000007486smarca4a10086.634ENSOARG00000017454SMARCA49886.424Ovis_aries
ENSOMEG00000007486smarca4a10087.065ENSPPAG00000043191SMARCA410086.622Pan_paniscus
ENSOMEG00000007486smarca4a10086.784ENSPPRG00000000064SMARCA410086.402Panthera_pardus
ENSOMEG00000007486smarca4a7986.048ENSPTIG00000017447SMARCA410080.622Panthera_tigris_altaica
ENSOMEG00000007486smarca4a10087.065ENSPTRG00000010488SMARCA410086.622Pan_troglodytes
ENSOMEG00000007486smarca4a10087.172ENSPANG00000011042SMARCA49986.728Papio_anubis
ENSOMEG00000007486smarca4a10088.855ENSPKIG00000007770SMARCA410089.393Paramormyrops_kingsleyae
ENSOMEG00000007486smarca4a10086.277ENSPKIG00000010087-10085.135Paramormyrops_kingsleyae
ENSOMEG00000007486smarca4a10081.257ENSPSIG00000005547SMARCA410080.686Pelodiscus_sinensis
ENSOMEG00000007486smarca4a10086.663ENSPEMG00000020389Smarca410086.280Peromyscus_maniculatus_bairdii
ENSOMEG00000007486smarca4a10087.469ENSPCIG00000017138SMARCA410086.842Phascolarctos_cinereus
ENSOMEG00000007486smarca4a10091.320ENSPFOG00000007892smarca4a10092.543Poecilia_formosa
ENSOMEG00000007486smarca4a8888.483ENSPFOG00000012930-9982.124Poecilia_formosa
ENSOMEG00000007486smarca4a10091.381ENSPLAG00000014294smarca4a10092.604Poecilia_latipinna
ENSOMEG00000007486smarca4a9985.919ENSPLAG00000018616-9885.430Poecilia_latipinna
ENSOMEG00000007486smarca4a9983.769ENSPMEG00000008929-9884.197Poecilia_mexicana
ENSOMEG00000007486smarca4a9591.897ENSPMEG00000003725smarca4a9692.917Poecilia_mexicana
ENSOMEG00000007486smarca4a9980.762ENSPREG00000014823-9881.398Poecilia_reticulata
ENSOMEG00000007486smarca4a10091.286ENSPREG00000014608smarca4a10092.078Poecilia_reticulata
ENSOMEG00000007486smarca4a10085.048ENSPPYG00000009568SMARCA410084.371Pongo_abelii
ENSOMEG00000007486smarca4a7988.079ENSPCAG00000014054SMARCA47788.079Procavia_capensis
ENSOMEG00000007486smarca4a10087.065ENSPCOG00000023011SMARCA410086.524Propithecus_coquereli
ENSOMEG00000007486smarca4a9581.769ENSPVAG00000007787SMARCA49680.399Pteropus_vampyrus
ENSOMEG00000007486smarca4a9584.176ENSPNYG00000023995-9884.555Pundamilia_nyererei
ENSOMEG00000007486smarca4a9794.476ENSPNYG00000000717smarca4a9894.476Pundamilia_nyererei
ENSOMEG00000007486smarca4a9587.355ENSPNAG00000006636-9386.465Pygocentrus_nattereri
ENSOMEG00000007486smarca4a9883.985ENSPNAG00000024136smarca4a9885.090Pygocentrus_nattereri
ENSOMEG00000007486smarca4a10086.874ENSRNOG00000009271Smarca410086.491Rattus_norvegicus
ENSOMEG00000007486smarca4a10087.004ENSRBIG00000038696SMARCA49986.561Rhinopithecus_bieti
ENSOMEG00000007486smarca4a10087.004ENSRROG00000045509SMARCA410086.561Rhinopithecus_roxellana
ENSOMEG00000007486smarca4a10086.813ENSSBOG00000026896SMARCA49789.139Saimiri_boliviensis_boliviensis
ENSOMEG00000007486smarca4a10087.592ENSSHAG00000001642SMARCA410086.965Sarcophilus_harrisii
ENSOMEG00000007486smarca4a9990.006ENSSFOG00015013823smarca49989.882Scleropages_formosus
ENSOMEG00000007486smarca4a9684.753ENSSFOG00015009921-9490.625Scleropages_formosus
ENSOMEG00000007486smarca4a10082.254ENSSMAG00000014082-9981.944Scophthalmus_maximus
ENSOMEG00000007486smarca4a10092.883ENSSMAG00000003200smarca4a10092.701Scophthalmus_maximus
ENSOMEG00000007486smarca4a10089.441ENSSDUG00000017298smarca4a10089.148Seriola_dumerili
ENSOMEG00000007486smarca4a9986.364ENSSDUG00000005388-9882.827Seriola_dumerili
ENSOMEG00000007486smarca4a9586.723ENSSLDG00000023663-9786.693Seriola_lalandi_dorsalis
ENSOMEG00000007486smarca4a10093.974ENSSLDG00000024486smarca4a10093.609Seriola_lalandi_dorsalis
ENSOMEG00000007486smarca4a6296.894ENSSARG00000013477SMARCA48396.894Sorex_araneus
ENSOMEG00000007486smarca4a9583.749ENSSPUG00000004558SMARCA49883.216Sphenodon_punctatus
ENSOMEG00000007486smarca4a10093.670ENSSPAG00000004248smarca4a10093.244Stegastes_partitus
ENSOMEG00000007486smarca4a10083.789ENSSPAG00000012533-9782.294Stegastes_partitus
ENSOMEG00000007486smarca4a10086.845ENSSSCG00000013629SMARCA410086.463Sus_scrofa
ENSOMEG00000007486smarca4a5284.104ENSTGUG00000015488-9883.971Taeniopygia_guttata
ENSOMEG00000007486smarca4a9583.715ENSTRUG00000001378SMARCA49883.620Takifugu_rubripes
ENSOMEG00000007486smarca4a8987.046ENSTRUG00000004885smarca4a10085.548Takifugu_rubripes
ENSOMEG00000007486smarca4a7392.171ENSTNIG00000004859-10092.171Tetraodon_nigroviridis
ENSOMEG00000007486smarca4a10083.027ENSTNIG00000004536SMARCA410083.374Tetraodon_nigroviridis
ENSOMEG00000007486smarca4a10083.892ENSTTRG00000009519SMARCA410083.034Tursiops_truncatus
ENSOMEG00000007486smarca4a10086.943ENSUAMG00000014661SMARCA410086.561Ursus_americanus
ENSOMEG00000007486smarca4a9583.419ENSUMAG00000022005SMARCA49989.895Ursus_maritimus
ENSOMEG00000007486smarca4a10086.882ENSVVUG00000017820SMARCA49786.561Vulpes_vulpes
ENSOMEG00000007486smarca4a10082.611ENSXETG00000009355smarca410081.461Xenopus_tropicalis
ENSOMEG00000007486smarca4a9983.385ENSXCOG00000013494-9882.636Xiphophorus_couchianus
ENSOMEG00000007486smarca4a9982.959ENSXMAG00000007030-9883.770Xiphophorus_maculatus
ENSOMEG00000007486smarca4a10091.544ENSXMAG00000006321smarca4a10092.218Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us