EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000007677 (Gene tree)
Gene ID
112162635
Gene Symbol
-
Alias
-
Full Name
RNA-binding motif%2C single-stranded-interacting protein 3-like
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
430485 bases
Position
chrNVQA01000030.1:4504065-4934549
Accession
112162635
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000006569RRM_1PF00076.221.4e-3112
ENSOMEP00000006569RRM_1PF00076.221.4e-3122
ENSOMEP00000006589RRM_1PF00076.222.1e-3112
ENSOMEP00000006589RRM_1PF00076.222.1e-3122
ENSOMEP00000026054RRM_1PF00076.224.6e-3112
ENSOMEP00000026054RRM_1PF00076.224.6e-3122
ENSOMEP00000006637RRM_1PF00076.225.1e-3112
ENSOMEP00000006637RRM_1PF00076.225.1e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000005567-1441-ENSOMEP00000006589382 (aa)--
ENSOMET00000005605-1144-ENSOMEP00000006569345 (aa)--
ENSOMET00000005488-1842-ENSOMEP00000006637507 (aa)XP_024154236UPI000CF83E8F
ENSOMET00000005522-1791-ENSOMEP00000026054490 (aa)--
Gene Model
Click here to download ENSOMEG00000007677's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000007677's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000007677-9574.521ENSOMEG00000021369rbms2a9973.958
ENSOMEG00000007677-6235.000ENSOMEG00000015364si:dkey-205h23.25835.000
ENSOMEG00000007677-5135.519ENSOMEG00000023959elavl35135.519
ENSOMEG00000007677-8671.299ENSOMEG00000002394RBMS19166.667
ENSOMEG00000007677-5936.250ENSOMEG00000002391celf46236.250
ENSOMEG00000007677-5432.632ENSOMEG00000020219pabpc1a5932.632
ENSOMEG00000007677-9981.654ENSOMEG00000014805RBMS39981.654
ENSOMEG00000007677-5436.250ENSOMEG00000019511celf5a5436.250
ENSOMEG00000007677-5336.224ENSOMEG00000015322-8036.000
ENSOMEG00000007677-5433.684ENSOMEG00000014410pabpc46233.010
ENSOMEG00000007677-8574.390ENSOMEG00000016468rbms2b9371.875
ENSOMEG00000007677-6165.238ENSOMEG00000014637-8664.159
ENSOMEG00000007677-8231.611ENSOMEG00000005178ELAVL26438.342
ENSOMEG00000007677-5036.250ENSOMEG00000002381celf15439.474
ENSOMEG00000007677-7730.435ENSOMEG00000009988elavl46036.723
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000007677-9689.617ENSG00000144642RBMS39187.824Homo_sapiens
ENSOMEG00000007677-10098.168ENSAPOG00000003432-9298.168Acanthochromis_polyacanthus
ENSOMEG00000007677-9578.141ENSAPOG00000007266rbms38584.286Acanthochromis_polyacanthus
ENSOMEG00000007677-7583.168ENSAMEG00000005947RBMS39983.168Ailuropoda_melanoleuca
ENSOMEG00000007677-8197.742ENSACIG00000006987-8797.806Amphilophus_citrinellus
ENSOMEG00000007677-9574.590ENSACIG00000021113RBMS39574.863Amphilophus_citrinellus
ENSOMEG00000007677-10098.168ENSAOCG00000024104-10087.763Amphiprion_ocellaris
ENSOMEG00000007677-9584.973ENSAOCG00000021274rbms39181.633Amphiprion_ocellaris
ENSOMEG00000007677-8983.807ENSAPEG00000016299rbms39383.807Amphiprion_percula
ENSOMEG00000007677-9888.800ENSAPEG00000009481-9090.217Amphiprion_percula
ENSOMEG00000007677-9585.246ENSATEG00000024295rbms39182.564Anabas_testudineus
ENSOMEG00000007677-10097.906ENSATEG00000008433-9297.906Anabas_testudineus
ENSOMEG00000007677-9586.772ENSAPLG00000012270RBMS39284.673Anas_platyrhynchos
ENSOMEG00000007677-9589.315ENSACAG00000028664RBMS39187.273Anolis_carolinensis
ENSOMEG00000007677-9686.544ENSANAG00000021899RBMS39184.962Aotus_nancymaae
ENSOMEG00000007677-9981.491ENSACLG00000018506rbms39981.748Astatotilapia_calliptera
ENSOMEG00000007677-10097.120ENSACLG00000008976-10085.417Astatotilapia_calliptera
ENSOMEG00000007677-6388.940ENSAMXG00000043770-8788.889Astyanax_mexicanus
ENSOMEG00000007677-9689.617ENSAMXG00000020388rbms39189.211Astyanax_mexicanus
ENSOMEG00000007677-9590.411ENSBTAG00000044062RBMS39984.826Bos_taurus
ENSOMEG00000007677-9686.544ENSCJAG00000004312RBMS39184.962Callithrix_jacchus
ENSOMEG00000007677-9685.864ENSCAFG00000005464RBMS39184.328Canis_familiaris
ENSOMEG00000007677-9685.864ENSCAFG00020024980RBMS39284.328Canis_lupus_dingo
ENSOMEG00000007677-9589.863ENSCHIG00000009144RBMS39187.824Capra_hircus
ENSOMEG00000007677-8384.848ENSTSYG00000002615RBMS39984.848Carlito_syrichta
ENSOMEG00000007677-9683.014ENSCAPG00000017783RBMS39782.368Cavia_aperea
ENSOMEG00000007677-9689.071ENSCPOG00000006457RBMS39188.189Cavia_porcellus
ENSOMEG00000007677-9686.544ENSCCAG00000008671RBMS39184.962Cebus_capucinus
ENSOMEG00000007677-9686.126ENSCATG00000013222RBMS39284.577Cercocebus_atys
ENSOMEG00000007677-9689.071ENSCLAG00000005866RBMS39187.306Chinchilla_lanigera
ENSOMEG00000007677-7086.667ENSCSAG00000009655RBMS39986.667Chlorocebus_sabaeus
ENSOMEG00000007677-8884.986ENSCHOG00000000758RBMS38084.986Choloepus_hoffmanni
ENSOMEG00000007677-9589.863ENSCPBG00000022678RBMS39090.145Chrysemys_picta_bellii
ENSOMEG00000007677-9686.280ENSCANG00000032137RBMS39184.712Colobus_angolensis_palliatus
ENSOMEG00000007677-9687.432ENSCGRG00001007243Rbms39186.877Cricetulus_griseus_chok1gshd
ENSOMEG00000007677-9687.432ENSCGRG00000004599Rbms39186.877Cricetulus_griseus_crigri
ENSOMEG00000007677-10096.335ENSCSEG00000014677-8998.065Cynoglossus_semilaevis
ENSOMEG00000007677-9685.014ENSCSEG00000010011RBMS39582.609Cynoglossus_semilaevis
ENSOMEG00000007677-10097.389ENSCVAG00000022814-10097.389Cyprinodon_variegatus
ENSOMEG00000007677-9585.246ENSCVAG00000022354rbms39182.902Cyprinodon_variegatus
ENSOMEG00000007677-9688.798ENSDARG00000044574rbms310095.139Danio_rerio
ENSOMEG00000007677-9689.071ENSDNOG00000016645RBMS38887.921Dasypus_novemcinctus
ENSOMEG00000007677-9688.798ENSDORG00000007220Rbms39187.047Dipodomys_ordii
ENSOMEG00000007677-7979.130ENSETEG00000009485-8069.714Echinops_telfairi
ENSOMEG00000007677-7953.846ENSEBUG00000005830rbms38953.846Eptatretus_burgeri
ENSOMEG00000007677-9689.344ENSEASG00005006152RBMS39187.565Equus_asinus_asinus
ENSOMEG00000007677-9689.344ENSECAG00000017871RBMS39187.565Equus_caballus
ENSOMEG00000007677-8579.532ENSEEUG00000014337RBMS39178.177Erinaceus_europaeus
ENSOMEG00000007677-9980.463ENSELUG00000002862rbms39980.463Esox_lucius
ENSOMEG00000007677-10095.288ENSELUG00000006905-10095.288Esox_lucius
ENSOMEG00000007677-9589.315ENSFCAG00000002130RBMS39187.306Felis_catus
ENSOMEG00000007677-9689.617ENSFALG00000009165RBMS39187.792Ficedula_albicollis
ENSOMEG00000007677-9688.525ENSFDAG00000008278RBMS39186.788Fukomys_damarensis
ENSOMEG00000007677-9576.022ENSFHEG00000004787RBMS39476.022Fundulus_heteroclitus
ENSOMEG00000007677-9998.175ENSGMOG00000002600-9788.861Gadus_morhua
ENSOMEG00000007677-9689.617ENSGALG00000011439RBMS39187.792Gallus_gallus
ENSOMEG00000007677-9587.462ENSGAFG00000000168rbms39983.204Gambusia_affinis
ENSOMEG00000007677-10097.389ENSGAFG00000003329-9795.545Gambusia_affinis
ENSOMEG00000007677-7187.454ENSGAGG00000004039RBMS39987.454Gopherus_agassizii
ENSOMEG00000007677-9686.544ENSGGOG00000007228RBMS39184.962Gorilla_gorilla
ENSOMEG00000007677-6289.671ENSHBUG00000021196rbms38284.681Haplochromis_burtoni
ENSOMEG00000007677-10097.187ENSHBUG00000019785-9597.187Haplochromis_burtoni
ENSOMEG00000007677-9689.071ENSHGLG00000002170RBMS39187.306Heterocephalus_glaber_female
ENSOMEG00000007677-9689.071ENSHGLG00100014278RBMS39187.306Heterocephalus_glaber_male
ENSOMEG00000007677-10096.345ENSHCOG00000007894-9896.438Hippocampus_comes
ENSOMEG00000007677-9689.617ENSIPUG00000017680rbms39189.474Ictalurus_punctatus
ENSOMEG00000007677-9689.373ENSSTOG00000006324RBMS39187.824Ictidomys_tridecemlineatus
ENSOMEG00000007677-9587.945ENSJJAG00000014708Rbms39186.010Jaculus_jaculus
ENSOMEG00000007677-9584.153ENSKMAG00000020500rbms39180.407Kryptolebias_marmoratus
ENSOMEG00000007677-10097.382ENSKMAG00000012586-9297.382Kryptolebias_marmoratus
ENSOMEG00000007677-10096.931ENSLBEG00000027388-10096.931Labrus_bergylta
ENSOMEG00000007677-6675.379ENSLBEG00000006677rbms39775.379Labrus_bergylta
ENSOMEG00000007677-9591.507ENSLACG00000010581RBMS39189.583Latimeria_chalumnae
ENSOMEG00000007677-7691.349ENSLOCG00000002328rbms39991.349Lepisosteus_oculatus
ENSOMEG00000007677-9585.827ENSLAFG00000000354RBMS39284.080Loxodonta_africana
ENSOMEG00000007677-9689.344ENSMFAG00000033300RBMS39187.565Macaca_fascicularis
ENSOMEG00000007677-9689.344ENSMMUG00000004404RBMS39187.565Macaca_mulatta
ENSOMEG00000007677-9686.280ENSMNEG00000035839RBMS39984.080Macaca_nemestrina
ENSOMEG00000007677-9686.126ENSMLEG00000029464RBMS39284.577Mandrillus_leucophaeus
ENSOMEG00000007677-10097.954ENSMAMG00000002176-10097.954Mastacembelus_armatus
ENSOMEG00000007677-9585.792ENSMAMG00000024043rbms39183.632Mastacembelus_armatus
ENSOMEG00000007677-9584.426ENSMZEG00005006308rbms39181.748Maylandia_zebra
ENSOMEG00000007677-10097.120ENSMZEG00005026469-9392.736Maylandia_zebra
ENSOMEG00000007677-9687.432ENSMAUG00000016436Rbms39186.877Mesocricetus_auratus
ENSOMEG00000007677-9686.544ENSMICG00000049249RBMS39184.962Microcebus_murinus
ENSOMEG00000007677-9686.885ENSMOCG00000006997Rbms39186.614Microtus_ochrogaster
ENSOMEG00000007677-10096.073ENSMMOG00000015071-9794.293Mola_mola
ENSOMEG00000007677-8984.571ENSMMOG00000008471RBMS39584.857Mola_mola
ENSOMEG00000007677-9584.576ENSMODG00000015125RBMS38684.576Monodelphis_domestica
ENSOMEG00000007677-10097.382ENSMALG00000009155-9297.382Monopterus_albus
ENSOMEG00000007677-9585.246ENSMALG00000019536RBMS39282.609Monopterus_albus
ENSOMEG00000007677-9885.829MGP_CAROLIEiJ_G0032783Rbms310088.384Mus_caroli
ENSOMEG00000007677-9587.397ENSMUSG00000039607Rbms39988.384Mus_musculus
ENSOMEG00000007677-9686.921MGP_PahariEiJ_G0015650Rbms310088.384Mus_pahari
ENSOMEG00000007677-9587.397MGP_SPRETEiJ_G0033930Rbms310088.384Mus_spretus
ENSOMEG00000007677-9586.089ENSMPUG00000011956RBMS39284.328Mustela_putorius_furo
ENSOMEG00000007677-9689.344ENSMLUG00000000659RBMS39187.565Myotis_lucifugus
ENSOMEG00000007677-9689.071ENSNGAG00000014039Rbms39188.451Nannospalax_galili
ENSOMEG00000007677-10096.859ENSNBRG00000018065-9990.220Neolamprologus_brichardi
ENSOMEG00000007677-9686.544ENSNLEG00000004129RBMS39184.962Nomascus_leucogenys
ENSOMEG00000007677-9678.534ENSMEUG00000004772RBMS39776.179Notamacropus_eugenii
ENSOMEG00000007677-9685.752ENSOPRG00000006808RBMS37884.211Ochotona_princeps
ENSOMEG00000007677-9689.344ENSODEG00000003651RBMS39187.565Octodon_degus
ENSOMEG00000007677-9584.426ENSONIG00000007172rbms39382.171Oreochromis_niloticus
ENSOMEG00000007677-9586.089ENSOANG00000010529RBMS39184.328Ornithorhynchus_anatinus
ENSOMEG00000007677-9685.340ENSOCUG00000004840RBMS39183.831Oryctolagus_cuniculus
ENSOMEG00000007677-10099.476ENSORLG00000002306-10092.857Oryzias_latipes
ENSOMEG00000007677-9583.333ENSORLG00000005370RBMS39181.395Oryzias_latipes
ENSOMEG00000007677-9682.834ENSORLG00020022674RBMS39181.137Oryzias_latipes_hni
ENSOMEG00000007677-10099.738ENSORLG00020008496-10097.129Oryzias_latipes_hni
ENSOMEG00000007677-9583.607ENSORLG00015005509rbms39181.654Oryzias_latipes_hsok
ENSOMEG00000007677-10099.738ENSORLG00015015719-9299.738Oryzias_latipes_hsok
ENSOMEG00000007677-9585.564ENSOARG00000014684RBMS39183.831Ovis_aries
ENSOMEG00000007677-9686.544ENSPPAG00000036519RBMS39184.962Pan_paniscus
ENSOMEG00000007677-9586.243ENSPPRG00000002761RBMS39184.461Panthera_pardus
ENSOMEG00000007677-9589.315ENSPTIG00000011568RBMS39187.306Panthera_tigris_altaica
ENSOMEG00000007677-9689.617ENSPTRG00000014709RBMS39187.824Pan_troglodytes
ENSOMEG00000007677-9686.126ENSPANG00000010234RBMS39284.577Papio_anubis
ENSOMEG00000007677-6392.627ENSPKIG00000007989-8792.857Paramormyrops_kingsleyae
ENSOMEG00000007677-9589.589ENSPSIG00000005269RBMS39187.532Pelodiscus_sinensis
ENSOMEG00000007677-10097.120ENSPMGG00000021683-10097.120Periophthalmus_magnuspinnatus
ENSOMEG00000007677-8984.483ENSPMGG00000021544rbms39184.483Periophthalmus_magnuspinnatus
ENSOMEG00000007677-9684.110ENSPEMG00000001117Rbms39183.684Peromyscus_maniculatus_bairdii
ENSOMEG00000007677-7791.892ENSPCIG00000006106RBMS38487.278Phascolarctos_cinereus
ENSOMEG00000007677-9585.246ENSPFOG00000017887rbms39182.946Poecilia_formosa
ENSOMEG00000007677-8481.620ENSPLAG00000016866-8281.620Poecilia_latipinna
ENSOMEG00000007677-10097.650ENSPMEG00000002993-9795.792Poecilia_mexicana
ENSOMEG00000007677-9685.054ENSPREG00000011880rbms39682.776Poecilia_reticulata
ENSOMEG00000007677-10097.650ENSPREG00000018221-9785.135Poecilia_reticulata
ENSOMEG00000007677-9670.942ENSPPYG00000014050RBMS37470.149Pongo_abelii
ENSOMEG00000007677-9564.644ENSPCAG00000006307RBMS39163.682Procavia_capensis
ENSOMEG00000007677-9686.807ENSPCOG00000017136RBMS39284.577Propithecus_coquereli
ENSOMEG00000007677-9084.530ENSPVAG00000014037RBMS38284.530Pteropus_vampyrus
ENSOMEG00000007677-9584.153ENSPNYG00000010546rbms39181.491Pundamilia_nyererei
ENSOMEG00000007677-10097.120ENSPNYG00000012624-9990.562Pundamilia_nyererei
ENSOMEG00000007677-9689.617ENSPNAG00000001800rbms39189.211Pygocentrus_nattereri
ENSOMEG00000007677-5091.379ENSPNAG00000026763-7791.908Pygocentrus_nattereri
ENSOMEG00000007677-9587.397ENSRNOG00000025881Rbms39186.614Rattus_norvegicus
ENSOMEG00000007677-9686.016ENSRBIG00000035863RBMS39184.461Rhinopithecus_bieti
ENSOMEG00000007677-9586.243ENSRROG00000027512RBMS39784.461Rhinopithecus_roxellana
ENSOMEG00000007677-9686.544ENSSBOG00000020232RBMS39184.962Saimiri_boliviensis_boliviensis
ENSOMEG00000007677-9682.514ENSSHAG00000002411RBMS39980.879Sarcophilus_harrisii
ENSOMEG00000007677-10094.503ENSSFOG00015008578rbms310094.503Scleropages_formosus
ENSOMEG00000007677-9692.391ENSSMAG00000020065-9298.235Scophthalmus_maximus
ENSOMEG00000007677-9585.015ENSSMAG00000004997rbms39983.333Scophthalmus_maximus
ENSOMEG00000007677-9585.246ENSSDUG00000013656RBMS39482.353Seriola_dumerili
ENSOMEG00000007677-10098.168ENSSDUG00000019287-9298.168Seriola_dumerili
ENSOMEG00000007677-9585.519ENSSLDG00000020276RBMS39181.980Seriola_lalandi_dorsalis
ENSOMEG00000007677-10098.168ENSSLDG00000013224-9298.168Seriola_lalandi_dorsalis
ENSOMEG00000007677-7593.810ENSSARG00000000695RBMS39873.204Sorex_araneus
ENSOMEG00000007677-7585.959ENSSPUG00000017197RBMS39784.848Sphenodon_punctatus
ENSOMEG00000007677-9584.973ENSSPAG00000020693rbms39883.708Stegastes_partitus
ENSOMEG00000007677-10098.168ENSSPAG00000003983-9989.423Stegastes_partitus
ENSOMEG00000007677-9689.071ENSSSCG00000036381RBMS39187.306Sus_scrofa
ENSOMEG00000007677-8384.384ENSTGUG00000003572RBMS39984.384Taeniopygia_guttata
ENSOMEG00000007677-9683.651ENSTRUG00000021719RBMS39180.818Takifugu_rubripes
ENSOMEG00000007677-8996.188ENSTRUG00000007482-8992.244Takifugu_rubripes
ENSOMEG00000007677-8587.427ENSTBEG00000005362RBMS39885.635Tupaia_belangeri
ENSOMEG00000007677-9585.302ENSTTRG00000006202RBMS39283.582Tursiops_truncatus
ENSOMEG00000007677-9685.864ENSUMAG00000000263RBMS39184.328Ursus_maritimus
ENSOMEG00000007677-9575.853ENSVPAG00000003842RBMS39774.627Vicugna_pacos
ENSOMEG00000007677-9586.089ENSVVUG00000004660RBMS39990.435Vulpes_vulpes
ENSOMEG00000007677-7680.782ENSXETG00000032055RBMS39880.782Xenopus_tropicalis
ENSOMEG00000007677-10082.005ENSXCOG00000019600-10082.005Xiphophorus_couchianus
ENSOMEG00000007677-10097.650ENSXMAG00000014382-9795.792Xiphophorus_maculatus
ENSOMEG00000007677-9585.519ENSXMAG00000021783rbms39978.090Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us