EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000007770 (Gene tree)
Gene ID: 112136797
Gene Symbol: rad54l
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 12401 bases
Position: chrNVQA01000035.1:5348598-5360998
Accession: 112136797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000006715	ResIII	PF04851.15	1.3e-08	1	1
ENSOMEP00000006715	DEAD	PF00270.29	8.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000005343	-	2388	-	ENSOMEP00000006715	733 (aa)	XP_024114467	UPI000CF83A8A
ENSOMET00000005391	-	1461	-	ENSOMEP00000006691	486 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000007770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000007770's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000007770	rad54l	89	44.461	ENSOMEG00000004345	rad54b	92	42.585
ENSOMEG00000007770	rad54l	68	39.175	ENSOMEG00000000135	hells	56	39.175

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000007770	rad54l	99	78.658	ENSG00000085999	RAD54L	100	85.333	Homo_sapiens
ENSOMEG00000007770	rad54l	99	85.326	ENSAPOG00000011643	rad54l	99	85.326	Acanthochromis_polyacanthus
ENSOMEG00000007770	rad54l	99	77.688	ENSAMEG00000013902	RAD54L	99	77.688	Ailuropoda_melanoleuca
ENSOMEG00000007770	rad54l	99	83.696	ENSACIG00000001939	rad54l	99	83.696	Amphilophus_citrinellus
ENSOMEG00000007770	rad54l	99	88.315	ENSAOCG00000017576	rad54l	99	88.315	Amphiprion_ocellaris
ENSOMEG00000007770	rad54l	96	88.375	ENSAPEG00000020658	rad54l	99	88.375	Amphiprion_percula
ENSOMEG00000007770	rad54l	95	88.984	ENSATEG00000006767	rad54l	99	88.984	Anabas_testudineus
ENSOMEG00000007770	rad54l	94	82.923	ENSAPLG00000006389	RAD54L	98	82.923	Anas_platyrhynchos
ENSOMEG00000007770	rad54l	99	81.023	ENSACAG00000002312	RAD54L	99	81.023	Anolis_carolinensis
ENSOMEG00000007770	rad54l	99	78.926	ENSANAG00000035439	RAD54L	99	78.926	Aotus_nancymaae
ENSOMEG00000007770	rad54l	99	83.198	ENSACLG00000018711	rad54l	99	83.198	Astatotilapia_calliptera
ENSOMEG00000007770	rad54l	99	85.020	ENSAMXG00000012777	rad54l	99	85.020	Astyanax_mexicanus
ENSOMEG00000007770	rad54l	99	78.552	ENSBTAG00000019901	RAD54L	99	78.552	Bos_taurus
ENSOMEG00000007770	rad54l	94	57.328	WBGene00004298	rad-54	85	57.328	Caenorhabditis_elegans
ENSOMEG00000007770	rad54l	99	76.975	ENSCJAG00000021080	RAD54L	95	76.975	Callithrix_jacchus
ENSOMEG00000007770	rad54l	99	77.450	ENSCAFG00000004272	RAD54L	99	77.450	Canis_familiaris
ENSOMEG00000007770	rad54l	99	77.419	ENSCAFG00020015066	RAD54L	99	77.419	Canis_lupus_dingo
ENSOMEG00000007770	rad54l	99	78.389	ENSCHIG00000020118	RAD54L	99	78.389	Capra_hircus
ENSOMEG00000007770	rad54l	99	77.882	ENSTSYG00000002032	RAD54L	99	77.882	Carlito_syrichta
ENSOMEG00000007770	rad54l	99	78.792	ENSCPOG00000006768	RAD54L	99	78.792	Cavia_porcellus
ENSOMEG00000007770	rad54l	99	79.060	ENSCCAG00000025783	RAD54L	99	79.060	Cebus_capucinus
ENSOMEG00000007770	rad54l	99	78.926	ENSCATG00000030589	RAD54L	99	78.926	Cercocebus_atys
ENSOMEG00000007770	rad54l	99	79.195	ENSCLAG00000004645	RAD54L	99	79.195	Chinchilla_lanigera
ENSOMEG00000007770	rad54l	99	78.926	ENSCSAG00000001229	RAD54L	99	78.926	Chlorocebus_sabaeus
ENSOMEG00000007770	rad54l	99	80.054	ENSCPBG00000005675	RAD54L	99	80.054	Chrysemys_picta_bellii
ENSOMEG00000007770	rad54l	99	62.581	ENSCING00000024456	-	99	62.581	Ciona_intestinalis
ENSOMEG00000007770	rad54l	99	62.861	ENSCSAVG00000010859	-	99	62.910	Ciona_savignyi
ENSOMEG00000007770	rad54l	99	78.926	ENSCANG00000034891	RAD54L	99	78.926	Colobus_angolensis_palliatus
ENSOMEG00000007770	rad54l	99	78.706	ENSCGRG00001014807	Rad54l	99	78.706	Cricetulus_griseus_chok1gshd
ENSOMEG00000007770	rad54l	99	78.706	ENSCGRG00000016038	Rad54l	99	78.706	Cricetulus_griseus_crigri
ENSOMEG00000007770	rad54l	99	85.246	ENSCSEG00000001983	rad54l	99	85.246	Cynoglossus_semilaevis
ENSOMEG00000007770	rad54l	88	86.853	ENSCVAG00000019561	rad54l	100	87.926	Cyprinodon_variegatus
ENSOMEG00000007770	rad54l	99	83.582	ENSDARG00000018623	rad54l	99	83.582	Danio_rerio
ENSOMEG00000007770	rad54l	99	77.748	ENSDNOG00000003395	RAD54L	99	77.748	Dasypus_novemcinctus
ENSOMEG00000007770	rad54l	99	72.487	ENSDORG00000002632	Rad54l	99	72.487	Dipodomys_ordii
ENSOMEG00000007770	rad54l	99	53.805	FBgn0002989	okr	95	53.538	Drosophila_melanogaster
ENSOMEG00000007770	rad54l	77	75.410	ENSETEG00000000550	RAD54L	78	77.869	Echinops_telfairi
ENSOMEG00000007770	rad54l	100	77.927	ENSEASG00005004511	RAD54L	96	81.465	Equus_asinus_asinus
ENSOMEG00000007770	rad54l	99	78.389	ENSECAG00000008760	RAD54L	99	78.523	Equus_caballus
ENSOMEG00000007770	rad54l	92	81.778	ENSEEUG00000008113	RAD54L	90	81.778	Erinaceus_europaeus
ENSOMEG00000007770	rad54l	99	85.753	ENSELUG00000002295	rad54l	99	85.753	Esox_lucius
ENSOMEG00000007770	rad54l	99	76.913	ENSFCAG00000003444	RAD54L	99	76.913	Felis_catus
ENSOMEG00000007770	rad54l	99	79.784	ENSFALG00000009480	RAD54L	99	80.323	Ficedula_albicollis
ENSOMEG00000007770	rad54l	99	78.658	ENSFDAG00000007806	RAD54L	99	78.658	Fukomys_damarensis
ENSOMEG00000007770	rad54l	61	84.494	ENSFHEG00000009824	rad54l	83	79.834	Fundulus_heteroclitus
ENSOMEG00000007770	rad54l	99	83.492	ENSGMOG00000014568	rad54l	99	83.492	Gadus_morhua
ENSOMEG00000007770	rad54l	99	80.405	ENSGALG00000010356	RAD54L	92	80.405	Gallus_gallus
ENSOMEG00000007770	rad54l	91	83.061	ENSGAFG00000011110	rad54l	100	83.061	Gambusia_affinis
ENSOMEG00000007770	rad54l	99	85.811	ENSGACG00000003111	rad54l	97	85.811	Gasterosteus_aculeatus
ENSOMEG00000007770	rad54l	99	79.217	ENSGAGG00000014089	RAD54L	96	79.217	Gopherus_agassizii
ENSOMEG00000007770	rad54l	99	78.523	ENSGGOG00000010602	RAD54L	99	78.523	Gorilla_gorilla
ENSOMEG00000007770	rad54l	99	83.333	ENSHBUG00000007793	rad54l	99	83.333	Haplochromis_burtoni
ENSOMEG00000007770	rad54l	99	78.792	ENSHGLG00000000753	RAD54L	99	78.658	Heterocephalus_glaber_female
ENSOMEG00000007770	rad54l	99	78.658	ENSHGLG00100016987	RAD54L	99	78.658	Heterocephalus_glaber_male
ENSOMEG00000007770	rad54l	99	83.288	ENSIPUG00000015999	rad54l	99	86.561	Ictalurus_punctatus
ENSOMEG00000007770	rad54l	99	78.121	ENSSTOG00000029125	RAD54L	99	77.987	Ictidomys_tridecemlineatus
ENSOMEG00000007770	rad54l	99	65.457	ENSJJAG00000000235	-	99	65.188	Jaculus_jaculus
ENSOMEG00000007770	rad54l	99	85.190	ENSKMAG00000009944	rad54l	99	85.190	Kryptolebias_marmoratus
ENSOMEG00000007770	rad54l	99	87.246	ENSLBEG00000014617	rad54l	97	90.030	Labrus_bergylta
ENSOMEG00000007770	rad54l	99	83.649	ENSLOCG00000004144	rad54l	100	84.226	Lepisosteus_oculatus
ENSOMEG00000007770	rad54l	99	78.091	ENSLAFG00000007583	RAD54L	99	78.495	Loxodonta_africana
ENSOMEG00000007770	rad54l	99	79.060	ENSMFAG00000031241	RAD54L	99	79.060	Macaca_fascicularis
ENSOMEG00000007770	rad54l	99	79.060	ENSMMUG00000011568	RAD54L	99	79.060	Macaca_mulatta
ENSOMEG00000007770	rad54l	99	78.926	ENSMNEG00000038562	RAD54L	99	78.926	Macaca_nemestrina
ENSOMEG00000007770	rad54l	99	79.060	ENSMLEG00000038145	RAD54L	99	79.060	Mandrillus_leucophaeus
ENSOMEG00000007770	rad54l	99	85.637	ENSMAMG00000022180	rad54l	99	88.905	Mastacembelus_armatus
ENSOMEG00000007770	rad54l	99	83.062	ENSMZEG00005018081	rad54l	99	83.062	Maylandia_zebra
ENSOMEG00000007770	rad54l	99	80.514	ENSMGAG00000010634	RAD54L	99	80.514	Meleagris_gallopavo
ENSOMEG00000007770	rad54l	99	78.841	ENSMAUG00000020076	Rad54l	99	78.841	Mesocricetus_auratus
ENSOMEG00000007770	rad54l	99	79.060	ENSMICG00000003266	RAD54L	99	79.060	Microcebus_murinus
ENSOMEG00000007770	rad54l	99	79.111	ENSMOCG00000001778	Rad54l	99	79.111	Microtus_ochrogaster
ENSOMEG00000007770	rad54l	99	83.131	ENSMALG00000021148	rad54l	99	83.131	Monopterus_albus
ENSOMEG00000007770	rad54l	99	74.413	MGP_CAROLIEiJ_G0026325	Rad54l	99	74.413	Mus_caroli
ENSOMEG00000007770	rad54l	99	78.658	ENSMUSG00000028702	Rad54l	99	78.523	Mus_musculus
ENSOMEG00000007770	rad54l	99	78.629	MGP_PahariEiJ_G0028657	Rad54l	99	78.629	Mus_pahari
ENSOMEG00000007770	rad54l	99	78.792	MGP_SPRETEiJ_G0027297	Rad54l	99	78.658	Mus_spretus
ENSOMEG00000007770	rad54l	99	78.121	ENSMPUG00000012883	RAD54L	99	78.121	Mustela_putorius_furo
ENSOMEG00000007770	rad54l	99	78.226	ENSMLUG00000003763	RAD54L	99	78.226	Myotis_lucifugus
ENSOMEG00000007770	rad54l	99	78.360	ENSNGAG00000024213	Rad54l	99	78.360	Nannospalax_galili
ENSOMEG00000007770	rad54l	99	78.658	ENSNLEG00000016548	RAD54L	99	78.658	Nomascus_leucogenys
ENSOMEG00000007770	rad54l	92	79.792	ENSMEUG00000006793	RAD54L	99	79.792	Notamacropus_eugenii
ENSOMEG00000007770	rad54l	90	82.927	ENSOPRG00000016016	RAD54L	90	82.927	Ochotona_princeps
ENSOMEG00000007770	rad54l	99	79.060	ENSODEG00000008519	RAD54L	99	79.060	Octodon_degus
ENSOMEG00000007770	rad54l	99	83.333	ENSONIG00000007659	rad54l	99	83.333	Oreochromis_niloticus
ENSOMEG00000007770	rad54l	99	78.686	ENSOCUG00000005229	RAD54L	99	78.686	Oryctolagus_cuniculus
ENSOMEG00000007770	rad54l	100	96.589	ENSORLG00000002958	rad54l	100	96.589	Oryzias_latipes
ENSOMEG00000007770	rad54l	99	96.995	ENSORLG00020006554	rad54l	99	98.088	Oryzias_latipes_hni
ENSOMEG00000007770	rad54l	100	96.730	ENSORLG00015002907	rad54l	100	96.730	Oryzias_latipes_hsok
ENSOMEG00000007770	rad54l	99	78.447	ENSOARG00000002264	RAD54L	99	78.447	Ovis_aries
ENSOMEG00000007770	rad54l	99	78.523	ENSPPAG00000031222	RAD54L	99	78.523	Pan_paniscus
ENSOMEG00000007770	rad54l	99	77.047	ENSPPRG00000010317	RAD54L	99	77.047	Panthera_pardus
ENSOMEG00000007770	rad54l	99	77.047	ENSPTIG00000012200	RAD54L	99	77.047	Panthera_tigris_altaica
ENSOMEG00000007770	rad54l	99	78.523	ENSPTRG00000000689	RAD54L	99	78.523	Pan_troglodytes
ENSOMEG00000007770	rad54l	99	79.060	ENSPANG00000016295	RAD54L	99	79.060	Papio_anubis
ENSOMEG00000007770	rad54l	99	78.426	ENSPKIG00000016172	rad54l	99	78.426	Paramormyrops_kingsleyae
ENSOMEG00000007770	rad54l	98	80.355	ENSPSIG00000003258	RAD54L	99	80.355	Pelodiscus_sinensis
ENSOMEG00000007770	rad54l	99	79.512	ENSPMGG00000016335	rad54l	99	79.512	Periophthalmus_magnuspinnatus
ENSOMEG00000007770	rad54l	99	78.841	ENSPEMG00000011422	Rad54l	99	78.841	Peromyscus_maniculatus_bairdii
ENSOMEG00000007770	rad54l	99	70.968	ENSPMAG00000007719	rad54l	99	70.968	Petromyzon_marinus
ENSOMEG00000007770	rad54l	99	79.839	ENSPCIG00000029032	RAD54L	99	79.839	Phascolarctos_cinereus
ENSOMEG00000007770	rad54l	86	86.278	ENSPFOG00000013732	rad54l	99	86.278	Poecilia_formosa
ENSOMEG00000007770	rad54l	83	84.416	ENSPLAG00000023416	rad54l	99	84.416	Poecilia_latipinna
ENSOMEG00000007770	rad54l	91	83.655	ENSPMEG00000008299	rad54l	100	83.655	Poecilia_mexicana
ENSOMEG00000007770	rad54l	99	83.062	ENSPREG00000019955	rad54l	99	83.062	Poecilia_reticulata
ENSOMEG00000007770	rad54l	93	77.184	ENSPPYG00000001398	RAD54L	99	77.184	Pongo_abelii
ENSOMEG00000007770	rad54l	79	82.524	ENSPCAG00000005323	RAD54L	80	82.524	Procavia_capensis
ENSOMEG00000007770	rad54l	99	78.926	ENSPCOG00000015423	RAD54L	99	78.926	Propithecus_coquereli
ENSOMEG00000007770	rad54l	99	80.270	ENSPNYG00000002942	rad54l	99	80.270	Pundamilia_nyererei
ENSOMEG00000007770	rad54l	99	84.595	ENSPNAG00000012483	rad54l	99	84.595	Pygocentrus_nattereri
ENSOMEG00000007770	rad54l	99	78.389	ENSRNOG00000013148	Rad54l	99	78.389	Rattus_norvegicus
ENSOMEG00000007770	rad54l	99	79.060	ENSRBIG00000043495	RAD54L	99	79.060	Rhinopithecus_bieti
ENSOMEG00000007770	rad54l	99	79.060	ENSRROG00000020844	RAD54L	99	79.060	Rhinopithecus_roxellana
ENSOMEG00000007770	rad54l	81	49.457	YGL163C	RAD54	71	49.457	Saccharomyces_cerevisiae
ENSOMEG00000007770	rad54l	99	79.060	ENSSBOG00000024672	RAD54L	99	79.060	Saimiri_boliviensis_boliviensis
ENSOMEG00000007770	rad54l	99	79.839	ENSSHAG00000000110	RAD54L	99	79.839	Sarcophilus_harrisii
ENSOMEG00000007770	rad54l	99	87.009	ENSSDUG00000019147	rad54l	99	87.009	Seriola_dumerili
ENSOMEG00000007770	rad54l	99	87.009	ENSSLDG00000012330	rad54l	99	87.009	Seriola_lalandi_dorsalis
ENSOMEG00000007770	rad54l	83	76.565	ENSSARG00000006689	RAD54L	100	76.565	Sorex_araneus
ENSOMEG00000007770	rad54l	99	86.703	ENSSPAG00000011016	rad54l	99	86.703	Stegastes_partitus
ENSOMEG00000007770	rad54l	99	78.658	ENSSSCG00000003905	RAD54L	99	78.658	Sus_scrofa
ENSOMEG00000007770	rad54l	99	79.650	ENSTGUG00000008233	RAD54L	99	79.650	Taeniopygia_guttata
ENSOMEG00000007770	rad54l	99	82.514	ENSTRUG00000008410	rad54l	99	82.514	Takifugu_rubripes
ENSOMEG00000007770	rad54l	99	82.079	ENSTNIG00000004716	rad54l	99	81.682	Tetraodon_nigroviridis
ENSOMEG00000007770	rad54l	99	73.423	ENSTTRG00000006315	RAD54L	99	73.423	Tursiops_truncatus
ENSOMEG00000007770	rad54l	99	77.703	ENSUAMG00000011824	RAD54L	99	77.703	Ursus_americanus
ENSOMEG00000007770	rad54l	99	76.622	ENSUMAG00000023603	RAD54L	99	76.622	Ursus_maritimus
ENSOMEG00000007770	rad54l	99	77.315	ENSVVUG00000007201	RAD54L	99	77.315	Vulpes_vulpes
ENSOMEG00000007770	rad54l	97	75.140	ENSXETG00000004369	rad54l	99	75.140	Xenopus_tropicalis
ENSOMEG00000007770	rad54l	55	82.090	ENSXCOG00000016028	rad54l	80	86.104	Xiphophorus_couchianus