EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000007798 (Gene tree)
Gene ID: 112151301
Gene Symbol: pan3
Alias: -
Full Name: poly(A) specific ribonuclease subunit PAN3
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 17182 bases
Position: chrNVQA01000015.1:13881212-13898393
Accession: 112151301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000006701	zf-CCCH	PF00642.24	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000005322	-	4868	XM_024280151	ENSOMEP00000006723	788 (aa)	XP_024135919	UPI000CF7E914
ENSOMET00000005366	-	4724	-	ENSOMEP00000006701	740 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000007798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000007798's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000007798	pan3	99	77.068	ENSELUG00000014375	pan3	99	77.068	Esox_lucius
ENSOMEG00000007798	pan3	100	85.589	ENSKMAG00000008813	pan3	100	85.589	Kryptolebias_marmoratus
ENSOMEG00000007798	pan3	100	77.492	ENSLACG00000017156	PAN3	90	77.492	Latimeria_chalumnae
ENSOMEG00000007798	pan3	100	93.274	ENSORLG00000008758	pan3	100	93.274	Oryzias_latipes
ENSOMEG00000007798	pan3	100	93.782	ENSORLG00015014393	pan3	100	93.782	Oryzias_latipes_hsok
ENSOMEG00000007798	pan3	72	68.013	ENSPKIG00000008329	-	96	68.013	Paramormyrops_kingsleyae
ENSOMEG00000007798	pan3	97	62.404	ENSPMAG00000002383	pan3	100	62.788	Petromyzon_marinus
ENSOMEG00000007798	pan3	100	86.812	ENSPREG00000019582	pan3	100	86.812	Poecilia_reticulata
ENSOMEG00000007798	pan3	100	87.137	ENSSMAG00000014517	pan3	98	87.137	Scophthalmus_maximus
ENSOMEG00000007798	pan3	100	73.043	ENSXETG00000011794	pan3	100	73.292	Xenopus_tropicalis