EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000007801 (Gene tree)
Gene ID: 112152818
Gene Symbol: rbm28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 7136 bases
Position: chrNVQA01000016.1:13423084-13430219
Accession: 112152818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000026150	RRM_1	PF00076.22	9.2e-59	1	3
ENSOMEP00000026150	RRM_1	PF00076.22	9.2e-59	2	3
ENSOMEP00000026150	RRM_1	PF00076.22	9.2e-59	3	3
ENSOMEP00000006714	RRM_1	PF00076.22	1.3e-58	1	3
ENSOMEP00000006714	RRM_1	PF00076.22	1.3e-58	2	3
ENSOMEP00000006714	RRM_1	PF00076.22	1.3e-58	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000005342	-	2864	XM_024282613	ENSOMEP00000006714	757 (aa)	XP_024138381	UPI000CF7FECF
ENSOMET00000005285	-	3749	-	ENSOMEP00000026150	714 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000007801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000007801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000007801	rbm28	100	50.187	ENSG00000106344	RBM28	100	49.758	Homo_sapiens
ENSOMEG00000007801	rbm28	58	76.524	ENSAPOG00000015512	rbm28	59	76.432	Acanthochromis_polyacanthus
ENSOMEG00000007801	rbm28	97	58.621	ENSAMEG00000004776	RBM28	64	58.974	Ailuropoda_melanoleuca
ENSOMEG00000007801	rbm28	57	72.558	ENSACIG00000023153	rbm28	91	72.558	Amphilophus_citrinellus
ENSOMEG00000007801	rbm28	58	76.298	ENSAOCG00000000462	rbm28	59	76.211	Amphiprion_ocellaris
ENSOMEG00000007801	rbm28	58	76.072	ENSAPEG00000012996	rbm28	59	75.991	Amphiprion_percula
ENSOMEG00000007801	rbm28	60	66.250	ENSATEG00000001672	rbm28	61	66.250	Anabas_testudineus
ENSOMEG00000007801	rbm28	100	50.312	ENSANAG00000033922	RBM28	78	67.500	Aotus_nancymaae
ENSOMEG00000007801	rbm28	100	69.935	ENSACLG00000025024	rbm28	59	76.044	Astatotilapia_calliptera
ENSOMEG00000007801	rbm28	59	61.830	ENSAMXG00000000763	rbm28	99	62.444	Astyanax_mexicanus
ENSOMEG00000007801	rbm28	68	67.500	ENSBTAG00000017001	RBM28	79	67.500	Bos_taurus
ENSOMEG00000007801	rbm28	100	49.504	ENSCJAG00000017731	RBM28	77	67.500	Callithrix_jacchus
ENSOMEG00000007801	rbm28	100	52.865	ENSCAFG00000001667	RBM28	58	57.333	Canis_familiaris
ENSOMEG00000007801	rbm28	100	52.865	ENSCAFG00020021648	RBM28	58	57.333	Canis_lupus_dingo
ENSOMEG00000007801	rbm28	63	55.833	ENSCHIG00000014146	RBM28	59	57.395	Capra_hircus
ENSOMEG00000007801	rbm28	68	65.000	ENSTSYG00000002892	RBM28	78	65.000	Carlito_syrichta
ENSOMEG00000007801	rbm28	64	54.949	ENSCPOG00000006253	RBM28	58	55.965	Cavia_porcellus
ENSOMEG00000007801	rbm28	69	67.500	ENSCCAG00000035105	RBM28	77	67.500	Cebus_capucinus
ENSOMEG00000007801	rbm28	100	50.623	ENSCATG00000040497	RBM28	77	67.500	Cercocebus_atys
ENSOMEG00000007801	rbm28	64	55.464	ENSCLAG00000003707	RBM28	61	57.206	Chinchilla_lanigera
ENSOMEG00000007801	rbm28	100	50.566	ENSCSAG00000010161	RBM28	58	56.984	Chlorocebus_sabaeus
ENSOMEG00000007801	rbm28	60	52.419	ENSCHOG00000001994	-	63	52.419	Choloepus_hoffmanni
ENSOMEG00000007801	rbm28	53	52.113	ENSCPBG00000018088	RBM28	78	52.278	Chrysemys_picta_bellii
ENSOMEG00000007801	rbm28	55	58.427	ENSCSAVG00000007149	-	94	42.059	Ciona_savignyi
ENSOMEG00000007801	rbm28	55	67.500	ENSCANG00000038397	RBM28	67	67.500	Colobus_angolensis_palliatus
ENSOMEG00000007801	rbm28	65	55.354	ENSCGRG00001021278	Rbm28	56	57.301	Cricetulus_griseus_chok1gshd
ENSOMEG00000007801	rbm28	100	52.645	ENSCGRG00000005098	Rbm28	58	57.301	Cricetulus_griseus_crigri
ENSOMEG00000007801	rbm28	100	62.663	ENSCSEG00000004212	rbm28	60	70.705	Cynoglossus_semilaevis
ENSOMEG00000007801	rbm28	60	74.614	ENSCVAG00000010493	rbm28	58	74.558	Cyprinodon_variegatus
ENSOMEG00000007801	rbm28	83	64.083	ENSDARG00000025332	rbm28	75	59.780	Danio_rerio
ENSOMEG00000007801	rbm28	100	50.438	ENSDNOG00000001124	RBM28	58	56.209	Dasypus_novemcinctus
ENSOMEG00000007801	rbm28	65	52.400	ENSDORG00000004184	Rbm28	86	56.044	Dipodomys_ordii
ENSOMEG00000007801	rbm28	100	36.974	ENSEBUG00000004419	rbm28	94	44.018	Eptatretus_burgeri
ENSOMEG00000007801	rbm28	65	54.150	ENSEASG00005008528	RBM28	57	57.081	Equus_asinus_asinus
ENSOMEG00000007801	rbm28	65	54.150	ENSECAG00000007745	RBM28	57	57.081	Equus_caballus
ENSOMEG00000007801	rbm28	65	51.004	ENSEEUG00000002389	RBM28	58	52.423	Erinaceus_europaeus
ENSOMEG00000007801	rbm28	100	59.085	ENSELUG00000020602	rbm28	59	64.316	Esox_lucius
ENSOMEG00000007801	rbm28	100	52.296	ENSFCAG00000000946	RBM28	79	67.500	Felis_catus
ENSOMEG00000007801	rbm28	100	51.069	ENSFDAG00000010169	RBM28	59	55.724	Fukomys_damarensis
ENSOMEG00000007801	rbm28	99	57.507	ENSGMOG00000007091	rbm28	60	62.277	Gadus_morhua
ENSOMEG00000007801	rbm28	60	73.289	ENSGAFG00000004802	rbm28	98	73.289	Gambusia_affinis
ENSOMEG00000007801	rbm28	59	70.179	ENSGACG00000012612	rbm28	75	69.890	Gasterosteus_aculeatus
ENSOMEG00000007801	rbm28	83	55.102	ENSGAGG00000008873	RBM28	81	64.706	Gopherus_agassizii
ENSOMEG00000007801	rbm28	95	48.813	ENSGGOG00000004644	RBM28	59	56.416	Gorilla_gorilla
ENSOMEG00000007801	rbm28	99	68.263	ENSHBUG00000009611	rbm28	56	77.317	Haplochromis_burtoni
ENSOMEG00000007801	rbm28	100	51.484	ENSHGLG00000005409	RBM28	59	55.773	Heterocephalus_glaber_female
ENSOMEG00000007801	rbm28	100	51.484	ENSHGLG00100016458	RBM28	59	55.773	Heterocephalus_glaber_male
ENSOMEG00000007801	rbm28	99	49.223	ENSHCOG00000010597	rbm28	92	54.048	Hippocampus_comes
ENSOMEG00000007801	rbm28	61	48.718	ENSIPUG00000007103	rbm28	81	50.926	Ictalurus_punctatus
ENSOMEG00000007801	rbm28	66	54.563	ENSSTOG00000002169	RBM28	57	56.388	Ictidomys_tridecemlineatus
ENSOMEG00000007801	rbm28	57	54.667	ENSJJAG00000022400	Rbm28	59	55.333	Jaculus_jaculus
ENSOMEG00000007801	rbm28	99	67.313	ENSKMAG00000013348	rbm28	59	73.111	Kryptolebias_marmoratus
ENSOMEG00000007801	rbm28	60	71.586	ENSLBEG00000012998	rbm28	57	71.586	Labrus_bergylta
ENSOMEG00000007801	rbm28	100	60.309	ENSLOCG00000015541	rbm28	76	63.938	Lepisosteus_oculatus
ENSOMEG00000007801	rbm28	100	51.026	ENSLAFG00000010717	RBM28	58	57.301	Loxodonta_africana
ENSOMEG00000007801	rbm28	95	51.878	ENSMFAG00000031036	RBM28	77	67.500	Macaca_fascicularis
ENSOMEG00000007801	rbm28	70	67.500	ENSMMUG00000007250	RBM28	77	67.500	Macaca_mulatta
ENSOMEG00000007801	rbm28	100	53.186	ENSMNEG00000036970	RBM28	76	67.500	Macaca_nemestrina
ENSOMEG00000007801	rbm28	100	66.667	ENSMAMG00000008525	rbm28	59	73.289	Mastacembelus_armatus
ENSOMEG00000007801	rbm28	93	68.961	ENSMZEG00005019625	rbm28	64	76.044	Maylandia_zebra
ENSOMEG00000007801	rbm28	65	54.930	ENSMAUG00000002263	Rbm28	56	56.167	Mesocricetus_auratus
ENSOMEG00000007801	rbm28	66	52.883	ENSMICG00000000107	RBM28	61	56.889	Microcebus_murinus
ENSOMEG00000007801	rbm28	100	50.754	ENSMOCG00000014615	Rbm28	59	56.332	Microtus_ochrogaster
ENSOMEG00000007801	rbm28	59	65.778	ENSMMOG00000008600	rbm28	91	65.333	Mola_mola
ENSOMEG00000007801	rbm28	64	53.579	ENSMODG00000015151	RBM28	58	56.182	Monodelphis_domestica
ENSOMEG00000007801	rbm28	60	71.965	ENSMALG00000006419	rbm28	58	71.965	Monopterus_albus
ENSOMEG00000007801	rbm28	100	52.196	MGP_CAROLIEiJ_G0028162	Rbm28	58	56.703	Mus_caroli
ENSOMEG00000007801	rbm28	100	51.975	ENSMUSG00000029701	Rbm28	58	57.556	Mus_musculus
ENSOMEG00000007801	rbm28	100	52.542	MGP_PahariEiJ_G0021920	Rbm28	58	56.858	Mus_pahari
ENSOMEG00000007801	rbm28	100	51.592	MGP_SPRETEiJ_G0029162	Rbm28	58	57.111	Mus_spretus
ENSOMEG00000007801	rbm28	100	51.965	ENSMPUG00000006511	RBM28	58	57.556	Mustela_putorius_furo
ENSOMEG00000007801	rbm28	65	55.645	ENSMLUG00000002186	RBM28	58	57.522	Myotis_lucifugus
ENSOMEG00000007801	rbm28	100	51.886	ENSNGAG00000006480	-	59	56.332	Nannospalax_galili
ENSOMEG00000007801	rbm28	100	50.255	ENSNGAG00000017946	-	58	55.654	Nannospalax_galili
ENSOMEG00000007801	rbm28	100	50.499	ENSNLEG00000012307	RBM28	77	67.500	Nomascus_leucogenys
ENSOMEG00000007801	rbm28	83	57.764	ENSMEUG00000009611	RBM28	83	59.877	Notamacropus_eugenii
ENSOMEG00000007801	rbm28	64	51.417	ENSODEG00000003213	-	57	52.747	Octodon_degus
ENSOMEG00000007801	rbm28	80	56.965	ENSODEG00000013217	-	83	58.000	Octodon_degus
ENSOMEG00000007801	rbm28	100	67.358	ENSONIG00000014924	rbm28	59	75.604	Oreochromis_niloticus
ENSOMEG00000007801	rbm28	100	47.355	ENSOANG00000000815	-	59	50.000	Ornithorhynchus_anatinus
ENSOMEG00000007801	rbm28	66	54.241	ENSOCUG00000003009	RBM28	57	57.174	Oryctolagus_cuniculus
ENSOMEG00000007801	rbm28	99	84.314	ENSORLG00000009636	rbm28	59	88.053	Oryzias_latipes
ENSOMEG00000007801	rbm28	60	88.106	ENSORLG00020002123	rbm28	61	88.053	Oryzias_latipes_hni
ENSOMEG00000007801	rbm28	86	88.780	ENSORLG00015015030	rbm28	98	88.780	Oryzias_latipes_hsok
ENSOMEG00000007801	rbm28	71	65.000	ENSOGAG00000006011	RBM28	76	65.000	Otolemur_garnettii
ENSOMEG00000007801	rbm28	100	52.302	ENSOARG00000002547	RBM28	59	57.837	Ovis_aries
ENSOMEG00000007801	rbm28	70	67.500	ENSPPAG00000041730	RBM28	77	67.500	Pan_paniscus
ENSOMEG00000007801	rbm28	100	52.174	ENSPPRG00000004420	RBM28	79	67.500	Panthera_pardus
ENSOMEG00000007801	rbm28	100	52.235	ENSPTIG00000008550	RBM28	79	67.500	Panthera_tigris_altaica
ENSOMEG00000007801	rbm28	70	67.500	ENSPTRG00000019659	RBM28	77	67.500	Pan_troglodytes
ENSOMEG00000007801	rbm28	100	50.500	ENSPANG00000022295	RBM28	77	67.500	Papio_anubis
ENSOMEG00000007801	rbm28	99	56.516	ENSPKIG00000023453	rbm28	62	57.084	Paramormyrops_kingsleyae
ENSOMEG00000007801	rbm28	85	69.484	ENSPMGG00000012840	rbm28	100	58.785	Periophthalmus_magnuspinnatus
ENSOMEG00000007801	rbm28	95	52.533	ENSPCIG00000012810	RBM28	59	54.881	Phascolarctos_cinereus
ENSOMEG00000007801	rbm28	60	72.848	ENSPFOG00000018209	rbm28	59	72.848	Poecilia_formosa
ENSOMEG00000007801	rbm28	59	72.260	ENSPLAG00000016078	rbm28	56	72.260	Poecilia_latipinna
ENSOMEG00000007801	rbm28	60	72.406	ENSPMEG00000004292	rbm28	59	72.406	Poecilia_mexicana
ENSOMEG00000007801	rbm28	57	73.645	ENSPREG00000014287	rbm28	74	71.938	Poecilia_reticulata
ENSOMEG00000007801	rbm28	100	50.251	ENSPPYG00000017975	RBM28	58	57.301	Pongo_abelii
ENSOMEG00000007801	rbm28	78	53.056	ENSPCAG00000008223	RBM28	83	52.861	Procavia_capensis
ENSOMEG00000007801	rbm28	71	67.500	ENSPCOG00000016797	RBM28	76	67.500	Propithecus_coquereli
ENSOMEG00000007801	rbm28	77	64.815	ENSPVAG00000005443	RBM28	73	66.667	Pteropus_vampyrus
ENSOMEG00000007801	rbm28	100	71.018	ENSPNYG00000014003	rbm28	59	76.264	Pundamilia_nyererei
ENSOMEG00000007801	rbm28	100	51.499	ENSRNOG00000005468	Rbm28	58	56.291	Rattus_norvegicus
ENSOMEG00000007801	rbm28	70	67.500	ENSRBIG00000033990	RBM28	77	67.500	Rhinopithecus_bieti
ENSOMEG00000007801	rbm28	70	67.500	ENSRROG00000040747	RBM28	77	67.500	Rhinopithecus_roxellana
ENSOMEG00000007801	rbm28	85	45.074	ENSSBOG00000012308	RBM28	74	57.870	Saimiri_boliviensis_boliviensis
ENSOMEG00000007801	rbm28	96	49.664	ENSSHAG00000017017	RBM28	60	56.335	Sarcophilus_harrisii
ENSOMEG00000007801	rbm28	100	54.796	ENSSFOG00015001231	rbm28	60	61.319	Scleropages_formosus
ENSOMEG00000007801	rbm28	60	67.615	ENSSMAG00000003885	rbm28	90	67.692	Scophthalmus_maximus
ENSOMEG00000007801	rbm28	60	76.264	ENSSDUG00000014270	rbm28	88	76.211	Seriola_dumerili
ENSOMEG00000007801	rbm28	60	75.771	ENSSLDG00000020099	rbm28	59	75.771	Seriola_lalandi_dorsalis
ENSOMEG00000007801	rbm28	77	61.558	ENSSARG00000008303	RBM28	80	60.827	Sorex_araneus
ENSOMEG00000007801	rbm28	68	61.765	ENSSPUG00000000838	RBM28	80	61.765	Sphenodon_punctatus
ENSOMEG00000007801	rbm28	59	73.767	ENSSPAG00000023305	rbm28	62	74.670	Stegastes_partitus
ENSOMEG00000007801	rbm28	100	50.126	ENSSSCG00000031847	RBM28	59	57.802	Sus_scrofa
ENSOMEG00000007801	rbm28	100	62.148	ENSTRUG00000013311	rbm28	58	67.904	Takifugu_rubripes
ENSOMEG00000007801	rbm28	99	60.982	ENSTNIG00000017962	rbm28	59	68.352	Tetraodon_nigroviridis
ENSOMEG00000007801	rbm28	73	56.832	ENSTBEG00000012749	RBM28	76	55.848	Tupaia_belangeri
ENSOMEG00000007801	rbm28	100	51.005	ENSTTRG00000013647	RBM28	89	57.860	Tursiops_truncatus
ENSOMEG00000007801	rbm28	100	50.712	ENSUAMG00000006949	RBM28	88	55.508	Ursus_americanus
ENSOMEG00000007801	rbm28	100	53.178	ENSUMAG00000005997	RBM28	58	57.965	Ursus_maritimus
ENSOMEG00000007801	rbm28	85	47.923	ENSVPAG00000008304	RBM28	79	51.885	Vicugna_pacos
ENSOMEG00000007801	rbm28	100	52.652	ENSVVUG00000007270	RBM28	58	56.923	Vulpes_vulpes
ENSOMEG00000007801	rbm28	66	49.609	ENSXETG00000009271	rbm28	59	51.188	Xenopus_tropicalis
ENSOMEG00000007801	rbm28	59	69.128	ENSXCOG00000020357	rbm28	91	69.128	Xiphophorus_couchianus
ENSOMEG00000007801	rbm28	59	72.912	ENSXMAG00000004415	rbm28	58	72.912	Xiphophorus_maculatus