EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSOMEG00000007824 (Gene tree)
Gene ID
112148299
Gene Symbol
smn1
Alias
-
Full Name
survival motor neuron protein 1-like
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Plus strand
Length
8332 bases
Position
chrNVQA01000012.1:11290809-11299140
Accession
112148299
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000006764SMNPF06003.122.8e-11011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000005251-2896-ENSOMEP00000006764283 (aa)XP_024131058UPI000CF80544
Gene Model
Click here to download ENSOMEG00000007824's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000007824's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000007824smn19452.708ENSG00000172062SMN19252.399Homo_sapiens
ENSOMEG00000007824smn19452.708ENSG00000205571SMN29252.399Homo_sapiens
ENSOMEG00000007824smn110080.919ENSAPOG00000011324smn110080.919Acanthochromis_polyacanthus
ENSOMEG00000007824smn19452.465ENSAMEG00000003316-8953.261Ailuropoda_melanoleuca
ENSOMEG00000007824smn15974.405ENSACIG00000007598smn19275.595Amphilophus_citrinellus
ENSOMEG00000007824smn19373.764ENSACIG00000019772-9973.764Amphilophus_citrinellus
ENSOMEG00000007824smn110080.212ENSAOCG00000024444smn110080.212Amphiprion_ocellaris
ENSOMEG00000007824smn110080.565ENSAPEG00000016504smn110080.565Amphiprion_percula
ENSOMEG00000007824smn19580.000ENSATEG00000002182smn18280.000Anabas_testudineus
ENSOMEG00000007824smn16950.990ENSAPLG00000010912-9646.269Anas_platyrhynchos
ENSOMEG00000007824smn19852.817ENSACAG00000010017-9653.497Anolis_carolinensis
ENSOMEG00000007824smn19439.483ENSANAG00000032133-5161.589Aotus_nancymaae
ENSOMEG00000007824smn19977.385ENSACLG00000007308smn19476.678Astatotilapia_calliptera
ENSOMEG00000007824smn110063.732ENSAMXG00000013884smn110064.437Astyanax_mexicanus
ENSOMEG00000007824smn19453.846ENSBTAG00000005743SMN29348.519Bos_taurus
ENSOMEG00000007824smn15462.420ENSCJAG00000016290-5862.914Callithrix_jacchus
ENSOMEG00000007824smn19454.380ENSCAFG00000007812SMN9353.986Canis_familiaris
ENSOMEG00000007824smn19454.579ENSCAFG00020019229-8653.986Canis_lupus_dingo
ENSOMEG00000007824smn19453.846ENSCHIG00000015559-9148.519Capra_hircus
ENSOMEG00000007824smn19452.574ENSTSYG00000012058-5962.914Carlito_syrichta
ENSOMEG00000007824smn19449.648ENSCPOG00000036973-9250.355Cavia_porcellus
ENSOMEG00000007824smn19449.135ENSCPOG00000012328-9349.296Cavia_porcellus
ENSOMEG00000007824smn15461.146ENSCCAG00000018127-5861.589Cebus_capucinus
ENSOMEG00000007824smn19452.399ENSCATG00000037002-9251.866Cercocebus_atys
ENSOMEG00000007824smn19452.347ENSCLAG00000000284-5860.897Chinchilla_lanigera
ENSOMEG00000007824smn19453.091ENSCSAG00000015688-9152.347Chlorocebus_sabaeus
ENSOMEG00000007824smn15158.784ENSCHOG00000007346-10048.617Choloepus_hoffmanni
ENSOMEG00000007824smn19649.648ENSCPBG00000010968-9952.555Chrysemys_picta_bellii
ENSOMEG00000007824smn19251.481ENSCANG00000033324-8951.481Colobus_angolensis_palliatus
ENSOMEG00000007824smn19452.414ENSCANG00000038242-5862.914Colobus_angolensis_palliatus
ENSOMEG00000007824smn19441.791ENSCGRG00001016998-9139.338Cricetulus_griseus_chok1gshd
ENSOMEG00000007824smn19454.444ENSCGRG00001017959-9349.813Cricetulus_griseus_chok1gshd
ENSOMEG00000007824smn19454.444ENSCGRG00000007698Smn19349.813Cricetulus_griseus_crigri
ENSOMEG00000007824smn19764.789ENSCSEG00000015227smn19963.830Cynoglossus_semilaevis
ENSOMEG00000007824smn110078.873ENSCVAG00000007498smn110077.465Cyprinodon_variegatus
ENSOMEG00000007824smn110063.194ENSDARG00000018494smn110058.596Danio_rerio
ENSOMEG00000007824smn15453.247ENSDNOG00000045949-6253.691Dasypus_novemcinctus
ENSOMEG00000007824smn19344.891ENSDORG00000007082Smn15245.455Dipodomys_ordii
ENSOMEG00000007824smn15849.405ENSETEG00000001406-8647.778Echinops_telfairi
ENSOMEG00000007824smn19638.095ENSEBUG00000011902smn15142.568Eptatretus_burgeri
ENSOMEG00000007824smn18948.047ENSEASG00005018000-9042.379Equus_asinus_asinus
ENSOMEG00000007824smn19452.206ENSECAG00000015215-9347.183Equus_caballus
ENSOMEG00000007824smn18851.724ENSEEUG00000015777-10049.618Erinaceus_europaeus
ENSOMEG00000007824smn110066.784ENSELUG00000018067smn110062.898Esox_lucius
ENSOMEG00000007824smn19453.261ENSFCAG00000028292SMN5863.576Felis_catus
ENSOMEG00000007824smn19553.261ENSFALG00000012320-9549.632Ficedula_albicollis
ENSOMEG00000007824smn19449.270ENSFDAG00000017683-5553.086Fukomys_damarensis
ENSOMEG00000007824smn19779.348ENSFHEG00000018508smn110079.348Fundulus_heteroclitus
ENSOMEG00000007824smn110065.724ENSGMOG00000017279smn19857.951Gadus_morhua
ENSOMEG00000007824smn19555.351ENSGALG00000002430SMN5559.732Gallus_gallus
ENSOMEG00000007824smn110081.272ENSGAFG00000009501smn110081.272Gambusia_affinis
ENSOMEG00000007824smn110078.521ENSGACG00000010584smn19778.169Gasterosteus_aculeatus
ENSOMEG00000007824smn15659.756ENSGAGG00000011374-5560.526Gopherus_agassizii
ENSOMEG00000007824smn19736.567ENSGAGG00000013639-6741.000Gopherus_agassizii
ENSOMEG00000007824smn19149.810ENSGGOG00000003872-6162.252Gorilla_gorilla
ENSOMEG00000007824smn15461.783ENSGGOG00000026704-7162.252Gorilla_gorilla
ENSOMEG00000007824smn110079.505ENSHBUG00000013987smn110078.799Haplochromis_burtoni
ENSOMEG00000007824smn19451.449ENSHGLG00000001018-6051.381Heterocephalus_glaber_female
ENSOMEG00000007824smn19448.175ENSHGLG00000001905-9445.985Heterocephalus_glaber_female
ENSOMEG00000007824smn19248.134ENSHGLG00100018676-9645.896Heterocephalus_glaber_male
ENSOMEG00000007824smn19451.449ENSHGLG00100011252-6051.381Heterocephalus_glaber_male
ENSOMEG00000007824smn19473.962ENSHCOG00000017136smn18974.340Hippocampus_comes
ENSOMEG00000007824smn110064.336ENSIPUG00000012580smn18960.351Ictalurus_punctatus
ENSOMEG00000007824smn19151.282ENSSTOG00000012288-9350.189Ictidomys_tridecemlineatus
ENSOMEG00000007824smn15051.748ENSJJAG00000014853-7749.351Jaculus_jaculus
ENSOMEG00000007824smn110076.923ENSKMAG00000007239smn110076.224Kryptolebias_marmoratus
ENSOMEG00000007824smn110080.986ENSLBEG00000022550smn110080.986Labrus_bergylta
ENSOMEG00000007824smn19735.034ENSLACG00000009808-9234.752Latimeria_chalumnae
ENSOMEG00000007824smn110053.020ENSLOCG00000011339smn110054.355Lepisosteus_oculatus
ENSOMEG00000007824smn19451.087ENSLAFG00000003425-5158.710Loxodonta_africana
ENSOMEG00000007824smn19449.632ENSMFAG00000008812-5159.603Macaca_fascicularis
ENSOMEG00000007824smn19453.455ENSMFAG00000031523SMN19551.301Macaca_fascicularis
ENSOMEG00000007824smn19453.455ENSMMUG00000020214SMN19252.985Macaca_mulatta
ENSOMEG00000007824smn19448.897ENSMMUG00000030594-5158.278Macaca_mulatta
ENSOMEG00000007824smn17740.090ENSMNEG00000036423-7039.444Macaca_nemestrina
ENSOMEG00000007824smn19453.455ENSMNEG00000035094-9252.985Macaca_nemestrina
ENSOMEG00000007824smn19453.455ENSMLEG00000041902-9352.985Mandrillus_leucophaeus
ENSOMEG00000007824smn110079.225ENSMAMG00000011034smn110079.225Mastacembelus_armatus
ENSOMEG00000007824smn110079.859ENSMZEG00005013634smn110079.152Maylandia_zebra
ENSOMEG00000007824smn19450.186ENSMAUG00000010262Smn19348.689Mesocricetus_auratus
ENSOMEG00000007824smn15461.146ENSMICG00000034708-6861.589Microcebus_murinus
ENSOMEG00000007824smn19455.019ENSMOCG00000017833Smn19349.813Microtus_ochrogaster
ENSOMEG00000007824smn19661.538ENSMMOG00000005504smn19767.897Mola_mola
ENSOMEG00000007824smn19454.380ENSMODG00000001436-5160.135Monodelphis_domestica
ENSOMEG00000007824smn110080.634ENSMALG00000008025smn110080.634Monopterus_albus
ENSOMEG00000007824smn19454.815MGP_CAROLIEiJ_G0018836Smn19353.358Mus_caroli
ENSOMEG00000007824smn19454.444ENSMUSG00000021645Smn19352.985Mus_musculus
ENSOMEG00000007824smn19455.185MGP_PahariEiJ_G0015911Smn19353.731Mus_pahari
ENSOMEG00000007824smn19454.074MGP_SPRETEiJ_G0019718Smn19352.612Mus_spretus
ENSOMEG00000007824smn19252.256ENSMPUG00000014470-9352.593Mustela_putorius_furo
ENSOMEG00000007824smn19452.920ENSNGAG00000019833Smn19348.736Nannospalax_galili
ENSOMEG00000007824smn110081.272ENSNBRG00000023000smn110081.272Neolamprologus_brichardi
ENSOMEG00000007824smn19452.878ENSNLEG00000004454-9252.768Nomascus_leucogenys
ENSOMEG00000007824smn16650.777ENSMEUG00000011393-8847.761Notamacropus_eugenii
ENSOMEG00000007824smn18851.724ENSOPRG00000002015-10052.756Ochotona_princeps
ENSOMEG00000007824smn19149.434ENSODEG00000015976-9149.071Octodon_degus
ENSOMEG00000007824smn110079.859ENSONIG00000011799smn110079.859Oreochromis_niloticus
ENSOMEG00000007824smn19553.455ENSOANG00000001626-9546.619Ornithorhynchus_anatinus
ENSOMEG00000007824smn19443.273ENSOCUG00000025183-9240.727Oryctolagus_cuniculus
ENSOMEG00000007824smn19452.574ENSOCUG00000017097-9253.261Oryctolagus_cuniculus
ENSOMEG00000007824smn19452.347ENSOCUG00000026649-9252.837Oryctolagus_cuniculus
ENSOMEG00000007824smn110090.459ENSORLG00000010552smn110090.459Oryzias_latipes
ENSOMEG00000007824smn110081.338ENSORLG00020007936smn110081.338Oryzias_latipes_hni
ENSOMEG00000007824smn110090.813ENSORLG00015022425smn110090.813Oryzias_latipes_hsok
ENSOMEG00000007824smn19147.368ENSOGAG00000031414-9246.840Otolemur_garnettii
ENSOMEG00000007824smn19449.265ENSOARG00000005425-9747.212Ovis_aries
ENSOMEG00000007824smn19452.708ENSPPAG00000036640-9252.399Pan_paniscus
ENSOMEG00000007824smn19454.015ENSPPRG00000005575-5863.576Panthera_pardus
ENSOMEG00000007824smn19453.261ENSPTIG00000007745-9354.317Panthera_tigris_altaica
ENSOMEG00000007824smn19452.143ENSPTRG00000016955-9247.143Pan_troglodytes
ENSOMEG00000007824smn19450.000ENSPANG00000000253-5659.603Papio_anubis
ENSOMEG00000007824smn19453.261ENSPANG00000013601-9152.708Papio_anubis
ENSOMEG00000007824smn110059.298ENSPKIG00000011096smn110059.649Paramormyrops_kingsleyae
ENSOMEG00000007824smn110066.551ENSPMGG00000012285smn19770.522Periophthalmus_magnuspinnatus
ENSOMEG00000007824smn19240.511ENSPMAG00000005004smn19138.376Petromyzon_marinus
ENSOMEG00000007824smn19454.212ENSPCIG00000025764-5259.184Phascolarctos_cinereus
ENSOMEG00000007824smn110080.919ENSPFOG00000007786smn110080.919Poecilia_formosa
ENSOMEG00000007824smn110081.272ENSPLAG00000012071smn110081.272Poecilia_latipinna
ENSOMEG00000007824smn110080.919ENSPMEG00000017085smn110080.919Poecilia_mexicana
ENSOMEG00000007824smn110080.565ENSPREG00000005824smn110080.565Poecilia_reticulata
ENSOMEG00000007824smn15250.327ENSPPYG00000019189-7247.552Pongo_abelii
ENSOMEG00000007824smn19251.481ENSPPYG00000015533-9551.103Pongo_abelii
ENSOMEG00000007824smn19151.119ENSPCAG00000004187-5457.534Procavia_capensis
ENSOMEG00000007824smn16350.829ENSPCOG00000022307-6259.124Propithecus_coquereli
ENSOMEG00000007824smn19453.137ENSPVAG00000005977-9252.920Pteropus_vampyrus
ENSOMEG00000007824smn110081.272ENSPNYG00000014148smn110081.272Pundamilia_nyererei
ENSOMEG00000007824smn110063.158ENSPNAG00000014007smn18758.803Pygocentrus_nattereri
ENSOMEG00000007824smn19553.676ENSRNOG00000018067Smn19349.071Rattus_norvegicus
ENSOMEG00000007824smn19248.289ENSRBIG00000036775-5560.927Rhinopithecus_bieti
ENSOMEG00000007824smn19453.091ENSRBIG00000037052-9152.347Rhinopithecus_bieti
ENSOMEG00000007824smn19446.715ENSRROG00000031088-5663.448Rhinopithecus_roxellana
ENSOMEG00000007824smn19453.091ENSRROG00000039399-9252.612Rhinopithecus_roxellana
ENSOMEG00000007824smn15463.057ENSSBOG00000011665-5863.576Saimiri_boliviensis_boliviensis
ENSOMEG00000007824smn19454.579ENSSHAG00000001499-5556.757Sarcophilus_harrisii
ENSOMEG00000007824smn110063.636ENSSFOG00015015507smn110059.441Scleropages_formosus
ENSOMEG00000007824smn110074.912ENSSMAG00000007922smn110077.032Scophthalmus_maximus
ENSOMEG00000007824smn110081.690ENSSDUG00000018533smn110081.690Seriola_dumerili
ENSOMEG00000007824smn110082.042ENSSLDG00000021135smn110082.042Seriola_lalandi_dorsalis
ENSOMEG00000007824smn19655.197ENSSPUG00000000373-9950.842Sphenodon_punctatus
ENSOMEG00000007824smn110080.565ENSSPAG00000004345smn110080.565Stegastes_partitus
ENSOMEG00000007824smn19453.875ENSSSCG00000016970-9251.292Sus_scrofa
ENSOMEG00000007824smn15761.667ENSSSCG00000029127-6768.750Sus_scrofa
ENSOMEG00000007824smn19151.449ENSTGUG00000001548-9743.945Taeniopygia_guttata
ENSOMEG00000007824smn110067.138ENSTRUG00000000736smn10065.018Takifugu_rubripes
ENSOMEG00000007824smn110065.862ENSTNIG00000009892smn110065.517Tetraodon_nigroviridis
ENSOMEG00000007824smn15461.392ENSTBEG00000002399-7361.589Tupaia_belangeri
ENSOMEG00000007824smn16057.471ENSTTRG00000005080-9151.079Tursiops_truncatus
ENSOMEG00000007824smn15461.392ENSUAMG00000024947-5759.615Ursus_americanus
ENSOMEG00000007824smn16177.778ENSVPAG00000009887-6282.609Vicugna_pacos
ENSOMEG00000007824smn19454.380ENSVVUG00000006934-9353.986Vulpes_vulpes
ENSOMEG00000007824smn19556.318ENSXETG00000018189smn25360.645Xenopus_tropicalis
ENSOMEG00000007824smn15142.857ENSXETG00000004912-8161.404Xenopus_tropicalis
ENSOMEG00000007824smn110080.212ENSXMAG00000001521smn110080.212Xiphophorus_maculatus

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