EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000007873 (Gene tree)
Gene ID: 112138426
Gene Symbol: trnau1apa
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 5694 bases
Position: chrNVQA01000004.1:9813711-9819404
Accession: 112138426
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000026189	RRM_1	PF00076.22	1.7e-26	1	2
ENSOMEP00000026189	RRM_1	PF00076.22	1.7e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000005179	-	2078	-	ENSOMEP00000026189	305 (aa)	XP_024116747	UPI000CF83B47

Gene Model

Click here to download ENSOMEG00000007873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000007873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000007873	trnau1apa	63	53.646	ENSOMEG00000016531	trnau1apb	96	42.814
ENSOMEG00000007873	trnau1apa	56	30.435	ENSOMEG00000014410	pabpc4	60	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000007873	trnau1apa	95	56.164	ENSG00000180098	TRNAU1AP	98	59.044	Homo_sapiens
ENSOMEG00000007873	trnau1apa	100	81.494	ENSAPOG00000007148	TRNAU1AP	100	82.143	Acanthochromis_polyacanthus
ENSOMEG00000007873	trnau1apa	95	56.849	ENSAMEG00000011367	TRNAU1AP	98	57.877	Ailuropoda_melanoleuca
ENSOMEG00000007873	trnau1apa	91	94.382	ENSACIG00000004161	trnau1apa	93	94.382	Amphilophus_citrinellus
ENSOMEG00000007873	trnau1apa	100	81.433	ENSAOCG00000008056	trnau1apa	100	81.433	Amphiprion_ocellaris
ENSOMEG00000007873	trnau1apa	100	81.433	ENSAPEG00000008868	trnau1apa	100	81.433	Amphiprion_percula
ENSOMEG00000007873	trnau1apa	100	77.848	ENSATEG00000012140	trnau1apa	100	76.266	Anabas_testudineus
ENSOMEG00000007873	trnau1apa	92	56.940	ENSAPLG00000002606	TRNAU1AP	98	58.719	Anas_platyrhynchos
ENSOMEG00000007873	trnau1apa	71	36.073	ENSACAG00000004205	-	79	39.545	Anolis_carolinensis
ENSOMEG00000007873	trnau1apa	94	46.416	ENSACAG00000003995	-	97	49.492	Anolis_carolinensis
ENSOMEG00000007873	trnau1apa	95	56.164	ENSANAG00000018976	TRNAU1AP	98	59.044	Aotus_nancymaae
ENSOMEG00000007873	trnau1apa	100	82.736	ENSACLG00000018515	trnau1apa	100	82.736	Astatotilapia_calliptera
ENSOMEG00000007873	trnau1apa	94	68.889	ENSAMXG00000029240	-	97	68.889	Astyanax_mexicanus
ENSOMEG00000007873	trnau1apa	99	55.484	ENSAMXG00000013750	trnau1apa	97	55.484	Astyanax_mexicanus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSBTAG00000010393	TRNAU1AP	98	59.044	Bos_taurus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSCJAG00000009717	TRNAU1AP	98	59.044	Callithrix_jacchus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSCAFG00000011735	TRNAU1AP	98	59.044	Canis_familiaris
ENSOMEG00000007873	trnau1apa	95	56.164	ENSCAFG00020023584	TRNAU1AP	98	59.044	Canis_lupus_dingo
ENSOMEG00000007873	trnau1apa	95	56.164	ENSCHIG00000023215	TRNAU1AP	98	59.044	Capra_hircus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSTSYG00000003506	TRNAU1AP	98	59.044	Carlito_syrichta
ENSOMEG00000007873	trnau1apa	95	56.164	ENSCPOG00000001925	TRNAU1AP	98	59.044	Cavia_porcellus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSCCAG00000037506	TRNAU1AP	98	59.044	Cebus_capucinus
ENSOMEG00000007873	trnau1apa	95	55.822	ENSCATG00000044617	TRNAU1AP	98	58.703	Cercocebus_atys
ENSOMEG00000007873	trnau1apa	95	56.164	ENSCLAG00000008223	TRNAU1AP	98	59.044	Chinchilla_lanigera
ENSOMEG00000007873	trnau1apa	95	55.822	ENSCSAG00000001014	TRNAU1AP	98	58.703	Chlorocebus_sabaeus
ENSOMEG00000007873	trnau1apa	92	54.930	ENSCPBG00000000121	TRNAU1AP	98	58.099	Chrysemys_picta_bellii
ENSOMEG00000007873	trnau1apa	52	50.625	ENSCSAVG00000011781	-	84	50.625	Ciona_savignyi
ENSOMEG00000007873	trnau1apa	95	47.945	ENSCANG00000041949	TRNAU1AP	97	54.054	Colobus_angolensis_palliatus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSCGRG00001004713	Trnau1ap	98	59.044	Cricetulus_griseus_chok1gshd
ENSOMEG00000007873	trnau1apa	95	56.164	ENSCGRG00000014532	Trnau1ap	98	59.044	Cricetulus_griseus_crigri
ENSOMEG00000007873	trnau1apa	100	87.407	ENSCSEG00000006663	trnau1apa	100	73.482	Cynoglossus_semilaevis
ENSOMEG00000007873	trnau1apa	99	82.026	ENSCVAG00000018069	trnau1apa	99	83.987	Cyprinodon_variegatus
ENSOMEG00000007873	trnau1apa	99	50.325	ENSDARG00000101323	trnau1apa	95	49.026	Danio_rerio
ENSOMEG00000007873	trnau1apa	57	59.195	ENSDNOG00000047959	-	90	59.195	Dasypus_novemcinctus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSDNOG00000033009	TRNAU1AP	98	59.044	Dasypus_novemcinctus
ENSOMEG00000007873	trnau1apa	95	53.793	ENSDORG00000006349	Trnau1ap	97	62.712	Dipodomys_ordii
ENSOMEG00000007873	trnau1apa	90	35.556	FBgn0031607	CG15440	50	47.305	Drosophila_melanogaster
ENSOMEG00000007873	trnau1apa	81	53.815	ENSETEG00000012594	TRNAU1AP	97	57.200	Echinops_telfairi
ENSOMEG00000007873	trnau1apa	95	56.164	ENSEASG00005010062	TRNAU1AP	90	67.123	Equus_asinus_asinus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSECAG00000012980	TRNAU1AP	90	67.123	Equus_caballus
ENSOMEG00000007873	trnau1apa	100	67.097	ENSELUG00000017686	trnau1apa	100	66.881	Esox_lucius
ENSOMEG00000007873	trnau1apa	91	79.545	ENSELUG00000022790	-	93	79.545	Esox_lucius
ENSOMEG00000007873	trnau1apa	95	56.164	ENSFCAG00000013401	TRNAU1AP	98	59.044	Felis_catus
ENSOMEG00000007873	trnau1apa	92	55.516	ENSFALG00000001371	TRNAU1AP	98	58.363	Ficedula_albicollis
ENSOMEG00000007873	trnau1apa	95	56.164	ENSFDAG00000018599	TRNAU1AP	98	59.044	Fukomys_damarensis
ENSOMEG00000007873	trnau1apa	78	85.714	ENSFHEG00000018232	trnau1apa	82	85.714	Fundulus_heteroclitus
ENSOMEG00000007873	trnau1apa	100	60.714	ENSGMOG00000016508	trnau1apa	99	62.783	Gadus_morhua
ENSOMEG00000007873	trnau1apa	95	55.479	ENSGALG00000001310	-	98	57.877	Gallus_gallus
ENSOMEG00000007873	trnau1apa	70	34.703	ENSGALG00000012721	C2H6orf52	90	37.066	Gallus_gallus
ENSOMEG00000007873	trnau1apa	79	90.612	ENSGAFG00000004928	trnau1apa	91	91.250	Gambusia_affinis
ENSOMEG00000007873	trnau1apa	100	80.130	ENSGACG00000001443	trnau1apa	100	79.153	Gasterosteus_aculeatus
ENSOMEG00000007873	trnau1apa	92	54.930	ENSGAGG00000004940	TRNAU1AP	98	58.596	Gopherus_agassizii
ENSOMEG00000007873	trnau1apa	95	56.164	ENSGGOG00000003511	TRNAU1AP	98	59.044	Gorilla_gorilla
ENSOMEG00000007873	trnau1apa	100	94.074	ENSHBUG00000002510	trnau1apa	100	81.090	Haplochromis_burtoni
ENSOMEG00000007873	trnau1apa	95	56.164	ENSHGLG00000010380	TRNAU1AP	98	59.044	Heterocephalus_glaber_female
ENSOMEG00000007873	trnau1apa	95	54.452	ENSHGLG00100012699	TRNAU1AP	98	57.338	Heterocephalus_glaber_male
ENSOMEG00000007873	trnau1apa	99	73.955	ENSHCOG00000014770	trnau1apa	99	73.633	Hippocampus_comes
ENSOMEG00000007873	trnau1apa	95	56.164	ENSSTOG00000000079	TRNAU1AP	98	59.044	Ictidomys_tridecemlineatus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSJJAG00000010128	Trnau1ap	98	59.044	Jaculus_jaculus
ENSOMEG00000007873	trnau1apa	100	83.117	ENSKMAG00000001230	trnau1apa	100	84.740	Kryptolebias_marmoratus
ENSOMEG00000007873	trnau1apa	100	76.266	ENSLBEG00000011683	trnau1apa	100	76.582	Labrus_bergylta
ENSOMEG00000007873	trnau1apa	94	51.042	ENSLACG00000005541	TRNAU1AP	96	52.083	Latimeria_chalumnae
ENSOMEG00000007873	trnau1apa	94	59.028	ENSLOCG00000004041	trnau1apa	97	59.028	Lepisosteus_oculatus
ENSOMEG00000007873	trnau1apa	95	56.507	ENSLAFG00000007628	TRNAU1AP	98	59.386	Loxodonta_africana
ENSOMEG00000007873	trnau1apa	95	55.822	ENSMFAG00000043751	TRNAU1AP	98	58.703	Macaca_fascicularis
ENSOMEG00000007873	trnau1apa	95	55.822	ENSMMUG00000006561	TRNAU1AP	98	58.703	Macaca_mulatta
ENSOMEG00000007873	trnau1apa	95	55.822	ENSMNEG00000044201	TRNAU1AP	98	58.703	Macaca_nemestrina
ENSOMEG00000007873	trnau1apa	95	55.822	ENSMLEG00000015649	TRNAU1AP	98	58.703	Mandrillus_leucophaeus
ENSOMEG00000007873	trnau1apa	99	77.885	ENSMAMG00000001247	trnau1apa	100	77.244	Mastacembelus_armatus
ENSOMEG00000007873	trnau1apa	100	82.736	ENSMZEG00005017722	trnau1apa	100	82.736	Maylandia_zebra
ENSOMEG00000007873	trnau1apa	93	55.439	ENSMGAG00000002105	TRNAU1AP	98	57.895	Meleagris_gallopavo
ENSOMEG00000007873	trnau1apa	95	56.164	ENSMICG00000008386	TRNAU1AP	98	59.044	Microcebus_murinus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSMOCG00000011189	Trnau1ap	98	59.044	Microtus_ochrogaster
ENSOMEG00000007873	trnau1apa	100	68.167	ENSMMOG00000012107	trnau1apa	99	70.227	Mola_mola
ENSOMEG00000007873	trnau1apa	95	56.507	ENSMODG00000010927	TRNAU1AP	98	57.338	Monodelphis_domestica
ENSOMEG00000007873	trnau1apa	100	78.457	ENSMALG00000016778	trnau1apa	100	78.135	Monopterus_albus
ENSOMEG00000007873	trnau1apa	95	55.822	MGP_CAROLIEiJ_G0026563	Trnau1ap	97	67.816	Mus_caroli
ENSOMEG00000007873	trnau1apa	95	55.822	ENSMUSG00000028898	Trnau1ap	97	67.816	Mus_musculus
ENSOMEG00000007873	trnau1apa	95	55.822	MGP_PahariEiJ_G0028896	Trnau1ap	97	67.816	Mus_pahari
ENSOMEG00000007873	trnau1apa	95	55.822	MGP_SPRETEiJ_G0027544	Trnau1ap	97	67.816	Mus_spretus
ENSOMEG00000007873	trnau1apa	95	56.507	ENSMPUG00000015511	TRNAU1AP	98	59.386	Mustela_putorius_furo
ENSOMEG00000007873	trnau1apa	95	56.164	ENSMLUG00000012586	TRNAU1AP	98	59.044	Myotis_lucifugus
ENSOMEG00000007873	trnau1apa	95	55.822	ENSNGAG00000015881	Trnau1ap	98	58.844	Nannospalax_galili
ENSOMEG00000007873	trnau1apa	100	68.710	ENSNBRG00000001758	trnau1apa	99	69.032	Neolamprologus_brichardi
ENSOMEG00000007873	trnau1apa	95	56.164	ENSNLEG00000009822	TRNAU1AP	98	59.044	Nomascus_leucogenys
ENSOMEG00000007873	trnau1apa	93	56.140	ENSMEUG00000006117	TRNAU1AP	98	56.993	Notamacropus_eugenii
ENSOMEG00000007873	trnau1apa	55	62.069	ENSOPRG00000007084	-	62	62.069	Ochotona_princeps
ENSOMEG00000007873	trnau1apa	95	56.164	ENSODEG00000002970	TRNAU1AP	98	59.044	Octodon_degus
ENSOMEG00000007873	trnau1apa	80	85.772	ENSONIG00000004715	trnau1apa	91	87.069	Oreochromis_niloticus
ENSOMEG00000007873	trnau1apa	94	43.750	ENSOANG00000005325	-	96	45.548	Ornithorhynchus_anatinus
ENSOMEG00000007873	trnau1apa	95	54.795	ENSOCUG00000011704	-	98	57.679	Oryctolagus_cuniculus
ENSOMEG00000007873	trnau1apa	95	47.782	ENSOCUG00000002353	-	98	47.782	Oryctolagus_cuniculus
ENSOMEG00000007873	trnau1apa	85	48.462	ENSOCUG00000006834	-	89	50.209	Oryctolagus_cuniculus
ENSOMEG00000007873	trnau1apa	100	96.066	ENSORLG00000010428	trnau1apa	100	96.066	Oryzias_latipes
ENSOMEG00000007873	trnau1apa	100	96.066	ENSORLG00020000926	trnau1ap	100	96.066	Oryzias_latipes_hni
ENSOMEG00000007873	trnau1apa	100	96.066	ENSORLG00015009858	trnau1ap	100	96.066	Oryzias_latipes_hsok
ENSOMEG00000007873	trnau1apa	95	56.164	ENSOGAG00000002274	TRNAU1AP	98	59.044	Otolemur_garnettii
ENSOMEG00000007873	trnau1apa	95	56.164	ENSOARG00000002843	TRNAU1AP	98	59.044	Ovis_aries
ENSOMEG00000007873	trnau1apa	95	56.164	ENSPPAG00000033927	TRNAU1AP	98	59.044	Pan_paniscus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSPPRG00000004416	TRNAU1AP	98	59.044	Panthera_pardus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSPTIG00000016677	TRNAU1AP	98	59.044	Panthera_tigris_altaica
ENSOMEG00000007873	trnau1apa	88	49.446	ENSPTRG00000000434	-	93	51.673	Pan_troglodytes
ENSOMEG00000007873	trnau1apa	95	55.822	ENSPANG00000016019	TRNAU1AP	98	58.703	Papio_anubis
ENSOMEG00000007873	trnau1apa	92	79.545	ENSPKIG00000022205	-	95	79.545	Paramormyrops_kingsleyae
ENSOMEG00000007873	trnau1apa	97	57.807	ENSPKIG00000015511	trnau1apa	96	57.143	Paramormyrops_kingsleyae
ENSOMEG00000007873	trnau1apa	92	56.338	ENSPSIG00000006864	TRNAU1AP	98	58.596	Pelodiscus_sinensis
ENSOMEG00000007873	trnau1apa	97	69.231	ENSPMGG00000023893	trnau1apa	96	68.896	Periophthalmus_magnuspinnatus
ENSOMEG00000007873	trnau1apa	95	55.822	ENSPEMG00000007877	Trnau1ap	98	58.703	Peromyscus_maniculatus_bairdii
ENSOMEG00000007873	trnau1apa	74	54.867	ENSPMAG00000005934	trnau1apa	96	54.867	Petromyzon_marinus
ENSOMEG00000007873	trnau1apa	55	53.757	ENSPMAG00000000592	trnau1apa	95	53.757	Petromyzon_marinus
ENSOMEG00000007873	trnau1apa	99	82.680	ENSPFOG00000008100	trnau1apa	99	82.680	Poecilia_formosa
ENSOMEG00000007873	trnau1apa	95	82.653	ENSPLAG00000010236	trnau1apa	99	82.653	Poecilia_latipinna
ENSOMEG00000007873	trnau1apa	99	80.656	ENSPMEG00000016387	trnau1apa	97	80.656	Poecilia_mexicana
ENSOMEG00000007873	trnau1apa	88	86.957	ENSPREG00000019821	trnau1apa	98	86.957	Poecilia_reticulata
ENSOMEG00000007873	trnau1apa	86	47.925	ENSPPYG00000001639	-	98	51.128	Pongo_abelii
ENSOMEG00000007873	trnau1apa	95	56.164	ENSPCOG00000027712	-	98	59.044	Propithecus_coquereli
ENSOMEG00000007873	trnau1apa	95	56.164	ENSPVAG00000017214	TRNAU1AP	98	59.044	Pteropus_vampyrus
ENSOMEG00000007873	trnau1apa	100	82.963	ENSPNYG00000010130	trnau1apa	100	81.410	Pundamilia_nyererei
ENSOMEG00000007873	trnau1apa	99	54.045	ENSPNAG00000024905	trnau1apa	97	52.427	Pygocentrus_nattereri
ENSOMEG00000007873	trnau1apa	82	57.600	ENSRNOG00000055344	Trnau1ap	77	62.288	Rattus_norvegicus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSRBIG00000029083	TRNAU1AP	98	59.044	Rhinopithecus_bieti
ENSOMEG00000007873	trnau1apa	95	56.164	ENSRROG00000029128	TRNAU1AP	98	59.044	Rhinopithecus_roxellana
ENSOMEG00000007873	trnau1apa	95	56.164	ENSSBOG00000021299	TRNAU1AP	98	59.044	Saimiri_boliviensis_boliviensis
ENSOMEG00000007873	trnau1apa	95	56.164	ENSSHAG00000008108	TRNAU1AP	98	56.997	Sarcophilus_harrisii
ENSOMEG00000007873	trnau1apa	100	76.527	ENSSMAG00000020851	trnau1apa	100	77.492	Scophthalmus_maximus
ENSOMEG00000007873	trnau1apa	100	79.808	ENSSDUG00000011734	trnau1apa	100	80.449	Seriola_dumerili
ENSOMEG00000007873	trnau1apa	100	65.472	ENSSLDG00000012101	trnau1apa	99	64.821	Seriola_lalandi_dorsalis
ENSOMEG00000007873	trnau1apa	93	56.140	ENSSARG00000007536	TRNAU1AP	98	58.392	Sorex_araneus
ENSOMEG00000007873	trnau1apa	63	48.969	ENSSPUG00000010415	-	99	48.454	Sphenodon_punctatus
ENSOMEG00000007873	trnau1apa	95	53.041	ENSSPUG00000010400	-	98	54.949	Sphenodon_punctatus
ENSOMEG00000007873	trnau1apa	100	82.085	ENSSPAG00000005029	trnau1apa	100	82.085	Stegastes_partitus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSSSCG00000030284	TRNAU1AP	98	59.044	Sus_scrofa
ENSOMEG00000007873	trnau1apa	70	40.094	ENSTGUG00000005908	-	100	41.038	Taeniopygia_guttata
ENSOMEG00000007873	trnau1apa	93	55.789	ENSTGUG00000000735	-	98	57.544	Taeniopygia_guttata
ENSOMEG00000007873	trnau1apa	100	79.870	ENSTRUG00000003352	trnau1apa	100	78.571	Takifugu_rubripes
ENSOMEG00000007873	trnau1apa	100	75.484	ENSTNIG00000006129	trnau1apa	100	75.806	Tetraodon_nigroviridis
ENSOMEG00000007873	trnau1apa	81	51.417	ENSTBEG00000008049	-	96	53.036	Tupaia_belangeri
ENSOMEG00000007873	trnau1apa	95	56.164	ENSTTRG00000001854	TRNAU1AP	98	59.044	Tursiops_truncatus
ENSOMEG00000007873	trnau1apa	92	56.228	ENSUAMG00000008789	TRNAU1AP	98	59.220	Ursus_americanus
ENSOMEG00000007873	trnau1apa	95	56.164	ENSUMAG00000011068	TRNAU1AP	98	59.044	Ursus_maritimus
ENSOMEG00000007873	trnau1apa	96	48.684	ENSVPAG00000006778	TRNAU1AP	98	51.475	Vicugna_pacos
ENSOMEG00000007873	trnau1apa	95	55.517	ENSVVUG00000012518	TRNAU1AP	91	58.419	Vulpes_vulpes
ENSOMEG00000007873	trnau1apa	99	83.333	ENSXMAG00000017361	trnau1apa	99	83.333	Xiphophorus_maculatus