EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000008184 (Gene tree)
Gene ID: 112136827
Gene Symbol: zgc:171480
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 5405 bases
Position: chrNVQA01000035.1:5263144-5268548
Accession: 112136827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000026395	Mitoc_L55	PF09776.9	1.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000004675	-	2406	-	ENSOMEP00000026395	137 (aa)	XP_024114516	UPI000CF7F536

Gene Model

Click here to download ENSOMEG00000008184's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000008184's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000008184	zgc:171480	76	69.231	ENSAPOG00000002881	zgc:171480	72	69.231	Acanthochromis_polyacanthus
ENSOMEG00000008184	zgc:171480	76	69.231	ENSACIG00000001646	zgc:171480	76	69.231	Amphilophus_citrinellus
ENSOMEG00000008184	zgc:171480	76	71.154	ENSAOCG00000016155	zgc:171480	72	71.154	Amphiprion_ocellaris
ENSOMEG00000008184	zgc:171480	76	71.154	ENSAPEG00000022327	zgc:171480	72	71.154	Amphiprion_percula
ENSOMEG00000008184	zgc:171480	99	54.667	ENSATEG00000005625	zgc:171480	99	54.667	Anabas_testudineus
ENSOMEG00000008184	zgc:171480	73	54.455	ENSACAG00000006897	-	80	54.455	Anolis_carolinensis
ENSOMEG00000008184	zgc:171480	76	68.269	ENSACLG00000005172	zgc:171480	75	68.269	Astatotilapia_calliptera
ENSOMEG00000008184	zgc:171480	76	61.538	ENSAMXG00000043839	zgc:171480	79	61.538	Astyanax_mexicanus
ENSOMEG00000008184	zgc:171480	75	57.282	ENSCPBG00000001771	-	82	57.282	Chrysemys_picta_bellii
ENSOMEG00000008184	zgc:171480	81	58.036	ENSCSEG00000019533	zgc:171480	81	58.036	Cynoglossus_semilaevis
ENSOMEG00000008184	zgc:171480	84	53.913	ENSDARG00000043402	zgc:171480	80	53.913	Danio_rerio
ENSOMEG00000008184	zgc:171480	74	53.398	ENSELUG00000007716	zgc:171480	79	53.398	Esox_lucius
ENSOMEG00000008184	zgc:171480	66	47.253	ENSFALG00000001083	-	94	47.253	Ficedula_albicollis
ENSOMEG00000008184	zgc:171480	75	65.049	ENSFHEG00000000203	zgc:171480	81	62.832	Fundulus_heteroclitus
ENSOMEG00000008184	zgc:171480	73	68.000	ENSGMOG00000019009	zgc:171480	98	68.000	Gadus_morhua
ENSOMEG00000008184	zgc:171480	55	52.632	ENSGALG00000038820	-	91	45.192	Gallus_gallus
ENSOMEG00000008184	zgc:171480	86	63.025	ENSGAFG00000004832	-	83	63.025	Gambusia_affinis
ENSOMEG00000008184	zgc:171480	67	72.826	ENSGACG00000002136	zgc:171480	100	72.826	Gasterosteus_aculeatus
ENSOMEG00000008184	zgc:171480	75	54.369	ENSGAGG00000001806	-	83	54.369	Gopherus_agassizii
ENSOMEG00000008184	zgc:171480	76	68.269	ENSHBUG00000007895	zgc:171480	75	68.269	Haplochromis_burtoni
ENSOMEG00000008184	zgc:171480	77	63.810	ENSHCOG00000003526	zgc:171480	58	63.810	Hippocampus_comes
ENSOMEG00000008184	zgc:171480	83	53.913	ENSIPUG00000001273	mrpl55	81	53.913	Ictalurus_punctatus
ENSOMEG00000008184	zgc:171480	80	65.138	ENSKMAG00000002011	zgc:171480	86	65.138	Kryptolebias_marmoratus
ENSOMEG00000008184	zgc:171480	73	70.000	ENSLBEG00000010915	zgc:171480	79	70.000	Labrus_bergylta
ENSOMEG00000008184	zgc:171480	73	70.000	ENSLBEG00000016107	-	79	70.000	Labrus_bergylta
ENSOMEG00000008184	zgc:171480	75	55.769	ENSLACG00000016281	zgc:171480	79	55.769	Latimeria_chalumnae
ENSOMEG00000008184	zgc:171480	76	69.231	ENSMAMG00000022250	zgc:171480	71	69.231	Mastacembelus_armatus
ENSOMEG00000008184	zgc:171480	76	68.269	ENSMZEG00005015585	zgc:171480	75	68.269	Maylandia_zebra
ENSOMEG00000008184	zgc:171480	79	45.370	ENSMGAG00000002612	-	95	45.370	Meleagris_gallopavo
ENSOMEG00000008184	zgc:171480	87	48.739	ENSMMOG00000008740	-	92	48.739	Mola_mola
ENSOMEG00000008184	zgc:171480	100	52.555	ENSMALG00000019823	zgc:171480	100	52.555	Monopterus_albus
ENSOMEG00000008184	zgc:171480	76	66.346	ENSNBRG00000019447	zgc:171480	75	66.346	Neolamprologus_brichardi
ENSOMEG00000008184	zgc:171480	76	66.346	ENSONIG00000007645	zgc:171480	77	66.346	Oreochromis_niloticus
ENSOMEG00000008184	zgc:171480	100	84.058	ENSORLG00000026616	-	57	84.058	Oryzias_latipes
ENSOMEG00000008184	zgc:171480	91	81.452	ENSORLG00020006963	zgc:171480	91	81.452	Oryzias_latipes_hni
ENSOMEG00000008184	zgc:171480	91	82.258	ENSORLG00015003266	zgc:171480	91	82.258	Oryzias_latipes_hsok
ENSOMEG00000008184	zgc:171480	74	60.194	ENSPKIG00000006753	zgc:171480	80	60.194	Paramormyrops_kingsleyae
ENSOMEG00000008184	zgc:171480	91	48.387	ENSPSIG00000010893	-	89	48.387	Pelodiscus_sinensis
ENSOMEG00000008184	zgc:171480	76	62.857	ENSPMGG00000012657	-	81	62.857	Periophthalmus_magnuspinnatus
ENSOMEG00000008184	zgc:171480	68	44.211	ENSPMAG00000000867	zgc:171480	81	44.211	Petromyzon_marinus
ENSOMEG00000008184	zgc:171480	74	54.369	ENSPCIG00000021848	-	82	54.369	Phascolarctos_cinereus
ENSOMEG00000008184	zgc:171480	86	63.025	ENSPFOG00000012703	zgc:171480	85	63.025	Poecilia_formosa
ENSOMEG00000008184	zgc:171480	86	63.866	ENSPREG00000020328	zgc:171480	85	63.866	Poecilia_reticulata
ENSOMEG00000008184	zgc:171480	76	58.716	ENSPNAG00000017309	zgc:171480	80	58.716	Pygocentrus_nattereri
ENSOMEG00000008184	zgc:171480	72	63.000	ENSSFOG00015015668	mrpl55	76	63.000	Scleropages_formosus
ENSOMEG00000008184	zgc:171480	75	65.049	ENSSMAG00000005429	zgc:171480	74	65.049	Scophthalmus_maximus
ENSOMEG00000008184	zgc:171480	99	55.319	ENSSDUG00000022556	zgc:171480	96	55.319	Seriola_dumerili
ENSOMEG00000008184	zgc:171480	99	54.610	ENSSLDG00000019598	zgc:171480	96	54.610	Seriola_lalandi_dorsalis
ENSOMEG00000008184	zgc:171480	75	51.456	ENSSPUG00000000735	-	82	51.456	Sphenodon_punctatus
ENSOMEG00000008184	zgc:171480	76	71.154	ENSSPAG00000011598	zgc:171480	74	71.154	Stegastes_partitus
ENSOMEG00000008184	zgc:171480	72	67.677	ENSTRUG00000003082	zgc:171480	70	67.677	Takifugu_rubripes
ENSOMEG00000008184	zgc:171480	70	68.750	ENSXCOG00000005887	zgc:171480	79	68.750	Xiphophorus_couchianus
ENSOMEG00000008184	zgc:171480	90	60.800	ENSXMAG00000007937	zgc:171480	100	58.571	Xiphophorus_maculatus