EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000008200 (Gene tree)
Gene ID: 112147436
Gene Symbol: thoc1
Alias: -
Full Name: THO complex 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 5115 bases
Position: chrNVQA01000011.1:3576327-3581441
Accession: 112147436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000026388	efThoc1	PF11957.8	1.7e-142	1	1
ENSOMEP00000007086	efThoc1	PF11957.8	1.1e-59	1	3
ENSOMEP00000007086	efThoc1	PF11957.8	1.1e-59	2	3
ENSOMEP00000007086	efThoc1	PF11957.8	1.1e-59	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000004716	-	1374	-	ENSOMEP00000007086	457 (aa)	-	-
ENSOMET00000004664	-	2330	XM_024273828	ENSOMEP00000026388	652 (aa)	XP_024129596	UPI000CF7F32B

Gene Model

Click here to download ENSOMEG00000008200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000008200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000008200	thoc1	99	71.626	ENSG00000079134	THOC1	99	76.838	Homo_sapiens
ENSOMEG00000008200	thoc1	99	71.626	ENSAMEG00000006645	THOC1	98	70.859	Ailuropoda_melanoleuca
ENSOMEG00000008200	thoc1	94	89.088	ENSACIG00000019392	thoc1	95	89.251	Amphilophus_citrinellus
ENSOMEG00000008200	thoc1	100	86.391	ENSAOCG00000008391	thoc1	100	86.544	Amphiprion_ocellaris
ENSOMEG00000008200	thoc1	100	91.896	ENSAPEG00000001093	thoc1	100	92.049	Amphiprion_percula
ENSOMEG00000008200	thoc1	100	91.437	ENSATEG00000004783	thoc1	100	91.590	Anabas_testudineus
ENSOMEG00000008200	thoc1	99	70.642	ENSAPLG00000016149	THOC1	98	70.642	Anas_platyrhynchos
ENSOMEG00000008200	thoc1	99	71.081	ENSACAG00000008307	THOC1	97	70.472	Anolis_carolinensis
ENSOMEG00000008200	thoc1	99	71.017	ENSANAG00000033200	THOC1	98	70.258	Aotus_nancymaae
ENSOMEG00000008200	thoc1	100	90.826	ENSACLG00000016836	thoc1	100	90.979	Astatotilapia_calliptera
ENSOMEG00000008200	thoc1	94	76.115	ENSAMXG00000014708	thoc1	98	75.159	Astyanax_mexicanus
ENSOMEG00000008200	thoc1	99	71.779	ENSBTAG00000019215	THOC1	98	71.012	Bos_taurus
ENSOMEG00000008200	thoc1	69	36.443	WBGene00020172	thoc-1	69	35.897	Caenorhabditis_elegans
ENSOMEG00000008200	thoc1	89	82.051	ENSCJAG00000020450	THOC1	98	71.012	Callithrix_jacchus
ENSOMEG00000008200	thoc1	99	71.626	ENSCAFG00000018324	THOC1	98	70.859	Canis_familiaris
ENSOMEG00000008200	thoc1	99	71.626	ENSCAFG00020017894	THOC1	98	70.859	Canis_lupus_dingo
ENSOMEG00000008200	thoc1	99	71.779	ENSCHIG00000015399	THOC1	98	72.013	Capra_hircus
ENSOMEG00000008200	thoc1	99	71.472	ENSTSYG00000010585	THOC1	98	70.706	Carlito_syrichta
ENSOMEG00000008200	thoc1	97	51.166	ENSCAPG00000016270	THOC1	97	50.389	Cavia_aperea
ENSOMEG00000008200	thoc1	99	70.552	ENSCPOG00000000959	THOC1	98	69.785	Cavia_porcellus
ENSOMEG00000008200	thoc1	99	71.779	ENSCCAG00000025766	THOC1	98	71.012	Cebus_capucinus
ENSOMEG00000008200	thoc1	99	69.632	ENSCATG00000028180	THOC1	96	74.855	Cercocebus_atys
ENSOMEG00000008200	thoc1	97	72.170	ENSCLAG00000009117	THOC1	99	71.384	Chinchilla_lanigera
ENSOMEG00000008200	thoc1	99	71.779	ENSCSAG00000017631	THOC1	98	71.012	Chlorocebus_sabaeus
ENSOMEG00000008200	thoc1	79	76.151	ENSCHOG00000010609	THOC1	78	76.151	Choloepus_hoffmanni
ENSOMEG00000008200	thoc1	99	72.282	ENSCPBG00000027558	THOC1	99	72.282	Chrysemys_picta_bellii
ENSOMEG00000008200	thoc1	70	50.323	ENSCING00000007663	-	93	49.462	Ciona_intestinalis
ENSOMEG00000008200	thoc1	94	47.943	ENSCSAVG00000010649	-	99	47.452	Ciona_savignyi
ENSOMEG00000008200	thoc1	99	71.626	ENSCANG00000034265	THOC1	96	75.439	Colobus_angolensis_palliatus
ENSOMEG00000008200	thoc1	99	71.012	ENSCGRG00001016464	Thoc1	98	70.245	Cricetulus_griseus_chok1gshd
ENSOMEG00000008200	thoc1	98	71.719	ENSCGRG00000010269	-	99	71.226	Cricetulus_griseus_crigri
ENSOMEG00000008200	thoc1	90	58.703	ENSCGRG00000003390	-	97	58.532	Cricetulus_griseus_crigri
ENSOMEG00000008200	thoc1	99	86.626	ENSCSEG00000012486	thoc1	99	87.299	Cynoglossus_semilaevis
ENSOMEG00000008200	thoc1	100	89.450	ENSCVAG00000020600	thoc1	100	89.602	Cyprinodon_variegatus
ENSOMEG00000008200	thoc1	99	83.589	ENSDARG00000088246	thoc1	99	82.822	Danio_rerio
ENSOMEG00000008200	thoc1	99	71.429	ENSDNOG00000019217	THOC1	98	70.661	Dasypus_novemcinctus
ENSOMEG00000008200	thoc1	97	68.868	ENSDORG00000008060	Thoc1	98	68.139	Dipodomys_ordii
ENSOMEG00000008200	thoc1	81	42.545	FBgn0037382	Hpr1	74	42.391	Drosophila_melanogaster
ENSOMEG00000008200	thoc1	68	82.051	ENSETEG00000004165	THOC1	89	56.473	Echinops_telfairi
ENSOMEG00000008200	thoc1	92	63.245	ENSEBUG00000005998	thoc1	98	64.013	Eptatretus_burgeri
ENSOMEG00000008200	thoc1	99	71.472	ENSEASG00005002549	THOC1	94	71.231	Equus_asinus_asinus
ENSOMEG00000008200	thoc1	99	71.626	ENSECAG00000009267	THOC1	88	70.859	Equus_caballus
ENSOMEG00000008200	thoc1	61	84.615	ENSEEUG00000012214	-	81	56.028	Erinaceus_europaeus
ENSOMEG00000008200	thoc1	100	85.236	ENSELUG00000023277	thoc1	100	83.714	Esox_lucius
ENSOMEG00000008200	thoc1	99	71.779	ENSFCAG00000022454	THOC1	85	71.012	Felis_catus
ENSOMEG00000008200	thoc1	97	72.699	ENSFALG00000006205	THOC1	99	71.919	Ficedula_albicollis
ENSOMEG00000008200	thoc1	98	71.584	ENSFDAG00000006842	THOC1	99	70.807	Fukomys_damarensis
ENSOMEG00000008200	thoc1	100	90.061	ENSFHEG00000008841	thoc1	100	90.214	Fundulus_heteroclitus
ENSOMEG00000008200	thoc1	99	86.350	ENSGMOG00000011486	thoc1	99	86.963	Gadus_morhua
ENSOMEG00000008200	thoc1	99	72.129	ENSGALG00000014915	THOC1	99	70.651	Gallus_gallus
ENSOMEG00000008200	thoc1	100	88.226	ENSGAFG00000021464	thoc1	100	88.379	Gambusia_affinis
ENSOMEG00000008200	thoc1	100	90.520	ENSGACG00000017361	thoc1	100	91.131	Gasterosteus_aculeatus
ENSOMEG00000008200	thoc1	99	72.894	ENSGAGG00000021230	-	97	72.894	Gopherus_agassizii
ENSOMEG00000008200	thoc1	99	71.779	ENSGGOG00000003013	THOC1	98	71.012	Gorilla_gorilla
ENSOMEG00000008200	thoc1	100	91.131	ENSHBUG00000009096	thoc1	100	91.284	Haplochromis_burtoni
ENSOMEG00000008200	thoc1	99	71.779	ENSHGLG00000003712	-	98	71.012	Heterocephalus_glaber_female
ENSOMEG00000008200	thoc1	93	56.613	ENSHGLG00000009264	-	98	63.158	Heterocephalus_glaber_female
ENSOMEG00000008200	thoc1	99	71.626	ENSHGLG00100003570	THOC1	98	70.859	Heterocephalus_glaber_male
ENSOMEG00000008200	thoc1	93	55.399	ENSHGLG00100002225	-	98	58.730	Heterocephalus_glaber_male
ENSOMEG00000008200	thoc1	99	69.565	ENSIPUG00000005306	thoc1	100	69.255	Ictalurus_punctatus
ENSOMEG00000008200	thoc1	99	71.319	ENSSTOG00000006484	THOC1	98	70.552	Ictidomys_tridecemlineatus
ENSOMEG00000008200	thoc1	52	72.384	ENSJJAG00000014893	-	96	70.930	Jaculus_jaculus
ENSOMEG00000008200	thoc1	100	90.673	ENSKMAG00000003904	thoc1	100	89.893	Kryptolebias_marmoratus
ENSOMEG00000008200	thoc1	100	90.979	ENSLBEG00000020372	thoc1	98	90.214	Labrus_bergylta
ENSOMEG00000008200	thoc1	99	72.282	ENSLACG00000014869	THOC1	99	71.975	Latimeria_chalumnae
ENSOMEG00000008200	thoc1	100	81.126	ENSLOCG00000002097	thoc1	99	80.822	Lepisosteus_oculatus
ENSOMEG00000008200	thoc1	99	71.472	ENSLAFG00000009585	THOC1	98	70.706	Loxodonta_africana
ENSOMEG00000008200	thoc1	99	71.779	ENSMFAG00000041520	THOC1	98	71.012	Macaca_fascicularis
ENSOMEG00000008200	thoc1	99	71.779	ENSMMUG00000004662	THOC1	98	71.012	Macaca_mulatta
ENSOMEG00000008200	thoc1	99	71.779	ENSMNEG00000040177	THOC1	98	71.012	Macaca_nemestrina
ENSOMEG00000008200	thoc1	99	71.779	ENSMLEG00000034201	THOC1	98	71.012	Mandrillus_leucophaeus
ENSOMEG00000008200	thoc1	96	87.719	ENSMAMG00000016747	thoc1	100	87.879	Mastacembelus_armatus
ENSOMEG00000008200	thoc1	100	90.826	ENSMZEG00005024609	thoc1	100	90.979	Maylandia_zebra
ENSOMEG00000008200	thoc1	97	72.457	ENSMGAG00000009811	THOC1	99	71.674	Meleagris_gallopavo
ENSOMEG00000008200	thoc1	99	70.859	ENSMAUG00000010272	Thoc1	98	70.092	Mesocricetus_auratus
ENSOMEG00000008200	thoc1	99	71.626	ENSMICG00000027200	THOC1	98	70.859	Microcebus_murinus
ENSOMEG00000008200	thoc1	99	70.092	ENSMOCG00000014536	-	85	69.325	Microtus_ochrogaster
ENSOMEG00000008200	thoc1	99	62.366	ENSMOCG00000014924	-	95	62.212	Microtus_ochrogaster
ENSOMEG00000008200	thoc1	93	90.686	ENSMMOG00000011772	thoc1	100	89.869	Mola_mola
ENSOMEG00000008200	thoc1	99	70.061	ENSMODG00000021482	THOC1	98	70.061	Monodelphis_domestica
ENSOMEG00000008200	thoc1	100	89.602	ENSMALG00000021872	thoc1	100	89.602	Monopterus_albus
ENSOMEG00000008200	thoc1	99	71.166	MGP_CAROLIEiJ_G0021989	Thoc1	98	70.399	Mus_caroli
ENSOMEG00000008200	thoc1	99	71.012	ENSMUSG00000024287	Thoc1	98	70.245	Mus_musculus
ENSOMEG00000008200	thoc1	99	71.012	MGP_PahariEiJ_G0018726	Thoc1	98	70.245	Mus_pahari
ENSOMEG00000008200	thoc1	99	71.012	MGP_SPRETEiJ_G0022905	Thoc1	98	70.245	Mus_spretus
ENSOMEG00000008200	thoc1	99	71.626	ENSMPUG00000005448	THOC1	98	70.859	Mustela_putorius_furo
ENSOMEG00000008200	thoc1	99	70.859	ENSMLUG00000004090	-	98	70.092	Myotis_lucifugus
ENSOMEG00000008200	thoc1	90	65.604	ENSMLUG00000027965	-	99	65.101	Myotis_lucifugus
ENSOMEG00000008200	thoc1	61	65.163	ENSMLUG00000024912	-	100	64.411	Myotis_lucifugus
ENSOMEG00000008200	thoc1	99	71.472	ENSNGAG00000001401	-	98	70.706	Nannospalax_galili
ENSOMEG00000008200	thoc1	97	56.604	ENSNGAG00000008061	-	97	56.515	Nannospalax_galili
ENSOMEG00000008200	thoc1	98	88.558	ENSNBRG00000005991	thoc1	97	88.715	Neolamprologus_brichardi
ENSOMEG00000008200	thoc1	99	71.779	ENSNLEG00000006835	THOC1	98	71.012	Nomascus_leucogenys
ENSOMEG00000008200	thoc1	89	74.304	ENSMEUG00000009756	THOC1	82	74.304	Notamacropus_eugenii
ENSOMEG00000008200	thoc1	84	82.051	ENSOPRG00000001108	THOC1	98	57.515	Ochotona_princeps
ENSOMEG00000008200	thoc1	99	66.104	ENSODEG00000006623	THOC1	98	65.231	Octodon_degus
ENSOMEG00000008200	thoc1	100	90.826	ENSONIG00000009440	thoc1	98	90.937	Oreochromis_niloticus
ENSOMEG00000008200	thoc1	99	71.626	ENSOCUG00000011601	THOC1	98	70.859	Oryctolagus_cuniculus
ENSOMEG00000008200	thoc1	100	97.095	ENSORLG00000017629	thoc1	100	97.095	Oryzias_latipes
ENSOMEG00000008200	thoc1	100	97.248	ENSORLG00020007567	thoc1	100	97.248	Oryzias_latipes_hni
ENSOMEG00000008200	thoc1	100	97.401	ENSORLG00015007356	thoc1	100	97.401	Oryzias_latipes_hsok
ENSOMEG00000008200	thoc1	99	68.405	ENSOGAG00000000470	THOC1	98	67.638	Otolemur_garnettii
ENSOMEG00000008200	thoc1	98	72.613	ENSOARG00000009238	THOC1	96	71.831	Ovis_aries
ENSOMEG00000008200	thoc1	99	71.779	ENSPPAG00000031812	THOC1	98	71.012	Pan_paniscus
ENSOMEG00000008200	thoc1	99	71.166	ENSPPRG00000023794	THOC1	96	74.566	Panthera_pardus
ENSOMEG00000008200	thoc1	99	71.166	ENSPTIG00000007469	THOC1	96	74.566	Panthera_tigris_altaica
ENSOMEG00000008200	thoc1	99	70.865	ENSPTRG00000009816	THOC1	98	70.106	Pan_troglodytes
ENSOMEG00000008200	thoc1	99	70.884	ENSPANG00000008665	THOC1	98	70.122	Papio_anubis
ENSOMEG00000008200	thoc1	100	81.346	ENSPKIG00000005906	thoc1	100	81.957	Paramormyrops_kingsleyae
ENSOMEG00000008200	thoc1	77	82.258	ENSPSIG00000007691	THOC1	97	75.000	Pelodiscus_sinensis
ENSOMEG00000008200	thoc1	94	85.161	ENSPMGG00000008279	thoc1	95	84.355	Periophthalmus_magnuspinnatus
ENSOMEG00000008200	thoc1	99	70.859	ENSPEMG00000021789	Thoc1	98	70.092	Peromyscus_maniculatus_bairdii
ENSOMEG00000008200	thoc1	77	82.258	ENSPCIG00000026942	THOC1	97	70.816	Phascolarctos_cinereus
ENSOMEG00000008200	thoc1	100	88.073	ENSPFOG00000011673	thoc1	100	88.226	Poecilia_formosa
ENSOMEG00000008200	thoc1	100	88.379	ENSPLAG00000019648	thoc1	100	88.532	Poecilia_latipinna
ENSOMEG00000008200	thoc1	100	88.226	ENSPMEG00000007083	thoc1	100	88.379	Poecilia_mexicana
ENSOMEG00000008200	thoc1	100	88.532	ENSPREG00000006719	thoc1	100	88.685	Poecilia_reticulata
ENSOMEG00000008200	thoc1	74	74.897	ENSPPYG00000009049	-	98	73.868	Pongo_abelii
ENSOMEG00000008200	thoc1	91	72.464	ENSPCAG00000005320	THOC1	91	71.429	Procavia_capensis
ENSOMEG00000008200	thoc1	99	70.859	ENSPCOG00000009234	THOC1	98	70.092	Propithecus_coquereli
ENSOMEG00000008200	thoc1	99	70.092	ENSPVAG00000004007	THOC1	98	69.325	Pteropus_vampyrus
ENSOMEG00000008200	thoc1	100	91.131	ENSPNYG00000019152	thoc1	100	91.284	Pundamilia_nyererei
ENSOMEG00000008200	thoc1	100	83.180	ENSPNAG00000023390	thoc1	99	82.389	Pygocentrus_nattereri
ENSOMEG00000008200	thoc1	57	47.887	ENSRNOG00000032739	Da2-19	73	56.471	Rattus_norvegicus
ENSOMEG00000008200	thoc1	99	60.852	ENSRNOG00000015332	Thoc1	98	59.838	Rattus_norvegicus
ENSOMEG00000008200	thoc1	99	71.017	ENSRBIG00000033738	THOC1	99	72.444	Rhinopithecus_bieti
ENSOMEG00000008200	thoc1	99	71.779	ENSRROG00000044988	THOC1	96	75.439	Rhinopithecus_roxellana
ENSOMEG00000008200	thoc1	99	71.472	ENSSBOG00000016556	THOC1	98	70.706	Saimiri_boliviensis_boliviensis
ENSOMEG00000008200	thoc1	99	71.012	ENSSHAG00000014829	THOC1	98	71.012	Sarcophilus_harrisii
ENSOMEG00000008200	thoc1	100	84.251	ENSSFOG00015021527	thoc1	100	84.404	Scleropages_formosus
ENSOMEG00000008200	thoc1	100	87.768	ENSSMAG00000018465	thoc1	99	87.920	Scophthalmus_maximus
ENSOMEG00000008200	thoc1	100	91.743	ENSSDUG00000016810	thoc1	100	91.896	Seriola_dumerili
ENSOMEG00000008200	thoc1	100	91.743	ENSSLDG00000015555	thoc1	100	91.896	Seriola_lalandi_dorsalis
ENSOMEG00000008200	thoc1	86	72.112	ENSSARG00000006910	THOC1	85	70.120	Sorex_araneus
ENSOMEG00000008200	thoc1	98	71.518	ENSSPUG00000007238	THOC1	98	70.769	Sphenodon_punctatus
ENSOMEG00000008200	thoc1	100	86.280	ENSSPAG00000018847	thoc1	99	86.433	Stegastes_partitus
ENSOMEG00000008200	thoc1	99	71.626	ENSSSCG00000025653	THOC1	93	70.859	Sus_scrofa
ENSOMEG00000008200	thoc1	99	72.435	ENSTGUG00000010204	THOC1	99	71.669	Taeniopygia_guttata
ENSOMEG00000008200	thoc1	100	88.226	ENSTRUG00000013518	thoc1	100	88.838	Takifugu_rubripes
ENSOMEG00000008200	thoc1	100	87.003	ENSTNIG00000008473	thoc1	99	87.615	Tetraodon_nigroviridis
ENSOMEG00000008200	thoc1	99	64.877	ENSTBEG00000016920	THOC1	98	64.110	Tupaia_belangeri
ENSOMEG00000008200	thoc1	99	65.491	ENSTTRG00000016664	THOC1	98	64.724	Tursiops_truncatus
ENSOMEG00000008200	thoc1	99	71.626	ENSUAMG00000002527	THOC1	98	72.057	Ursus_americanus
ENSOMEG00000008200	thoc1	99	71.626	ENSUMAG00000019693	THOC1	98	70.859	Ursus_maritimus
ENSOMEG00000008200	thoc1	77	65.641	ENSVPAG00000003726	-	66	65.306	Vicugna_pacos
ENSOMEG00000008200	thoc1	99	71.626	ENSVVUG00000004384	THOC1	98	70.859	Vulpes_vulpes
ENSOMEG00000008200	thoc1	99	69.605	ENSXETG00000003155	thoc1	97	69.102	Xenopus_tropicalis
ENSOMEG00000008200	thoc1	96	81.949	ENSXCOG00000016085	thoc1	91	81.717	Xiphophorus_couchianus
ENSOMEG00000008200	thoc1	100	88.532	ENSXMAG00000002353	thoc1	100	88.685	Xiphophorus_maculatus