EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000008210 (Gene tree)
Gene ID: 112143357
Gene Symbol: rab13
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 10077 bases
Position: chrNVQA01000006.1:7848510-7858586
Accession: 112143357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000007127	MMR_HSR1	PF01926.23	7.4e-05	1	1
ENSOMEP00000007130	MMR_HSR1	PF01926.23	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000004643	-	624	-	ENSOMEP00000007130	207 (aa)	-	-
ENSOMET00000004651	-	2017	-	ENSOMEP00000007127	200 (aa)	XP_024123029	UPI000CF7ECD9

Gene Model

Click here to download ENSOMEG00000008210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000008210's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000008210	rab13	84	37.059	ENSOMEG00000011584	pth2r	71	37.059
ENSOMEG00000008210	rab13	88	36.413	ENSOMEG00000000336	RAB29	93	35.638
ENSOMEG00000008210	rab13	81	32.948	ENSOMEG00000019923	rasl11a	68	32.948
ENSOMEG00000008210	rab13	79	45.570	ENSOMEG00000004379	-	76	45.570
ENSOMEG00000008210	rab13	86	45.665	ENSOMEG00000006333	RAB39B	81	45.665
ENSOMEG00000008210	rab13	79	44.937	ENSOMEG00000017258	RAB41	75	44.937
ENSOMEG00000008210	rab13	96	32.292	ENSOMEG00000009463	rhebl1	96	32.292
ENSOMEG00000008210	rab13	85	39.891	ENSOMEG00000019819	rab33ba	76	39.891
ENSOMEG00000008210	rab13	82	39.286	ENSOMEG00000000162	rab9a	83	39.286
ENSOMEG00000008210	rab13	79	44.937	ENSOMEG00000014206	rab6ba	76	44.937
ENSOMEG00000008210	rab13	87	46.243	ENSOMEG00000002581	rab11ba	82	44.944
ENSOMEG00000008210	rab13	86	51.163	ENSOMEG00000008191	rab12	82	46.269
ENSOMEG00000008210	rab13	95	40.625	ENSOMEG00000010692	rab5aa	89	40.625
ENSOMEG00000008210	rab13	91	56.354	ENSOMEG00000009074	-	97	53.061
ENSOMEG00000008210	rab13	94	41.837	ENSOMEG00000017306	rab33a	72	41.837
ENSOMEG00000008210	rab13	88	36.723	ENSOMEG00000001706	rab23	90	36.508
ENSOMEG00000008210	rab13	86	57.895	ENSOMEG00000019462	RAB15	82	57.895
ENSOMEG00000008210	rab13	87	35.638	ENSOMEG00000011273	kras	98	35.751
ENSOMEG00000008210	rab13	84	31.250	ENSOMEG00000017890	dnajc27	66	31.844
ENSOMEG00000008210	rab13	95	43.590	ENSOMEG00000007546	rab18b	93	43.590
ENSOMEG00000008210	rab13	84	42.105	ENSOMEG00000017958	si:dkey-34d22.5	77	42.105
ENSOMEG00000008210	rab13	58	35.897	ENSOMEG00000011161	RAP2B	85	36.434
ENSOMEG00000008210	rab13	98	54.000	ENSOMEG00000006036	rab1ab	98	54.000
ENSOMEG00000008210	rab13	96	35.233	ENSOMEG00000000343	rras	97	35.417
ENSOMEG00000008210	rab13	77	30.573	ENSOMEG00000003861	-	82	30.573
ENSOMEG00000008210	rab13	66	30.075	ENSOMEG00000003868	arl4aa	68	30.075
ENSOMEG00000008210	rab13	87	47.399	ENSOMEG00000002562	-	82	46.067
ENSOMEG00000008210	rab13	98	38.806	ENSOMEG00000010156	-	97	38.806
ENSOMEG00000008210	rab13	96	44.776	ENSOMEG00000020271	rab11al	93	44.776
ENSOMEG00000008210	rab13	90	44.865	ENSOMEG00000020605	rab18a	88	44.865
ENSOMEG00000008210	rab13	86	42.775	ENSOMEG00000020418	rab42a	79	42.775
ENSOMEG00000008210	rab13	88	54.857	ENSOMEG00000022002	rab15	82	54.857
ENSOMEG00000008210	rab13	86	47.368	ENSOMEG00000001613	rab30	84	47.368
ENSOMEG00000008210	rab13	79	41.250	ENSOMEG00000003647	rab34a	53	41.250
ENSOMEG00000008210	rab13	87	47.977	ENSOMEG00000017467	rab11a	83	47.191
ENSOMEG00000008210	rab13	84	45.509	ENSOMEG00000009290	-	78	45.509
ENSOMEG00000008210	rab13	79	39.375	ENSOMEG00000010334	rab34b	65	39.375
ENSOMEG00000008210	rab13	98	52.709	ENSOMEG00000020594	zgc:171927	100	50.000
ENSOMEG00000008210	rab13	94	43.915	ENSOMEG00000018494	-	77	43.915
ENSOMEG00000008210	rab13	85	49.112	ENSOMEG00000015474	si:dkey-16l2.16	91	46.842
ENSOMEG00000008210	rab13	73	46.622	ENSOMEG00000013128	zgc:101559	64	46.622
ENSOMEG00000008210	rab13	88	38.547	ENSOMEG00000017263	-	99	35.437
ENSOMEG00000008210	rab13	85	46.512	ENSOMEG00000017881	-	81	46.512
ENSOMEG00000008210	rab13	96	40.314	ENSOMEG00000020350	rab25b	93	39.785
ENSOMEG00000008210	rab13	81	41.615	ENSOMEG00000023078	rab5c	89	37.113
ENSOMEG00000008210	rab13	84	48.214	ENSOMEG00000016752	rab2a	79	48.214
ENSOMEG00000008210	rab13	87	47.399	ENSOMEG00000017806	-	82	46.067
ENSOMEG00000008210	rab13	88	33.152	ENSOMEG00000008576	rabl2	79	33.152
ENSOMEG00000008210	rab13	86	35.227	ENSOMEG00000013685	rheb	93	35.227
ENSOMEG00000008210	rab13	88	43.750	ENSOMEG00000023625	rab6bb	91	43.750
ENSOMEG00000008210	rab13	84	44.311	ENSOMEG00000003623	rab14	78	44.311
ENSOMEG00000008210	rab13	75	48.387	ENSOMEG00000021726	-	64	48.387
ENSOMEG00000008210	rab13	86	41.860	ENSOMEG00000010510	rab25a	84	41.477
ENSOMEG00000008210	rab13	81	35.802	ENSOMEG00000016685	zgc:55558	86	35.802
ENSOMEG00000008210	rab13	69	31.159	ENSOMEG00000007691	arl3	77	31.159
ENSOMEG00000008210	rab13	83	41.176	ENSOMEG00000008327	rab9b	78	41.176
ENSOMEG00000008210	rab13	86	36.628	ENSOMEG00000018719	hrasb	90	36.628
ENSOMEG00000008210	rab13	93	35.263	ENSOMEG00000023716	opn1sw2	93	35.263
ENSOMEG00000008210	rab13	84	41.040	ENSOMEG00000009701	RAB9A	86	41.040

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000008210	rab13	99	76.238	ENSG00000143545	RAB13	99	76.238	Homo_sapiens
ENSOMEG00000008210	rab13	91	94.505	ENSACIG00000008584	rab13	91	92.593	Amphilophus_citrinellus
ENSOMEG00000008210	rab13	99	76.961	ENSANAG00000030247	-	99	76.961	Aotus_nancymaae
ENSOMEG00000008210	rab13	100	92.079	ENSAMXG00000030712	rab13	100	92.079	Astyanax_mexicanus
ENSOMEG00000008210	rab13	99	75.243	ENSBTAG00000017604	RAB13	95	80.208	Bos_taurus
ENSOMEG00000008210	rab13	81	48.148	WBGene00019317	K02E10.1	74	48.148	Caenorhabditis_elegans
ENSOMEG00000008210	rab13	90	81.818	ENSCJAG00000009933	-	95	80.729	Callithrix_jacchus
ENSOMEG00000008210	rab13	87	86.127	ENSCHIG00000022271	-	95	80.208	Capra_hircus
ENSOMEG00000008210	rab13	99	76.238	ENSCPOG00000011491	-	98	78.894	Cavia_porcellus
ENSOMEG00000008210	rab13	99	76.238	ENSCCAG00000028502	-	99	76.238	Cebus_capucinus
ENSOMEG00000008210	rab13	99	76.238	ENSCATG00000041779	-	99	76.238	Cercocebus_atys
ENSOMEG00000008210	rab13	99	76.238	ENSCLAG00000006603	-	98	77.889	Chinchilla_lanigera
ENSOMEG00000008210	rab13	99	76.238	ENSCANG00000036573	-	99	76.238	Colobus_angolensis_palliatus
ENSOMEG00000008210	rab13	99	75.980	ENSCGRG00001021505	Rab13	99	75.980	Cricetulus_griseus_chok1gshd
ENSOMEG00000008210	rab13	99	75.980	ENSCGRG00000012126	Rab13	99	75.980	Cricetulus_griseus_crigri
ENSOMEG00000008210	rab13	100	93.500	ENSCSEG00000002358	rab13	100	93.500	Cynoglossus_semilaevis
ENSOMEG00000008210	rab13	100	93.000	ENSDARG00000034771	rab13	100	93.000	Danio_rerio
ENSOMEG00000008210	rab13	99	77.670	ENSDORG00000001591	Rab13	98	79.397	Dipodomys_ordii
ENSOMEG00000008210	rab13	99	76.238	ENSEASG00005000683	-	99	76.238	Equus_asinus_asinus
ENSOMEG00000008210	rab13	99	76.238	ENSECAG00000016551	RAB13	99	76.238	Equus_caballus
ENSOMEG00000008210	rab13	100	73.399	ENSEEUG00000001233	-	100	73.399	Erinaceus_europaeus
ENSOMEG00000008210	rab13	100	91.500	ENSELUG00000012801	rab13	100	91.500	Esox_lucius
ENSOMEG00000008210	rab13	99	75.490	ENSFCAG00000045269	-	98	76.884	Felis_catus
ENSOMEG00000008210	rab13	66	89.313	ENSFDAG00000014469	-	99	89.313	Fukomys_damarensis
ENSOMEG00000008210	rab13	100	90.000	ENSFHEG00000021221	rab13	97	94.915	Fundulus_heteroclitus
ENSOMEG00000008210	rab13	100	94.500	ENSGACG00000011925	rab13	99	94.500	Gasterosteus_aculeatus
ENSOMEG00000008210	rab13	91	83.607	ENSGAGG00000000742	-	100	78.218	Gopherus_agassizii
ENSOMEG00000008210	rab13	99	76.238	ENSGGOG00000023693	RAB13	99	76.238	Gorilla_gorilla
ENSOMEG00000008210	rab13	99	75.622	ENSHGLG00000008749	RAB13	99	75.622	Heterocephalus_glaber_female
ENSOMEG00000008210	rab13	99	75.622	ENSHGLG00100013608	RAB13	99	75.622	Heterocephalus_glaber_male
ENSOMEG00000008210	rab13	100	89.000	ENSHCOG00000007440	rab13	100	96.154	Hippocampus_comes
ENSOMEG00000008210	rab13	100	90.050	ENSIPUG00000003199	rab13	100	90.050	Ictalurus_punctatus
ENSOMEG00000008210	rab13	99	76.699	ENSSTOG00000011222	-	98	79.397	Ictidomys_tridecemlineatus
ENSOMEG00000008210	rab13	99	77.723	ENSJJAG00000010575	Rab13	99	77.723	Jaculus_jaculus
ENSOMEG00000008210	rab13	100	92.500	ENSKMAG00000001908	rab13	100	92.500	Kryptolebias_marmoratus
ENSOMEG00000008210	rab13	100	94.000	ENSLBEG00000026779	rab13	100	94.000	Labrus_bergylta
ENSOMEG00000008210	rab13	89	78.531	ENSLACG00000008103	-	100	78.652	Latimeria_chalumnae
ENSOMEG00000008210	rab13	99	76.238	ENSMFAG00000041018	RAB13	99	76.238	Macaca_fascicularis
ENSOMEG00000008210	rab13	99	76.238	ENSMNEG00000028951	-	99	76.238	Macaca_nemestrina
ENSOMEG00000008210	rab13	99	76.238	ENSMLEG00000042247	-	99	76.238	Mandrillus_leucophaeus
ENSOMEG00000008210	rab13	100	95.500	ENSMAMG00000014602	rab13	100	95.500	Mastacembelus_armatus
ENSOMEG00000008210	rab13	99	76.238	ENSMAUG00000015713	Rab13	99	76.238	Mesocricetus_auratus
ENSOMEG00000008210	rab13	99	77.114	ENSMICG00000010340	-	99	77.114	Microcebus_murinus
ENSOMEG00000008210	rab13	99	76.733	ENSMOCG00000021448	Rab13	99	76.733	Microtus_ochrogaster
ENSOMEG00000008210	rab13	99	77.228	ENSMODG00000017295	-	84	77.228	Monodelphis_domestica
ENSOMEG00000008210	rab13	99	74.020	MGP_CAROLIEiJ_G0025227	Rab13	99	74.020	Mus_caroli
ENSOMEG00000008210	rab13	99	74.757	ENSMUSG00000027935	Rab13	99	74.757	Mus_musculus
ENSOMEG00000008210	rab13	100	74.146	MGP_PahariEiJ_G0026671	Rab13	100	74.146	Mus_pahari
ENSOMEG00000008210	rab13	99	76.471	ENSNGAG00000010309	Rab13	99	76.471	Nannospalax_galili
ENSOMEG00000008210	rab13	100	94.500	ENSNBRG00000004124	rab13	100	94.500	Neolamprologus_brichardi
ENSOMEG00000008210	rab13	99	76.238	ENSNLEG00000028944	-	96	80.423	Nomascus_leucogenys
ENSOMEG00000008210	rab13	99	77.228	ENSMEUG00000009667	-	99	77.228	Notamacropus_eugenii
ENSOMEG00000008210	rab13	64	88.976	ENSODEG00000012634	-	100	88.976	Octodon_degus
ENSOMEG00000008210	rab13	99	75.743	ENSODEG00000010443	-	99	75.743	Octodon_degus
ENSOMEG00000008210	rab13	100	91.089	ENSONIG00000006340	rab13	100	91.089	Oreochromis_niloticus
ENSOMEG00000008210	rab13	87	86.127	ENSOCUG00000006286	-	99	84.659	Oryctolagus_cuniculus
ENSOMEG00000008210	rab13	99	76.500	ENSOGAG00000016969	-	96	79.688	Otolemur_garnettii
ENSOMEG00000008210	rab13	99	76.238	ENSPPAG00000028435	-	99	76.238	Pan_paniscus
ENSOMEG00000008210	rab13	99	75.490	ENSPPRG00000008865	-	98	76.884	Panthera_pardus
ENSOMEG00000008210	rab13	99	76.238	ENSPTRG00000001370	RAB13	99	76.238	Pan_troglodytes
ENSOMEG00000008210	rab13	99	76.238	ENSPANG00000004479	-	99	76.238	Papio_anubis
ENSOMEG00000008210	rab13	100	92.500	ENSPMGG00000007680	rab13	100	92.500	Periophthalmus_magnuspinnatus
ENSOMEG00000008210	rab13	63	78.788	ENSPEMG00000017353	-	99	78.788	Peromyscus_maniculatus_bairdii
ENSOMEG00000008210	rab13	99	77.228	ENSPCIG00000029350	-	99	77.228	Phascolarctos_cinereus
ENSOMEG00000008210	rab13	89	96.045	ENSPLAG00000005832	RAB13	95	96.067	Poecilia_latipinna
ENSOMEG00000008210	rab13	100	92.000	ENSPREG00000017567	rab13	100	92.000	Poecilia_reticulata
ENSOMEG00000008210	rab13	99	76.238	ENSPPYG00000000790	-	99	76.238	Pongo_abelii
ENSOMEG00000008210	rab13	99	77.612	ENSPCOG00000012189	-	99	77.612	Propithecus_coquereli
ENSOMEG00000008210	rab13	99	76.617	ENSPVAG00000011095	-	99	76.617	Pteropus_vampyrus
ENSOMEG00000008210	rab13	89	97.740	ENSPNAG00000004189	rab13	95	97.765	Pygocentrus_nattereri
ENSOMEG00000008210	rab13	99	75.000	ENSRNOG00000016733	Rab13	99	75.000	Rattus_norvegicus
ENSOMEG00000008210	rab13	99	76.238	ENSRBIG00000008552	-	99	76.238	Rhinopithecus_bieti
ENSOMEG00000008210	rab13	99	76.238	ENSRROG00000036885	-	99	76.238	Rhinopithecus_roxellana
ENSOMEG00000008210	rab13	99	77.114	ENSSBOG00000020342	-	99	77.114	Saimiri_boliviensis_boliviensis
ENSOMEG00000008210	rab13	99	78.218	ENSSHAG00000011866	-	99	78.218	Sarcophilus_harrisii
ENSOMEG00000008210	rab13	99	75.728	ENSSSCG00000006564	-	95	80.729	Sus_scrofa
ENSOMEG00000008210	rab13	100	95.500	ENSTRUG00000024177	rab13	100	95.500	Takifugu_rubripes
ENSOMEG00000008210	rab13	99	77.228	ENSTBEG00000012734	-	99	77.228	Tupaia_belangeri
ENSOMEG00000008210	rab13	99	75.728	ENSTTRG00000011183	-	95	80.729	Tursiops_truncatus
ENSOMEG00000008210	rab13	69	81.159	ENSXETG00000020729	rab13	100	73.125	Xenopus_tropicalis
ENSOMEG00000008210	rab13	89	94.915	ENSXCOG00000019533	rab13	99	91.892	Xiphophorus_couchianus