EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000008238 (Gene tree)
Gene ID: 112139961
Gene Symbol: rbm12
Alias: -
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 2703 bases
Position: chrNVQA01004123.1:273849-276551
Accession: 112139961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000026422	RRM_1	PF00076.22	3.2e-34	1	3
ENSOMEP00000026422	RRM_1	PF00076.22	3.2e-34	2	3
ENSOMEP00000026422	RRM_1	PF00076.22	3.2e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000004580	-	2703	-	ENSOMEP00000026422	900 (aa)	XP_024118606	UPI000CF81D14

Gene Model

Click here to download ENSOMEG00000008238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000008238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000008238	rbm12	55	72.619	ENSOMEG00000022523	rbm12b	84	72.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000008238	rbm12	100	81.477	ENSACIG00000011053	rbm12	100	81.057	Amphilophus_citrinellus
ENSOMEG00000008238	rbm12	100	81.147	ENSAOCG00000019579	rbm12	100	81.257	Amphiprion_ocellaris
ENSOMEG00000008238	rbm12	67	77.600	ENSCCAG00000035899	-	84	74.390	Cebus_capucinus
ENSOMEG00000008238	rbm12	100	58.360	ENSDARG00000100636	rbm12	100	57.481	Danio_rerio
ENSOMEG00000008238	rbm12	72	71.765	ENSDORG00000000606	-	72	74.390	Dipodomys_ordii
ENSOMEG00000008238	rbm12	57	84.043	ENSEBUG00000016806	rbm12	74	84.043	Eptatretus_burgeri
ENSOMEG00000008238	rbm12	100	45.130	ENSFALG00000012516	RBM12	100	44.831	Ficedula_albicollis
ENSOMEG00000008238	rbm12	100	79.231	ENSGACG00000004202	rbm12	98	79.011	Gasterosteus_aculeatus
ENSOMEG00000008238	rbm12	100	59.101	ENSIPUG00000014491	rbm12	100	57.447	Ictalurus_punctatus
ENSOMEG00000008238	rbm12	77	65.854	ENSJJAG00000009879	-	77	65.854	Jaculus_jaculus
ENSOMEG00000008238	rbm12	64	83.582	ENSMAMG00000001497	rbm12	94	83.582	Mastacembelus_armatus
ENSOMEG00000008238	rbm12	100	77.704	ENSMMOG00000013495	rbm12	100	77.594	Mola_mola
ENSOMEG00000008238	rbm12	100	43.710	ENSXETG00000033541	RBM12	73	46.177	Xenopus_tropicalis
ENSOMEG00000008238	rbm12	99	76.923	ENSXCOG00000014073	rbm12	99	76.264	Xiphophorus_couchianus