EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000008561 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 2652 bases
Position: chrNVQA01000009.1:2791737-2794388
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000026632	La	PF05383.17	1.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000004076	-	582	-	ENSOMEP00000026632	193 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000008561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000008561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000008561	-	77	72.973	ENSOMEG00000019749	larp4aa	74	75.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000008561	-	75	72.917	ENSG00000161813	LARP4	76	73.427	Homo_sapiens
ENSOMEG00000008561	-	94	67.204	ENSACIG00000000370	-	94	67.204	Amphilophus_citrinellus
ENSOMEG00000008561	-	75	74.483	ENSACIG00000001198	larp4aa	81	74.483	Amphilophus_citrinellus
ENSOMEG00000008561	-	96	64.362	ENSAPEG00000015441	larp4ab	84	64.362	Amphiprion_percula
ENSOMEG00000008561	-	97	68.783	ENSACLG00000000777	larp4ab	52	68.783	Astatotilapia_calliptera
ENSOMEG00000008561	-	69	57.664	ENSCCAG00000030343	-	76	57.664	Cebus_capucinus
ENSOMEG00000008561	-	75	58.333	ENSCATG00000039611	-	76	58.333	Cercocebus_atys
ENSOMEG00000008561	-	64	73.171	ENSCANG00000033097	-	53	73.171	Colobus_angolensis_palliatus
ENSOMEG00000008561	-	79	63.636	ENSCGRG00001000311	-	81	63.636	Cricetulus_griseus_chok1gshd
ENSOMEG00000008561	-	75	65.517	ENSCGRG00001011032	-	65	65.517	Cricetulus_griseus_chok1gshd
ENSOMEG00000008561	-	95	56.522	ENSCGRG00001011674	-	84	56.522	Cricetulus_griseus_chok1gshd
ENSOMEG00000008561	-	94	56.284	ENSCGRG00000000087	-	96	56.284	Cricetulus_griseus_crigri
ENSOMEG00000008561	-	85	65.854	ENSCVAG00000001411	-	90	65.854	Cyprinodon_variegatus
ENSOMEG00000008561	-	78	73.510	ENSDARG00000074979	larp4ab	85	72.667	Danio_rerio
ENSOMEG00000008561	-	54	55.238	ENSEBUG00000005290	-	50	55.238	Eptatretus_burgeri
ENSOMEG00000008561	-	75	68.056	ENSFDAG00000003796	-	79	68.056	Fukomys_damarensis
ENSOMEG00000008561	-	96	69.681	ENSHBUG00000021929	-	89	69.681	Haplochromis_burtoni
ENSOMEG00000008561	-	75	68.750	ENSHGLG00100000622	-	68	68.750	Heterocephalus_glaber_male
ENSOMEG00000008561	-	77	70.470	ENSJJAG00000014649	-	85	70.470	Jaculus_jaculus
ENSOMEG00000008561	-	74	59.441	ENSMFAG00000001037	-	75	59.441	Macaca_fascicularis
ENSOMEG00000008561	-	74	59.441	ENSMMUG00000045683	-	75	59.441	Macaca_mulatta
ENSOMEG00000008561	-	74	53.846	ENSMNEG00000037799	-	74	53.846	Macaca_nemestrina
ENSOMEG00000008561	-	75	59.028	ENSMLEG00000038232	-	81	59.028	Mandrillus_leucophaeus
ENSOMEG00000008561	-	97	68.783	ENSMZEG00005007771	larp4ab	52	68.783	Maylandia_zebra
ENSOMEG00000008561	-	74	73.239	ENSMICG00000046883	-	78	73.239	Microcebus_murinus
ENSOMEG00000008561	-	65	78.571	ENSMICG00000030156	-	62	78.571	Microcebus_murinus
ENSOMEG00000008561	-	97	70.103	ENSMMOG00000021861	larp4ab	54	70.103	Mola_mola
ENSOMEG00000008561	-	96	70.312	ENSMALG00000015637	-	82	70.312	Monopterus_albus
ENSOMEG00000008561	-	81	69.427	ENSMALG00000018631	larp4aa	79	74.324	Monopterus_albus
ENSOMEG00000008561	-	92	66.667	ENSNBRG00000015675	larp4ab	95	66.667	Neolamprologus_brichardi
ENSOMEG00000008561	-	96	80.319	ENSORLG00000018835	-	88	80.319	Oryzias_latipes
ENSOMEG00000008561	-	96	81.383	ENSORLG00020009602	-	88	81.383	Oryzias_latipes_hni
ENSOMEG00000008561	-	97	78.947	ENSORLG00015005865	-	91	78.947	Oryzias_latipes_hsok
ENSOMEG00000008561	-	73	75.714	ENSPMGG00000023289	-	92	75.714	Periophthalmus_magnuspinnatus
ENSOMEG00000008561	-	74	57.746	ENSPMAG00000001038	-	57	57.746	Petromyzon_marinus
ENSOMEG00000008561	-	97	67.895	ENSPREG00000016263	larp4ab	90	68.947	Poecilia_reticulata
ENSOMEG00000008561	-	96	69.681	ENSPNYG00000000915	-	76	69.681	Pundamilia_nyererei
ENSOMEG00000008561	-	72	58.993	ENSSBOG00000035851	-	74	58.993	Saimiri_boliviensis_boliviensis
ENSOMEG00000008561	-	76	74.150	ENSSPAG00000007222	larp4aa	76	74.150	Stegastes_partitus
ENSOMEG00000008561	-	97	66.842	ENSXCOG00000019635	larp4ab	89	67.539	Xiphophorus_couchianus