EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000008989 (Gene tree)
Gene ID: 112159782
Gene Symbol: lrrc47
Alias: -
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 6718 bases
Position: chrNVQA01000024.1:7016657-7023374
Accession: ZDB-GENE-060503-289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000026874	B3_4	PF03483.17	5.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000003423	-	3144	-	ENSOMEP00000026874	559 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000008989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000008989's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000008989	lrrc47	99	54.073	ENSG00000130764	LRRC47	99	54.138	Homo_sapiens
ENSOMEG00000008989	lrrc47	100	81.395	ENSAPOG00000019553	lrrc47	100	81.395	Acanthochromis_polyacanthus
ENSOMEG00000008989	lrrc47	76	60.000	ENSAMEG00000009152	LRRC47	94	60.230	Ailuropoda_melanoleuca
ENSOMEG00000008989	lrrc47	67	63.446	ENSAPLG00000003167	LRRC47	99	63.446	Anas_platyrhynchos
ENSOMEG00000008989	lrrc47	67	60.053	ENSACAG00000008267	LRRC47	100	60.317	Anolis_carolinensis
ENSOMEG00000008989	lrrc47	99	53.033	ENSANAG00000025576	LRRC47	99	53.103	Aotus_nancymaae
ENSOMEG00000008989	lrrc47	99	54.340	ENSBTAG00000004738	LRRC47	99	55.017	Bos_taurus
ENSOMEG00000008989	lrrc47	96	55.315	ENSCAFG00000019492	LRRC47	97	55.304	Canis_familiaris
ENSOMEG00000008989	lrrc47	99	55.497	ENSCAFG00020009667	LRRC47	99	55.401	Canis_lupus_dingo
ENSOMEG00000008989	lrrc47	99	55.268	ENSCHIG00000022607	LRRC47	98	55.903	Capra_hircus
ENSOMEG00000008989	lrrc47	96	54.955	ENSTSYG00000009326	LRRC47	97	55.026	Carlito_syrichta
ENSOMEG00000008989	lrrc47	66	59.840	ENSCAPG00000016517	LRRC47	99	59.682	Cavia_aperea
ENSOMEG00000008989	lrrc47	99	54.167	ENSCPOG00000014931	LRRC47	95	54.167	Cavia_porcellus
ENSOMEG00000008989	lrrc47	99	53.472	ENSCCAG00000024895	LRRC47	99	53.448	Cebus_capucinus
ENSOMEG00000008989	lrrc47	99	54.419	ENSCATG00000029337	LRRC47	99	54.138	Cercocebus_atys
ENSOMEG00000008989	lrrc47	99	54.625	ENSCLAG00000006093	LRRC47	99	54.799	Chinchilla_lanigera
ENSOMEG00000008989	lrrc47	99	54.593	ENSCSAG00000000727	LRRC47	99	54.310	Chlorocebus_sabaeus
ENSOMEG00000008989	lrrc47	99	50.333	ENSCPBG00000019404	LRRC47	99	51.265	Chrysemys_picta_bellii
ENSOMEG00000008989	lrrc47	79	57.298	ENSCANG00000030701	LRRC47	96	57.143	Colobus_angolensis_palliatus
ENSOMEG00000008989	lrrc47	99	54.419	ENSCGRG00001015159	Lrrc47	89	54.671	Cricetulus_griseus_chok1gshd
ENSOMEG00000008989	lrrc47	66	59.524	ENSCGRG00000017336	Lrrc47	97	60.976	Cricetulus_griseus_crigri
ENSOMEG00000008989	lrrc47	100	73.882	ENSCSEG00000006217	lrrc47	96	73.882	Cynoglossus_semilaevis
ENSOMEG00000008989	lrrc47	66	61.273	ENSDORG00000016594	Lrrc47	99	61.273	Dipodomys_ordii
ENSOMEG00000008989	lrrc47	99	55.633	ENSEASG00005021788	LRRC47	99	55.938	Equus_asinus_asinus
ENSOMEG00000008989	lrrc47	99	55.286	ENSECAG00000022472	LRRC47	89	55.594	Equus_caballus
ENSOMEG00000008989	lrrc47	100	67.901	ENSELUG00000017544	lrrc47	98	68.607	Esox_lucius
ENSOMEG00000008989	lrrc47	94	54.679	ENSFCAG00000011632	LRRC47	96	54.862	Felis_catus
ENSOMEG00000008989	lrrc47	70	62.690	ENSFALG00000009631	LRRC47	99	57.778	Ficedula_albicollis
ENSOMEG00000008989	lrrc47	100	64.799	ENSGMOG00000015674	lrrc47	99	66.310	Gadus_morhua
ENSOMEG00000008989	lrrc47	99	52.364	ENSGALG00000050995	LRRC47	99	52.539	Gallus_gallus
ENSOMEG00000008989	lrrc47	100	75.000	ENSGACG00000005550	lrrc47	99	75.179	Gasterosteus_aculeatus
ENSOMEG00000008989	lrrc47	99	50.083	ENSGAGG00000022584	LRRC47	99	51.852	Gopherus_agassizii
ENSOMEG00000008989	lrrc47	99	54.246	ENSGGOG00000015571	LRRC47	99	54.310	Gorilla_gorilla
ENSOMEG00000008989	lrrc47	99	53.299	ENSHGLG00000018278	LRRC47	95	53.299	Heterocephalus_glaber_female
ENSOMEG00000008989	lrrc47	70	58.561	ENSHGLG00100008507	LRRC47	99	58.561	Heterocephalus_glaber_male
ENSOMEG00000008989	lrrc47	100	75.492	ENSHCOG00000006348	lrrc47	98	75.313	Hippocampus_comes
ENSOMEG00000008989	lrrc47	99	55.268	ENSSTOG00000027559	LRRC47	99	55.613	Ictidomys_tridecemlineatus
ENSOMEG00000008989	lrrc47	99	55.035	ENSJJAG00000017474	Lrrc47	96	55.208	Jaculus_jaculus
ENSOMEG00000008989	lrrc47	100	80.501	ENSKMAG00000003414	lrrc47	100	80.501	Kryptolebias_marmoratus
ENSOMEG00000008989	lrrc47	99	55.382	ENSLAFG00000011657	LRRC47	99	55.517	Loxodonta_africana
ENSOMEG00000008989	lrrc47	99	39.451	ENSMFAG00000045730	LRRC47	88	56.118	Macaca_fascicularis
ENSOMEG00000008989	lrrc47	99	54.419	ENSMNEG00000042488	LRRC47	99	54.310	Macaca_nemestrina
ENSOMEG00000008989	lrrc47	77	56.920	ENSMLEG00000043735	LRRC47	90	56.763	Mandrillus_leucophaeus
ENSOMEG00000008989	lrrc47	99	55.245	ENSMAUG00000021337	Lrrc47	97	55.769	Mesocricetus_auratus
ENSOMEG00000008989	lrrc47	99	53.793	ENSMICG00000026816	LRRC47	99	54.639	Microcebus_murinus
ENSOMEG00000008989	lrrc47	99	55.282	ENSMOCG00000021279	Lrrc47	99	55.634	Microtus_ochrogaster
ENSOMEG00000008989	lrrc47	100	76.744	ENSMMOG00000017007	lrrc47	100	76.744	Mola_mola
ENSOMEG00000008989	lrrc47	99	45.026	ENSMODG00000006554	LRRC47	98	52.522	Monodelphis_domestica
ENSOMEG00000008989	lrrc47	99	55.478	MGP_CAROLIEiJ_G0026864	Lrrc47	99	55.363	Mus_caroli
ENSOMEG00000008989	lrrc47	99	55.652	ENSMUSG00000029028	Lrrc47	99	55.536	Mus_musculus
ENSOMEG00000008989	lrrc47	97	55.752	MGP_PahariEiJ_G0029212	Lrrc47	97	55.810	Mus_pahari
ENSOMEG00000008989	lrrc47	99	54.957	MGP_SPRETEiJ_G0027857	Lrrc47	99	54.844	Mus_spretus
ENSOMEG00000008989	lrrc47	66	60.582	ENSMPUG00000007321	LRRC47	75	60.582	Mustela_putorius_furo
ENSOMEG00000008989	lrrc47	99	54.291	ENSNGAG00000022153	Lrrc47	98	54.878	Nannospalax_galili
ENSOMEG00000008989	lrrc47	99	53.217	ENSNLEG00000008131	LRRC47	99	53.460	Nomascus_leucogenys
ENSOMEG00000008989	lrrc47	84	55.533	ENSODEG00000010882	LRRC47	93	55.738	Octodon_degus
ENSOMEG00000008989	lrrc47	97	91.296	ENSORLG00000002532	lrrc47	100	91.296	Oryzias_latipes
ENSOMEG00000008989	lrrc47	100	91.950	ENSORLG00020019601	lrrc47	100	91.950	Oryzias_latipes_hni
ENSOMEG00000008989	lrrc47	100	91.950	ENSORLG00015014040	lrrc47	100	91.950	Oryzias_latipes_hsok
ENSOMEG00000008989	lrrc47	99	54.404	ENSOGAG00000001553	LRRC47	99	54.577	Otolemur_garnettii
ENSOMEG00000008989	lrrc47	99	52.604	ENSOARG00000015290	LRRC47	99	53.460	Ovis_aries
ENSOMEG00000008989	lrrc47	75	58.178	ENSPPAG00000036370	-	98	58.469	Pan_paniscus
ENSOMEG00000008989	lrrc47	99	54.783	ENSPPRG00000005261	LRRC47	98	54.957	Panthera_pardus
ENSOMEG00000008989	lrrc47	99	54.419	ENSPTRG00000000068	LRRC47	99	54.483	Pan_troglodytes
ENSOMEG00000008989	lrrc47	99	54.593	ENSPANG00000012437	LRRC47	99	54.310	Papio_anubis
ENSOMEG00000008989	lrrc47	66	62.334	ENSPSIG00000004196	LRRC47	99	62.334	Pelodiscus_sinensis
ENSOMEG00000008989	lrrc47	66	62.133	ENSPEMG00000021068	Lrrc47	99	61.968	Peromyscus_maniculatus_bairdii
ENSOMEG00000008989	lrrc47	99	55.420	ENSPCIG00000003638	LRRC47	98	56.174	Phascolarctos_cinereus
ENSOMEG00000008989	lrrc47	94	79.545	ENSPFOG00000000992	lrrc47	94	78.977	Poecilia_formosa
ENSOMEG00000008989	lrrc47	100	79.428	ENSPLAG00000008077	lrrc47	100	78.891	Poecilia_latipinna
ENSOMEG00000008989	lrrc47	100	79.070	ENSPMEG00000007367	lrrc47	100	78.891	Poecilia_mexicana
ENSOMEG00000008989	lrrc47	99	54.246	ENSPPYG00000001960	LRRC47	99	54.310	Pongo_abelii
ENSOMEG00000008989	lrrc47	99	54.861	ENSPCOG00000019161	LRRC47	99	54.296	Propithecus_coquereli
ENSOMEG00000008989	lrrc47	99	53.846	ENSPVAG00000009839	LRRC47	99	54.073	Pteropus_vampyrus
ENSOMEG00000008989	lrrc47	99	62.877	ENSPNAG00000017982	lrrc47	99	63.233	Pygocentrus_nattereri
ENSOMEG00000008989	lrrc47	99	53.979	ENSRNOG00000024796	Lrrc47	99	54.498	Rattus_norvegicus
ENSOMEG00000008989	lrrc47	99	54.593	ENSRBIG00000019437	LRRC47	99	54.310	Rhinopithecus_bieti
ENSOMEG00000008989	lrrc47	99	54.593	ENSRROG00000043182	LRRC47	99	54.310	Rhinopithecus_roxellana
ENSOMEG00000008989	lrrc47	79	56.512	ENSSBOG00000026334	LRRC47	92	56.798	Saimiri_boliviensis_boliviensis
ENSOMEG00000008989	lrrc47	99	49.393	ENSSHAG00000007360	LRRC47	98	49.828	Sarcophilus_harrisii
ENSOMEG00000008989	lrrc47	100	78.571	ENSSMAG00000009344	lrrc47	100	78.571	Scophthalmus_maximus
ENSOMEG00000008989	lrrc47	100	81.216	ENSSDUG00000014618	lrrc47	100	81.216	Seriola_dumerili
ENSOMEG00000008989	lrrc47	100	81.216	ENSSLDG00000018908	lrrc47	100	81.216	Seriola_lalandi_dorsalis
ENSOMEG00000008989	lrrc47	99	51.807	ENSSPUG00000010277	LRRC47	98	52.324	Sphenodon_punctatus
ENSOMEG00000008989	lrrc47	100	82.290	ENSSPAG00000005188	lrrc47	100	82.290	Stegastes_partitus
ENSOMEG00000008989	lrrc47	99	55.304	ENSSSCG00000039516	LRRC47	98	55.268	Sus_scrofa
ENSOMEG00000008989	lrrc47	72	60.794	ENSTGUG00000002737	LRRC47	99	60.794	Taeniopygia_guttata
ENSOMEG00000008989	lrrc47	100	76.029	ENSTRUG00000017696	lrrc47	100	75.850	Takifugu_rubripes
ENSOMEG00000008989	lrrc47	100	73.882	ENSTNIG00000010923	lrrc47	99	73.084	Tetraodon_nigroviridis
ENSOMEG00000008989	lrrc47	99	54.246	ENSTTRG00000011751	LRRC47	99	54.246	Tursiops_truncatus
ENSOMEG00000008989	lrrc47	89	56.647	ENSUAMG00000012080	LRRC47	98	56.647	Ursus_americanus
ENSOMEG00000008989	lrrc47	66	61.376	ENSUMAG00000010781	LRRC47	80	61.376	Ursus_maritimus
ENSOMEG00000008989	lrrc47	99	51.807	ENSVVUG00000027118	LRRC47	99	51.807	Vulpes_vulpes
ENSOMEG00000008989	lrrc47	99	56.863	ENSXETG00000006029	lrrc47	97	57.609	Xenopus_tropicalis
ENSOMEG00000008989	lrrc47	99	78.843	ENSXCOG00000002813	lrrc47	98	78.300	Xiphophorus_couchianus
ENSOMEG00000008989	lrrc47	99	77.477	ENSXMAG00000019386	lrrc47	99	78.286	Xiphophorus_maculatus