EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000008998 (Gene tree)
Gene ID: 112154572
Gene Symbol: xrcc6
Alias: -
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 9710 bases
Position: chrNVQA01000018.1:451170-460879
Accession: 112154572
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000007846	SAP	PF02037.27	4.8e-09	1	1
ENSOMEP00000026882	SAP	PF02037.27	5.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000003440	-	3259	-	ENSOMEP00000007846	587 (aa)	-	-
ENSOMET00000003405	-	3331	-	ENSOMEP00000026882	611 (aa)	XP_024141382	UPI000CF813FB

Gene Model

Click here to download ENSOMEG00000008998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000008998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000008998	xrcc6	99	54.812	ENSG00000196419	XRCC6	99	54.812	Homo_sapiens
ENSOMEG00000008998	xrcc6	99	85.738	ENSAPOG00000012704	xrcc6	100	85.738	Acanthochromis_polyacanthus
ENSOMEG00000008998	xrcc6	100	85.597	ENSACIG00000021277	xrcc6	100	85.597	Amphilophus_citrinellus
ENSOMEG00000008998	xrcc6	100	86.579	ENSAOCG00000021344	xrcc6	100	86.579	Amphiprion_ocellaris
ENSOMEG00000008998	xrcc6	100	86.579	ENSAPEG00000020712	xrcc6	100	86.579	Amphiprion_percula
ENSOMEG00000008998	xrcc6	100	84.943	ENSATEG00000007119	xrcc6	100	84.943	Anabas_testudineus
ENSOMEG00000008998	xrcc6	89	60.329	ENSAPLG00000004469	XRCC6	98	60.329	Anas_platyrhynchos
ENSOMEG00000008998	xrcc6	99	54.812	ENSANAG00000018684	XRCC6	98	55.861	Aotus_nancymaae
ENSOMEG00000008998	xrcc6	99	48.033	ENSANAG00000020017	-	99	47.869	Aotus_nancymaae
ENSOMEG00000008998	xrcc6	99	48.613	ENSANAG00000035230	-	99	48.287	Aotus_nancymaae
ENSOMEG00000008998	xrcc6	99	46.677	ENSANAG00000023445	-	99	46.602	Aotus_nancymaae
ENSOMEG00000008998	xrcc6	100	85.434	ENSACLG00000018608	xrcc6	100	85.434	Astatotilapia_calliptera
ENSOMEG00000008998	xrcc6	99	76.683	ENSAMXG00000007545	xrcc6	99	76.683	Astyanax_mexicanus
ENSOMEG00000008998	xrcc6	99	54.812	ENSCJAG00000045512	XRCC6	99	54.649	Callithrix_jacchus
ENSOMEG00000008998	xrcc6	99	53.670	ENSTSYG00000011348	XRCC6	99	53.834	Carlito_syrichta
ENSOMEG00000008998	xrcc6	99	51.876	ENSCCAG00000030041	-	95	51.550	Cebus_capucinus
ENSOMEG00000008998	xrcc6	99	45.410	ENSCCAG00000037663	-	97	45.246	Cebus_capucinus
ENSOMEG00000008998	xrcc6	93	53.106	ENSCCAG00000030468	-	99	52.964	Cebus_capucinus
ENSOMEG00000008998	xrcc6	99	45.890	ENSCCAG00000035711	-	99	45.890	Cebus_capucinus
ENSOMEG00000008998	xrcc6	99	54.976	ENSCATG00000042366	XRCC6	99	54.976	Cercocebus_atys
ENSOMEG00000008998	xrcc6	99	55.392	ENSCLAG00000016669	XRCC6	99	55.065	Chinchilla_lanigera
ENSOMEG00000008998	xrcc6	99	54.976	ENSCSAG00000005784	XRCC6	99	54.976	Chlorocebus_sabaeus
ENSOMEG00000008998	xrcc6	99	59.770	ENSCPBG00000020535	XRCC6	99	59.442	Chrysemys_picta_bellii
ENSOMEG00000008998	xrcc6	98	35.940	ENSCING00000000633	-	95	36.021	Ciona_intestinalis
ENSOMEG00000008998	xrcc6	99	54.976	ENSCANG00000031032	XRCC6	99	54.976	Colobus_angolensis_palliatus
ENSOMEG00000008998	xrcc6	99	51.809	ENSCGRG00001019029	Xrcc6	99	51.809	Cricetulus_griseus_chok1gshd
ENSOMEG00000008998	xrcc6	99	56.086	ENSCGRG00000001528	Xrcc6	99	56.086	Cricetulus_griseus_crigri
ENSOMEG00000008998	xrcc6	100	79.051	ENSCSEG00000020434	xrcc6	100	79.051	Cynoglossus_semilaevis
ENSOMEG00000008998	xrcc6	100	83.470	ENSCVAG00000002189	xrcc6	100	83.470	Cyprinodon_variegatus
ENSOMEG00000008998	xrcc6	99	75.205	ENSDARG00000071551	xrcc6	99	75.205	Danio_rerio
ENSOMEG00000008998	xrcc6	81	52.308	ENSETEG00000015333	-	67	51.214	Echinops_telfairi
ENSOMEG00000008998	xrcc6	99	53.431	ENSEASG00005001514	XRCC6	99	53.595	Equus_asinus_asinus
ENSOMEG00000008998	xrcc6	99	53.595	ENSECAG00000017563	XRCC6	99	53.710	Equus_caballus
ENSOMEG00000008998	xrcc6	100	75.450	ENSELUG00000020301	xrcc6	100	75.450	Esox_lucius
ENSOMEG00000008998	xrcc6	99	59.054	ENSFALG00000011908	XRCC6	96	58.891	Ficedula_albicollis
ENSOMEG00000008998	xrcc6	100	84.779	ENSFHEG00000016833	xrcc6	100	84.779	Fundulus_heteroclitus
ENSOMEG00000008998	xrcc6	99	67.967	ENSGMOG00000013524	xrcc6	100	67.805	Gadus_morhua
ENSOMEG00000008998	xrcc6	96	61.905	ENSGALG00000011932	XRCC6	99	58.958	Gallus_gallus
ENSOMEG00000008998	xrcc6	100	81.178	ENSGAFG00000008130	xrcc6	100	81.178	Gambusia_affinis
ENSOMEG00000008998	xrcc6	99	83.550	ENSGACG00000004868	xrcc6	99	83.550	Gasterosteus_aculeatus
ENSOMEG00000008998	xrcc6	99	59.442	ENSGAGG00000017518	XRCC6	99	59.113	Gopherus_agassizii
ENSOMEG00000008998	xrcc6	99	54.812	ENSGGOG00000015885	XRCC6	99	54.812	Gorilla_gorilla
ENSOMEG00000008998	xrcc6	93	85.538	ENSHBUG00000023281	xrcc6	100	85.538	Haplochromis_burtoni
ENSOMEG00000008998	xrcc6	99	55.319	ENSHGLG00000018078	XRCC6	99	55.155	Heterocephalus_glaber_female
ENSOMEG00000008998	xrcc6	99	55.319	ENSHGLG00100011264	XRCC6	99	55.155	Heterocephalus_glaber_male
ENSOMEG00000008998	xrcc6	100	77.578	ENSHCOG00000009821	xrcc6	100	77.578	Hippocampus_comes
ENSOMEG00000008998	xrcc6	99	77.340	ENSIPUG00000000767	xrcc6	99	77.340	Ictalurus_punctatus
ENSOMEG00000008998	xrcc6	99	54.649	ENSSTOG00000009490	XRCC6	99	53.922	Ictidomys_tridecemlineatus
ENSOMEG00000008998	xrcc6	99	51.067	ENSJJAG00000017136	Xrcc6	99	51.560	Jaculus_jaculus
ENSOMEG00000008998	xrcc6	99	85.410	ENSKMAG00000002141	xrcc6	99	85.410	Kryptolebias_marmoratus
ENSOMEG00000008998	xrcc6	99	83.251	ENSLBEG00000002691	xrcc6	99	83.251	Labrus_bergylta
ENSOMEG00000008998	xrcc6	83	70.297	ENSLOCG00000011533	xrcc6	99	70.297	Lepisosteus_oculatus
ENSOMEG00000008998	xrcc6	99	54.976	ENSMFAG00000003352	XRCC6	99	54.976	Macaca_fascicularis
ENSOMEG00000008998	xrcc6	99	54.976	ENSMMUG00000001856	XRCC6	99	54.976	Macaca_mulatta
ENSOMEG00000008998	xrcc6	99	54.976	ENSMNEG00000035076	XRCC6	99	54.976	Macaca_nemestrina
ENSOMEG00000008998	xrcc6	99	54.976	ENSMLEG00000019869	XRCC6	99	54.976	Mandrillus_leucophaeus
ENSOMEG00000008998	xrcc6	100	82.651	ENSMAMG00000003368	xrcc6	100	82.651	Mastacembelus_armatus
ENSOMEG00000008998	xrcc6	96	82.794	ENSMAMG00000003405	xrcc6	97	82.906	Mastacembelus_armatus
ENSOMEG00000008998	xrcc6	100	85.270	ENSMZEG00005028080	xrcc6	100	85.270	Maylandia_zebra
ENSOMEG00000008998	xrcc6	99	58.795	ENSMGAG00000012146	XRCC6	99	58.795	Meleagris_gallopavo
ENSOMEG00000008998	xrcc6	99	56.250	ENSMAUG00000017340	Xrcc6	99	56.250	Mesocricetus_auratus
ENSOMEG00000008998	xrcc6	99	56.650	ENSMOCG00000015717	Xrcc6	99	56.250	Microtus_ochrogaster
ENSOMEG00000008998	xrcc6	100	81.342	ENSMMOG00000003536	xrcc6	99	81.342	Mola_mola
ENSOMEG00000008998	xrcc6	100	84.124	ENSMALG00000013912	xrcc6	95	84.124	Monopterus_albus
ENSOMEG00000008998	xrcc6	99	54.085	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.682	Mus_caroli
ENSOMEG00000008998	xrcc6	99	57.190	ENSMUSG00000022471	Xrcc6	99	57.576	Mus_musculus
ENSOMEG00000008998	xrcc6	99	57.026	MGP_PahariEiJ_G0020069	Xrcc6	99	56.628	Mus_pahari
ENSOMEG00000008998	xrcc6	96	57.265	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.192	Mus_spretus
ENSOMEG00000008998	xrcc6	99	54.770	ENSNGAG00000013750	Xrcc6	99	54.770	Nannospalax_galili
ENSOMEG00000008998	xrcc6	100	85.761	ENSNBRG00000004125	xrcc6	100	85.761	Neolamprologus_brichardi
ENSOMEG00000008998	xrcc6	95	56.048	ENSOPRG00000002386	XRCC6	99	55.973	Ochotona_princeps
ENSOMEG00000008998	xrcc6	99	54.085	ENSODEG00000015847	XRCC6	99	54.412	Octodon_degus
ENSOMEG00000008998	xrcc6	100	85.434	ENSONIG00000019715	xrcc6	100	85.434	Oreochromis_niloticus
ENSOMEG00000008998	xrcc6	70	59.233	ENSOANG00000011328	XRCC6	98	59.233	Ornithorhynchus_anatinus
ENSOMEG00000008998	xrcc6	99	54.886	ENSOCUG00000006948	XRCC6	99	55.049	Oryctolagus_cuniculus
ENSOMEG00000008998	xrcc6	100	94.108	ENSORLG00020007820	xrcc6	100	94.108	Oryzias_latipes_hni
ENSOMEG00000008998	xrcc6	100	93.944	ENSORLG00015006406	xrcc6	100	93.944	Oryzias_latipes_hsok
ENSOMEG00000008998	xrcc6	99	55.065	ENSOGAG00000008821	XRCC6	99	54.739	Otolemur_garnettii
ENSOMEG00000008998	xrcc6	92	54.743	ENSPPAG00000037167	XRCC6	99	54.743	Pan_paniscus
ENSOMEG00000008998	xrcc6	99	54.812	ENSPTRG00000045824	XRCC6	99	55.651	Pan_troglodytes
ENSOMEG00000008998	xrcc6	99	54.812	ENSPTRG00000022548	XRCC6	99	55.651	Pan_troglodytes
ENSOMEG00000008998	xrcc6	99	54.812	ENSPANG00000001252	XRCC6	99	57.082	Papio_anubis
ENSOMEG00000008998	xrcc6	99	72.250	ENSPKIG00000003974	xrcc6	99	72.250	Paramormyrops_kingsleyae
ENSOMEG00000008998	xrcc6	99	80.100	ENSPMGG00000014220	xrcc6	100	80.100	Periophthalmus_magnuspinnatus
ENSOMEG00000008998	xrcc6	99	55.263	ENSPEMG00000023446	Xrcc6	99	55.263	Peromyscus_maniculatus_bairdii
ENSOMEG00000008998	xrcc6	99	57.259	ENSPCIG00000026409	XRCC6	99	57.401	Phascolarctos_cinereus
ENSOMEG00000008998	xrcc6	100	83.633	ENSPFOG00000017173	xrcc6	100	83.633	Poecilia_formosa
ENSOMEG00000008998	xrcc6	100	83.142	ENSPLAG00000000562	xrcc6	100	83.142	Poecilia_latipinna
ENSOMEG00000008998	xrcc6	100	83.797	ENSPMEG00000018478	xrcc6	100	83.797	Poecilia_mexicana
ENSOMEG00000008998	xrcc6	100	82.353	ENSPREG00000020957	xrcc6	93	82.353	Poecilia_reticulata
ENSOMEG00000008998	xrcc6	99	49.266	ENSPPYG00000011876	XRCC6	99	49.266	Pongo_abelii
ENSOMEG00000008998	xrcc6	99	53.846	ENSPVAG00000001168	XRCC6	99	53.519	Pteropus_vampyrus
ENSOMEG00000008998	xrcc6	100	85.270	ENSPNYG00000003815	xrcc6	100	81.153	Pundamilia_nyererei
ENSOMEG00000008998	xrcc6	99	56.209	ENSRNOG00000006392	Xrcc6	99	55.810	Rattus_norvegicus
ENSOMEG00000008998	xrcc6	99	50.897	ENSRBIG00000039794	XRCC6	98	52.509	Rhinopithecus_bieti
ENSOMEG00000008998	xrcc6	99	54.976	ENSRROG00000030297	XRCC6	99	54.976	Rhinopithecus_roxellana
ENSOMEG00000008998	xrcc6	70	49.756	ENSSBOG00000024724	-	99	49.756	Saimiri_boliviensis_boliviensis
ENSOMEG00000008998	xrcc6	99	56.149	ENSSHAG00000010790	XRCC6	99	56.281	Sarcophilus_harrisii
ENSOMEG00000008998	xrcc6	99	74.713	ENSSFOG00015014409	xrcc6	99	74.713	Scleropages_formosus
ENSOMEG00000008998	xrcc6	100	85.925	ENSSMAG00000006496	xrcc6	100	85.925	Scophthalmus_maximus
ENSOMEG00000008998	xrcc6	100	85.106	ENSSDUG00000007542	xrcc6	100	85.106	Seriola_dumerili
ENSOMEG00000008998	xrcc6	100	84.615	ENSSLDG00000009974	xrcc6	100	84.615	Seriola_lalandi_dorsalis
ENSOMEG00000008998	xrcc6	99	58.891	ENSSPUG00000012086	XRCC6	99	58.564	Sphenodon_punctatus
ENSOMEG00000008998	xrcc6	100	86.252	ENSSPAG00000015199	xrcc6	100	86.252	Stegastes_partitus
ENSOMEG00000008998	xrcc6	95	59.932	ENSTGUG00000009852	-	94	60.241	Taeniopygia_guttata
ENSOMEG00000008998	xrcc6	99	77.049	ENSTRUG00000017070	xrcc6	99	77.541	Takifugu_rubripes
ENSOMEG00000008998	xrcc6	96	76.858	ENSTNIG00000012947	xrcc6	99	76.988	Tetraodon_nigroviridis
ENSOMEG00000008998	xrcc6	96	51.795	ENSTBEG00000011736	XRCC6	99	51.712	Tupaia_belangeri
ENSOMEG00000008998	xrcc6	90	52.960	ENSTTRG00000006749	XRCC6	90	52.960	Tursiops_truncatus
ENSOMEG00000008998	xrcc6	100	82.815	ENSXMAG00000009691	xrcc6	100	82.815	Xiphophorus_maculatus