EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000009066 (Gene tree)
Gene ID: 112150316
Gene Symbol: safb
Alias: -
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 13007 bases
Position: chrNVQA01000014.1:17940711-17953717
Accession: 112150316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000007919	RRM_1	PF00076.22	7.2e-14	1	1
ENSOMEP00000007919	SAP	PF02037.27	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000003308	-	3150	XM_024278526	ENSOMEP00000007919	807 (aa)	XP_024134294	UPI000CF7C45B

Gene Model

Click here to download ENSOMEG00000009066's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000009066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000009066	safb	67	39.652	ENSG00000160633	SAFB	78	62.810	Homo_sapiens
ENSOMEG00000009066	safb	100	77.563	ENSAPOG00000022508	safb	100	77.925	Acanthochromis_polyacanthus
ENSOMEG00000009066	safb	100	69.613	ENSACIG00000006247	safb	100	70.182	Amphilophus_citrinellus
ENSOMEG00000009066	safb	95	77.020	ENSAOCG00000006308	safb	99	76.628	Amphiprion_ocellaris
ENSOMEG00000009066	safb	100	77.108	ENSAPEG00000023342	safb	100	77.229	Amphiprion_percula
ENSOMEG00000009066	safb	100	74.791	ENSATEG00000004998	safb	100	75.508	Anabas_testudineus
ENSOMEG00000009066	safb	60	41.788	ENSAPLG00000006355	-	96	47.414	Anas_platyrhynchos
ENSOMEG00000009066	safb	61	39.649	ENSAPLG00000005780	-	98	43.249	Anas_platyrhynchos
ENSOMEG00000009066	safb	67	40.254	ENSANAG00000028821	SAFB	95	39.716	Aotus_nancymaae
ENSOMEG00000009066	safb	100	72.356	ENSACLG00000001926	safb	100	72.356	Astatotilapia_calliptera
ENSOMEG00000009066	safb	97	57.558	ENSAMXG00000018154	safb	99	58.971	Astyanax_mexicanus
ENSOMEG00000009066	safb	59	48.763	ENSBTAG00000007875	SAFB	94	39.474	Bos_taurus
ENSOMEG00000009066	safb	59	48.763	ENSCHIG00000007262	SAFB	94	39.537	Capra_hircus
ENSOMEG00000009066	safb	57	41.243	ENSTSYG00000001851	-	89	41.616	Carlito_syrichta
ENSOMEG00000009066	safb	65	40.397	ENSCCAG00000020193	SAFB	95	39.451	Cebus_capucinus
ENSOMEG00000009066	safb	67	39.810	ENSCATG00000029994	SAFB	95	39.009	Cercocebus_atys
ENSOMEG00000009066	safb	67	39.810	ENSCSAG00000009949	SAFB	95	39.009	Chlorocebus_sabaeus
ENSOMEG00000009066	safb	88	45.116	ENSCPBG00000010936	-	96	44.994	Chrysemys_picta_bellii
ENSOMEG00000009066	safb	92	42.693	ENSCPBG00000010928	-	92	45.018	Chrysemys_picta_bellii
ENSOMEG00000009066	safb	95	33.637	ENSCANG00000004774	-	60	64.706	Colobus_angolensis_palliatus
ENSOMEG00000009066	safb	98	40.337	ENSCANG00000019754	-	92	39.198	Colobus_angolensis_palliatus
ENSOMEG00000009066	safb	99	64.576	ENSCSEG00000019870	safb	99	64.699	Cynoglossus_semilaevis
ENSOMEG00000009066	safb	100	65.968	ENSCVAG00000002226	safb	100	65.845	Cyprinodon_variegatus
ENSOMEG00000009066	safb	96	57.637	ENSDARG00000020467	safb	100	57.241	Danio_rerio
ENSOMEG00000009066	safb	67	41.120	ENSDNOG00000015746	SAFB	95	37.951	Dasypus_novemcinctus
ENSOMEG00000009066	safb	65	38.898	ENSEASG00005023019	SAFB	95	39.608	Equus_asinus_asinus
ENSOMEG00000009066	safb	99	60.669	ENSELUG00000022327	safb	99	60.323	Esox_lucius
ENSOMEG00000009066	safb	67	39.432	ENSFCAG00000011835	SAFB	93	39.282	Felis_catus
ENSOMEG00000009066	safb	57	39.785	ENSFALG00000013881	-	92	44.322	Ficedula_albicollis
ENSOMEG00000009066	safb	65	43.709	ENSFALG00000013882	-	87	44.505	Ficedula_albicollis
ENSOMEG00000009066	safb	100	67.897	ENSFHEG00000004219	safb	100	68.635	Fundulus_heteroclitus
ENSOMEG00000009066	safb	100	63.658	ENSGMOG00000014280	safb	100	64.014	Gadus_morhua
ENSOMEG00000009066	safb	65	43.471	ENSGALG00000001948	-	90	47.463	Gallus_gallus
ENSOMEG00000009066	safb	66	43.863	ENSGALG00000013365	-	96	44.809	Gallus_gallus
ENSOMEG00000009066	safb	100	65.362	ENSGAFG00000016162	safb	100	65.558	Gambusia_affinis
ENSOMEG00000009066	safb	100	68.224	ENSGACG00000011385	safb	100	68.575	Gasterosteus_aculeatus
ENSOMEG00000009066	safb	66	47.934	ENSGAGG00000017702	-	95	50.241	Gopherus_agassizii
ENSOMEG00000009066	safb	95	48.169	ENSGAGG00000008424	-	94	48.747	Gopherus_agassizii
ENSOMEG00000009066	safb	67	39.810	ENSGGOG00000015109	SAFB	95	39.560	Gorilla_gorilla
ENSOMEG00000009066	safb	100	63.869	ENSHBUG00000009218	safb	100	66.910	Haplochromis_burtoni
ENSOMEG00000009066	safb	94	64.249	ENSHCOG00000001705	safb	99	65.459	Hippocampus_comes
ENSOMEG00000009066	safb	100	58.565	ENSIPUG00000024869	safb2	100	59.907	Ictalurus_punctatus
ENSOMEG00000009066	safb	100	75.937	ENSKMAG00000022308	safb	100	76.300	Kryptolebias_marmoratus
ENSOMEG00000009066	safb	100	73.168	ENSLBEG00000006015	safb	100	73.168	Labrus_bergylta
ENSOMEG00000009066	safb	66	41.667	ENSLACG00000018090	SAFB	98	47.014	Latimeria_chalumnae
ENSOMEG00000009066	safb	98	60.093	ENSLOCG00000003613	safb	99	60.885	Lepisosteus_oculatus
ENSOMEG00000009066	safb	65	41.626	ENSLAFG00000003840	SAFB	96	40.713	Loxodonta_africana
ENSOMEG00000009066	safb	65	39.773	ENSMFAG00000003885	SAFB	95	39.046	Macaca_fascicularis
ENSOMEG00000009066	safb	95	41.796	ENSMMUG00000017970	SAFB	95	41.376	Macaca_mulatta
ENSOMEG00000009066	safb	67	38.924	ENSMNEG00000035637	SAFB	95	38.696	Macaca_nemestrina
ENSOMEG00000009066	safb	66	37.825	ENSMLEG00000038637	SAFB	95	38.090	Mandrillus_leucophaeus
ENSOMEG00000009066	safb	100	75.478	ENSMAMG00000003357	safb	91	75.239	Mastacembelus_armatus
ENSOMEG00000009066	safb	100	74.017	ENSMZEG00005009120	safb	100	73.897	Maylandia_zebra
ENSOMEG00000009066	safb	64	40.572	ENSMGAG00000001101	-	98	43.875	Meleagris_gallopavo
ENSOMEG00000009066	safb	65	44.828	ENSMGAG00000001051	-	96	47.215	Meleagris_gallopavo
ENSOMEG00000009066	safb	85	36.223	ENSMICG00000046795	-	82	59.036	Microcebus_murinus
ENSOMEG00000009066	safb	65	40.759	ENSMICG00000008739	-	93	39.934	Microcebus_murinus
ENSOMEG00000009066	safb	94	41.731	ENSMODG00000001236	SAFB	95	39.978	Monodelphis_domestica
ENSOMEG00000009066	safb	100	73.491	ENSMALG00000020330	safb	100	73.254	Monopterus_albus
ENSOMEG00000009066	safb	98	41.050	ENSMLUG00000001081	SAFB	95	38.049	Myotis_lucifugus
ENSOMEG00000009066	safb	67	39.968	ENSNLEG00000013551	SAFB	97	38.724	Nomascus_leucogenys
ENSOMEG00000009066	safb	100	73.484	ENSONIG00000002318	safb	100	73.603	Oreochromis_niloticus
ENSOMEG00000009066	safb	85	36.983	ENSOCUG00000014628	SAFB	97	36.310	Oryctolagus_cuniculus
ENSOMEG00000009066	safb	98	91.436	ENSORLG00000016989	safb	100	90.764	Oryzias_latipes
ENSOMEG00000009066	safb	98	81.132	ENSORLG00020000404	safb	100	79.459	Oryzias_latipes_hni
ENSOMEG00000009066	safb	98	91.184	ENSORLG00015010733	safb	100	90.741	Oryzias_latipes_hsok
ENSOMEG00000009066	safb	65	40.492	ENSOGAG00000027769	SAFB	95	38.889	Otolemur_garnettii
ENSOMEG00000009066	safb	59	43.540	ENSOARG00000007662	-	94	38.419	Ovis_aries
ENSOMEG00000009066	safb	65	39.737	ENSPPAG00000035129	SAFB	95	39.394	Pan_paniscus
ENSOMEG00000009066	safb	67	39.432	ENSPPRG00000017197	SAFB	93	39.282	Panthera_pardus
ENSOMEG00000009066	safb	65	39.448	ENSPTRG00000010335	SAFB	95	39.394	Pan_troglodytes
ENSOMEG00000009066	safb	65	40.000	ENSPANG00000007770	SAFB	95	39.046	Papio_anubis
ENSOMEG00000009066	safb	99	59.389	ENSPKIG00000009902	safb	99	60.068	Paramormyrops_kingsleyae
ENSOMEG00000009066	safb	98	45.119	ENSPSIG00000011679	-	92	47.831	Pelodiscus_sinensis
ENSOMEG00000009066	safb	98	44.115	ENSPSIG00000009367	-	96	45.374	Pelodiscus_sinensis
ENSOMEG00000009066	safb	57	47.514	ENSPCIG00000009504	-	95	47.401	Phascolarctos_cinereus
ENSOMEG00000009066	safb	100	68.505	ENSPFOG00000007745	safb	100	68.505	Poecilia_formosa
ENSOMEG00000009066	safb	100	65.100	ENSPLAG00000001614	safb	100	65.610	Poecilia_latipinna
ENSOMEG00000009066	safb	100	68.382	ENSPMEG00000021023	safb	100	68.382	Poecilia_mexicana
ENSOMEG00000009066	safb	100	66.466	ENSPREG00000012496	safb	100	67.108	Poecilia_reticulata
ENSOMEG00000009066	safb	67	39.652	ENSPPYG00000009428	SAFB	95	38.877	Pongo_abelii
ENSOMEG00000009066	safb	65	37.194	ENSPCAG00000006475	SAFB	95	37.351	Procavia_capensis
ENSOMEG00000009066	safb	96	40.312	ENSPCOG00000014090	SAFB	93	38.840	Propithecus_coquereli
ENSOMEG00000009066	safb	70	53.636	ENSPVAG00000004913	SAFB	67	53.636	Pteropus_vampyrus
ENSOMEG00000009066	safb	99	58.998	ENSPNAG00000021838	safb	99	60.845	Pygocentrus_nattereri
ENSOMEG00000009066	safb	65	41.156	ENSRBIG00000042509	SAFB	86	40.281	Rhinopithecus_bieti
ENSOMEG00000009066	safb	65	40.097	ENSRROG00000029278	SAFB	95	39.154	Rhinopithecus_roxellana
ENSOMEG00000009066	safb	67	38.959	ENSSBOG00000026291	SAFB	95	38.536	Saimiri_boliviensis_boliviensis
ENSOMEG00000009066	safb	99	57.652	ENSSFOG00015008156	safb	99	58.824	Scleropages_formosus
ENSOMEG00000009066	safb	100	73.333	ENSSMAG00000009316	safb	100	73.810	Scophthalmus_maximus
ENSOMEG00000009066	safb	100	72.323	ENSSDUG00000009652	safb	100	73.045	Seriola_dumerili
ENSOMEG00000009066	safb	100	74.639	ENSSLDG00000001670	safb	100	75.962	Seriola_lalandi_dorsalis
ENSOMEG00000009066	safb	60	38.272	ENSSARG00000010475	SAFB	98	37.225	Sorex_araneus
ENSOMEG00000009066	safb	52	40.000	ENSSPUG00000009820	-	94	44.961	Sphenodon_punctatus
ENSOMEG00000009066	safb	54	39.961	ENSSPUG00000009747	-	96	40.661	Sphenodon_punctatus
ENSOMEG00000009066	safb	98	71.236	ENSSPAG00000015682	safb	98	71.114	Stegastes_partitus
ENSOMEG00000009066	safb	64	43.212	ENSTGUG00000000489	-	96	45.949	Taeniopygia_guttata
ENSOMEG00000009066	safb	65	42.951	ENSTGUG00000000502	-	94	45.455	Taeniopygia_guttata
ENSOMEG00000009066	safb	100	72.115	ENSTRUG00000003567	safb	100	71.875	Takifugu_rubripes
ENSOMEG00000009066	safb	64	75.000	ENSTTRG00000013588	SAFB	60	75.000	Tursiops_truncatus
ENSOMEG00000009066	safb	65	42.379	ENSXETG00000008755	safb	95	44.900	Xenopus_tropicalis
ENSOMEG00000009066	safb	100	68.627	ENSXMAG00000003458	safb	100	68.750	Xiphophorus_maculatus