EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000009167 (Gene tree)
Gene ID: 112152742
Gene Symbol: prpf18
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 10327 bases
Position: chrNVQA01000016.1:12879233-12889559
Accession: 112152742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000007990	PRP4	PF08799.11	2.9e-13	1	1
ENSOMEP00000007990	Prp18	PF02840.15	1.3e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000003185	-	5481	-	ENSOMEP00000007990	341 (aa)	XP_024138279	UPI000CF7C598

Gene Model

Click here to download ENSOMEG00000009167's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000009167's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000009167	prpf18	100	85.673	ENSG00000165630	PRPF18	100	85.673	Homo_sapiens
ENSOMEG00000009167	prpf18	100	95.894	ENSAPOG00000024177	prpf18	100	95.894	Acanthochromis_polyacanthus
ENSOMEG00000009167	prpf18	100	85.088	ENSAMEG00000013591	-	100	85.088	Ailuropoda_melanoleuca
ENSOMEG00000009167	prpf18	100	94.721	ENSACIG00000001186	prpf18	100	94.721	Amphilophus_citrinellus
ENSOMEG00000009167	prpf18	98	95.509	ENSAOCG00000006572	prpf18	94	92.982	Amphiprion_ocellaris
ENSOMEG00000009167	prpf18	100	95.601	ENSAPEG00000004564	prpf18	100	95.601	Amphiprion_percula
ENSOMEG00000009167	prpf18	100	94.135	ENSATEG00000000303	prpf18	100	94.135	Anabas_testudineus
ENSOMEG00000009167	prpf18	99	83.235	ENSAPLG00000003387	-	99	83.235	Anas_platyrhynchos
ENSOMEG00000009167	prpf18	100	85.756	ENSACAG00000000818	-	100	85.756	Anolis_carolinensis
ENSOMEG00000009167	prpf18	100	85.380	ENSANAG00000037445	-	100	85.380	Aotus_nancymaae
ENSOMEG00000009167	prpf18	100	94.135	ENSACLG00000026296	prpf18	100	94.135	Astatotilapia_calliptera
ENSOMEG00000009167	prpf18	100	88.571	ENSAMXG00000012848	prpf18	100	88.571	Astyanax_mexicanus
ENSOMEG00000009167	prpf18	100	84.795	ENSBTAG00000017244	PRPF18	100	84.795	Bos_taurus
ENSOMEG00000009167	prpf18	98	40.058	WBGene00009320	F32B6.3	97	39.769	Caenorhabditis_elegans
ENSOMEG00000009167	prpf18	100	85.380	ENSCJAG00000009432	-	100	85.380	Callithrix_jacchus
ENSOMEG00000009167	prpf18	100	85.088	ENSCAFG00000004735	-	100	85.088	Canis_familiaris
ENSOMEG00000009167	prpf18	100	85.088	ENSCAFG00020007712	-	100	85.088	Canis_lupus_dingo
ENSOMEG00000009167	prpf18	100	84.795	ENSCHIG00000000499	-	100	84.795	Capra_hircus
ENSOMEG00000009167	prpf18	100	84.795	ENSTSYG00000003517	-	100	84.795	Carlito_syrichta
ENSOMEG00000009167	prpf18	100	85.673	ENSCPOG00000021069	-	100	85.673	Cavia_porcellus
ENSOMEG00000009167	prpf18	100	85.380	ENSCCAG00000036822	-	100	85.380	Cebus_capucinus
ENSOMEG00000009167	prpf18	100	74.854	ENSCATG00000016633	-	100	74.854	Cercocebus_atys
ENSOMEG00000009167	prpf18	100	85.088	ENSCLAG00000011770	-	100	85.088	Chinchilla_lanigera
ENSOMEG00000009167	prpf18	100	83.476	ENSCSAG00000013109	-	100	83.476	Chlorocebus_sabaeus
ENSOMEG00000009167	prpf18	100	80.899	ENSCPBG00000003100	-	100	81.742	Chrysemys_picta_bellii
ENSOMEG00000009167	prpf18	99	55.588	ENSCING00000020481	-	97	54.493	Ciona_intestinalis
ENSOMEG00000009167	prpf18	99	55.523	ENSCSAVG00000010546	-	99	54.839	Ciona_savignyi
ENSOMEG00000009167	prpf18	100	85.673	ENSCANG00000034900	-	100	85.673	Colobus_angolensis_palliatus
ENSOMEG00000009167	prpf18	100	85.088	ENSCGRG00001023665	Prpf18	100	85.088	Cricetulus_griseus_chok1gshd
ENSOMEG00000009167	prpf18	100	85.088	ENSCGRG00000014690	Prpf18	100	85.088	Cricetulus_griseus_crigri
ENSOMEG00000009167	prpf18	100	91.202	ENSCSEG00000005536	prpf18	99	91.202	Cynoglossus_semilaevis
ENSOMEG00000009167	prpf18	100	92.375	ENSCVAG00000012401	prpf18	100	92.375	Cyprinodon_variegatus
ENSOMEG00000009167	prpf18	100	90.058	ENSDARG00000058306	prpf18	100	90.058	Danio_rerio
ENSOMEG00000009167	prpf18	100	85.380	ENSDNOG00000035607	-	100	85.380	Dasypus_novemcinctus
ENSOMEG00000009167	prpf18	100	84.795	ENSDORG00000000858	Prpf18	100	84.795	Dipodomys_ordii
ENSOMEG00000009167	prpf18	99	52.071	FBgn0027784	Prp18	98	52.071	Drosophila_melanogaster
ENSOMEG00000009167	prpf18	100	76.608	ENSETEG00000015060	-	100	76.608	Echinops_telfairi
ENSOMEG00000009167	prpf18	100	70.893	ENSEBUG00000016502	prpf18	99	69.942	Eptatretus_burgeri
ENSOMEG00000009167	prpf18	100	85.380	ENSEASG00005019373	-	100	85.380	Equus_asinus_asinus
ENSOMEG00000009167	prpf18	100	85.380	ENSECAG00000006997	PRPF18	100	85.380	Equus_caballus
ENSOMEG00000009167	prpf18	92	51.582	ENSEEUG00000001171	-	100	51.582	Erinaceus_europaeus
ENSOMEG00000009167	prpf18	100	88.630	ENSELUG00000022190	prpf18	100	88.630	Esox_lucius
ENSOMEG00000009167	prpf18	100	84.795	ENSFCAG00000004436	-	100	84.795	Felis_catus
ENSOMEG00000009167	prpf18	92	80.615	ENSFALG00000001912	-	97	80.615	Ficedula_albicollis
ENSOMEG00000009167	prpf18	94	87.500	ENSFDAG00000014026	-	100	87.500	Fukomys_damarensis
ENSOMEG00000009167	prpf18	99	56.812	ENSFDAG00000010713	-	97	56.812	Fukomys_damarensis
ENSOMEG00000009167	prpf18	80	94.505	ENSFHEG00000020125	prpf18	98	94.382	Fundulus_heteroclitus
ENSOMEG00000009167	prpf18	99	87.059	ENSGMOG00000012210	prpf18	99	87.059	Gadus_morhua
ENSOMEG00000009167	prpf18	100	84.211	ENSGALG00000043593	-	100	84.211	Gallus_gallus
ENSOMEG00000009167	prpf18	100	91.496	ENSGAFG00000006034	prpf18	100	91.496	Gambusia_affinis
ENSOMEG00000009167	prpf18	100	89.736	ENSGACG00000012232	prpf18	100	89.736	Gasterosteus_aculeatus
ENSOMEG00000009167	prpf18	100	84.795	ENSGAGG00000016878	-	100	84.795	Gopherus_agassizii
ENSOMEG00000009167	prpf18	92	84.494	ENSGGOG00000025188	-	96	84.494	Gorilla_gorilla
ENSOMEG00000009167	prpf18	100	94.135	ENSHBUG00000010264	prpf18	100	94.135	Haplochromis_burtoni
ENSOMEG00000009167	prpf18	100	85.088	ENSHGLG00000018534	PRPF18	100	85.088	Heterocephalus_glaber_female
ENSOMEG00000009167	prpf18	94	87.188	ENSHGLG00100012161	-	98	87.188	Heterocephalus_glaber_male
ENSOMEG00000009167	prpf18	100	93.255	ENSHCOG00000015987	prpf18	100	93.255	Hippocampus_comes
ENSOMEG00000009167	prpf18	100	83.853	ENSIPUG00000007432	prpf18	100	84.419	Ictalurus_punctatus
ENSOMEG00000009167	prpf18	100	84.795	ENSSTOG00000008735	-	100	84.795	Ictidomys_tridecemlineatus
ENSOMEG00000009167	prpf18	100	85.673	ENSJJAG00000024041	-	100	85.673	Jaculus_jaculus
ENSOMEG00000009167	prpf18	100	63.557	ENSJJAG00000015191	-	100	63.557	Jaculus_jaculus
ENSOMEG00000009167	prpf18	100	92.962	ENSKMAG00000012124	prpf18	100	92.962	Kryptolebias_marmoratus
ENSOMEG00000009167	prpf18	98	88.988	ENSLBEG00000028466	prpf18	99	88.988	Labrus_bergylta
ENSOMEG00000009167	prpf18	100	84.795	ENSLACG00000009885	prpf18	100	85.380	Latimeria_chalumnae
ENSOMEG00000009167	prpf18	100	88.304	ENSLOCG00000016736	prpf18	100	88.304	Lepisosteus_oculatus
ENSOMEG00000009167	prpf18	100	85.673	ENSLAFG00000007753	-	100	85.673	Loxodonta_africana
ENSOMEG00000009167	prpf18	100	85.673	ENSMFAG00000000540	-	100	85.673	Macaca_fascicularis
ENSOMEG00000009167	prpf18	100	85.673	ENSMMUG00000015071	PRPF18	93	93.377	Macaca_mulatta
ENSOMEG00000009167	prpf18	100	85.673	ENSMNEG00000024679	-	100	85.673	Macaca_nemestrina
ENSOMEG00000009167	prpf18	100	70.468	ENSMLEG00000031715	-	100	70.468	Mandrillus_leucophaeus
ENSOMEG00000009167	prpf18	100	93.842	ENSMAMG00000006610	prpf18	100	93.842	Mastacembelus_armatus
ENSOMEG00000009167	prpf18	100	94.135	ENSMZEG00005019392	prpf18	100	94.135	Maylandia_zebra
ENSOMEG00000009167	prpf18	100	84.211	ENSMGAG00000005023	-	100	84.211	Meleagris_gallopavo
ENSOMEG00000009167	prpf18	100	85.380	ENSMICG00000006572	-	100	85.380	Microcebus_murinus
ENSOMEG00000009167	prpf18	100	85.673	ENSMOCG00000021468	Prpf18	100	85.673	Microtus_ochrogaster
ENSOMEG00000009167	prpf18	100	93.548	ENSMMOG00000013012	prpf18	100	93.548	Mola_mola
ENSOMEG00000009167	prpf18	96	79.882	ENSMODG00000016902	-	92	79.882	Monodelphis_domestica
ENSOMEG00000009167	prpf18	100	77.193	ENSMODG00000024043	-	100	77.193	Monodelphis_domestica
ENSOMEG00000009167	prpf18	100	85.217	ENSMALG00000005486	prpf18	100	86.705	Monopterus_albus
ENSOMEG00000009167	prpf18	100	85.088	MGP_CAROLIEiJ_G0023143	Prpf18	100	94.521	Mus_caroli
ENSOMEG00000009167	prpf18	100	85.088	ENSMUSG00000039449	Prpf18	100	94.521	Mus_musculus
ENSOMEG00000009167	prpf18	100	85.380	MGP_PahariEiJ_G0019203	Prpf18	100	94.521	Mus_pahari
ENSOMEG00000009167	prpf18	100	84.795	MGP_SPRETEiJ_G0024061	Prpf18	100	94.521	Mus_spretus
ENSOMEG00000009167	prpf18	100	84.795	ENSMPUG00000000938	-	100	84.795	Mustela_putorius_furo
ENSOMEG00000009167	prpf18	100	84.795	ENSMLUG00000009200	-	100	84.795	Myotis_lucifugus
ENSOMEG00000009167	prpf18	68	82.328	ENSNGAG00000023550	-	83	82.328	Nannospalax_galili
ENSOMEG00000009167	prpf18	100	85.673	ENSNGAG00000012500	-	100	85.673	Nannospalax_galili
ENSOMEG00000009167	prpf18	100	94.135	ENSNBRG00000001778	prpf18	100	94.135	Neolamprologus_brichardi
ENSOMEG00000009167	prpf18	100	85.673	ENSNLEG00000012186	-	100	85.673	Nomascus_leucogenys
ENSOMEG00000009167	prpf18	76	73.359	ENSMEUG00000005032	-	75	73.359	Notamacropus_eugenii
ENSOMEG00000009167	prpf18	77	66.038	ENSOPRG00000002153	-	100	66.038	Ochotona_princeps
ENSOMEG00000009167	prpf18	100	85.088	ENSODEG00000003770	-	100	85.088	Octodon_degus
ENSOMEG00000009167	prpf18	98	93.713	ENSONIG00000014854	prpf18	96	93.713	Oreochromis_niloticus
ENSOMEG00000009167	prpf18	100	85.088	ENSOANG00000015404	-	100	85.088	Ornithorhynchus_anatinus
ENSOMEG00000009167	prpf18	100	85.380	ENSOCUG00000027756	-	96	86.239	Oryctolagus_cuniculus
ENSOMEG00000009167	prpf18	100	94.857	ENSORLG00000010293	prpf18	100	94.857	Oryzias_latipes
ENSOMEG00000009167	prpf18	100	97.361	ENSORLG00020001530	prpf18	100	97.361	Oryzias_latipes_hni
ENSOMEG00000009167	prpf18	100	97.067	ENSORLG00015013705	prpf18	100	97.067	Oryzias_latipes_hsok
ENSOMEG00000009167	prpf18	100	84.795	ENSOGAG00000007294	-	100	84.795	Otolemur_garnettii
ENSOMEG00000009167	prpf18	100	82.621	ENSOARG00000006243	-	100	82.621	Ovis_aries
ENSOMEG00000009167	prpf18	100	85.673	ENSPPAG00000041959	-	100	85.673	Pan_paniscus
ENSOMEG00000009167	prpf18	100	84.795	ENSPPRG00000000107	-	100	84.795	Panthera_pardus
ENSOMEG00000009167	prpf18	100	84.795	ENSPTIG00000021094	-	100	84.795	Panthera_tigris_altaica
ENSOMEG00000009167	prpf18	100	85.673	ENSPTRG00000002306	PRPF18	100	85.673	Pan_troglodytes
ENSOMEG00000009167	prpf18	100	85.380	ENSPANG00000023346	-	100	85.380	Papio_anubis
ENSOMEG00000009167	prpf18	100	86.040	ENSPKIG00000014128	prpf18	96	86.040	Paramormyrops_kingsleyae
ENSOMEG00000009167	prpf18	100	84.795	ENSPSIG00000016064	-	100	84.795	Pelodiscus_sinensis
ENSOMEG00000009167	prpf18	100	87.135	ENSPMGG00000016486	prpf18	100	87.135	Periophthalmus_magnuspinnatus
ENSOMEG00000009167	prpf18	100	85.380	ENSPEMG00000013704	Prpf18	100	85.380	Peromyscus_maniculatus_bairdii
ENSOMEG00000009167	prpf18	100	74.640	ENSPMAG00000000204	prpf18	100	74.640	Petromyzon_marinus
ENSOMEG00000009167	prpf18	92	84.494	ENSPCIG00000012963	-	99	84.494	Phascolarctos_cinereus
ENSOMEG00000009167	prpf18	100	89.143	ENSPFOG00000017611	prpf18	100	89.143	Poecilia_formosa
ENSOMEG00000009167	prpf18	100	91.496	ENSPLAG00000000369	prpf18	100	91.496	Poecilia_latipinna
ENSOMEG00000009167	prpf18	100	91.789	ENSPMEG00000005183	prpf18	100	91.789	Poecilia_mexicana
ENSOMEG00000009167	prpf18	100	91.496	ENSPREG00000015232	prpf18	100	91.496	Poecilia_reticulata
ENSOMEG00000009167	prpf18	100	85.380	ENSPPYG00000002101	PRPF18	100	85.380	Pongo_abelii
ENSOMEG00000009167	prpf18	100	67.836	ENSPCAG00000010833	-	100	67.836	Procavia_capensis
ENSOMEG00000009167	prpf18	100	80.702	ENSPCOG00000013057	-	100	80.702	Propithecus_coquereli
ENSOMEG00000009167	prpf18	100	52.047	ENSPVAG00000002947	-	100	52.047	Pteropus_vampyrus
ENSOMEG00000009167	prpf18	100	93.842	ENSPNYG00000003554	prpf18	100	93.842	Pundamilia_nyererei
ENSOMEG00000009167	prpf18	100	87.749	ENSPNAG00000023151	prpf18	100	87.749	Pygocentrus_nattereri
ENSOMEG00000009167	prpf18	100	85.088	ENSRNOG00000018396	Prpf18	100	85.088	Rattus_norvegicus
ENSOMEG00000009167	prpf18	100	85.380	ENSRBIG00000028028	-	100	85.380	Rhinopithecus_bieti
ENSOMEG00000009167	prpf18	100	85.673	ENSRROG00000040695	-	100	85.673	Rhinopithecus_roxellana
ENSOMEG00000009167	prpf18	100	85.380	ENSSBOG00000034482	-	100	85.380	Saimiri_boliviensis_boliviensis
ENSOMEG00000009167	prpf18	100	85.380	ENSSHAG00000016463	-	100	85.380	Sarcophilus_harrisii
ENSOMEG00000009167	prpf18	100	70.760	ENSSHAG00000009669	-	100	70.760	Sarcophilus_harrisii
ENSOMEG00000009167	prpf18	74	50.199	ENSSFOG00015021154	-	89	51.502	Scleropages_formosus
ENSOMEG00000009167	prpf18	98	86.377	ENSSFOG00015022118	prpf18	100	81.844	Scleropages_formosus
ENSOMEG00000009167	prpf18	100	90.909	ENSSMAG00000005308	prpf18	100	90.909	Scophthalmus_maximus
ENSOMEG00000009167	prpf18	100	95.308	ENSSDUG00000015428	prpf18	100	95.308	Seriola_dumerili
ENSOMEG00000009167	prpf18	100	95.015	ENSSLDG00000023989	prpf18	100	95.015	Seriola_lalandi_dorsalis
ENSOMEG00000009167	prpf18	100	57.018	ENSSARG00000005307	-	100	57.018	Sorex_araneus
ENSOMEG00000009167	prpf18	100	85.673	ENSSPUG00000002619	-	100	85.673	Sphenodon_punctatus
ENSOMEG00000009167	prpf18	100	95.015	ENSSPAG00000019502	prpf18	100	95.015	Stegastes_partitus
ENSOMEG00000009167	prpf18	100	85.088	ENSSSCG00000026354	-	100	85.088	Sus_scrofa
ENSOMEG00000009167	prpf18	100	84.503	ENSTGUG00000002286	-	100	84.503	Taeniopygia_guttata
ENSOMEG00000009167	prpf18	100	90.909	ENSTRUG00000011278	prpf18	100	90.909	Takifugu_rubripes
ENSOMEG00000009167	prpf18	100	91.496	ENSTNIG00000000911	prpf18	100	91.496	Tetraodon_nigroviridis
ENSOMEG00000009167	prpf18	79	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSOMEG00000009167	prpf18	100	85.965	ENSTTRG00000011117	PRPF18	100	85.965	Tursiops_truncatus
ENSOMEG00000009167	prpf18	91	87.781	ENSUAMG00000001815	-	93	87.781	Ursus_americanus
ENSOMEG00000009167	prpf18	100	80.409	ENSUMAG00000012329	-	100	80.409	Ursus_maritimus
ENSOMEG00000009167	prpf18	100	79.825	ENSVPAG00000011486	-	100	79.825	Vicugna_pacos
ENSOMEG00000009167	prpf18	100	85.088	ENSVVUG00000005453	-	100	85.088	Vulpes_vulpes
ENSOMEG00000009167	prpf18	100	76.812	ENSXETG00000024057	prpf18	100	77.391	Xenopus_tropicalis
ENSOMEG00000009167	prpf18	100	91.254	ENSXCOG00000020414	prpf18	100	91.254	Xiphophorus_couchianus
ENSOMEG00000009167	prpf18	100	91.789	ENSXMAG00000004713	prpf18	91	91.789	Xiphophorus_maculatus