EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000009181 (Gene tree)
Gene ID: 112136384
Gene Symbol: grsf1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 6627 bases
Position: chrNVQA01000033.1:935289-941915
Accession: 112136384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000008024	RRM_1	PF00076.22	1.9e-26	1	2
ENSOMEP00000008024	RRM_1	PF00076.22	1.9e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000003120	-	4384	-	ENSOMEP00000008024	377 (aa)	XP_024113822	UPI000CF7D4CB

Gene Model

Click here to download ENSOMEG00000009181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000009181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000009181	grsf1	80	44.785	ENSOMEG00000009827	hnrnph1	87	43.425
ENSOMEG00000009181	grsf1	80	58.442	ENSOMEG00000005017	hnrnph3	67	58.442

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000009181	grsf1	99	63.359	ENSAPOG00000012487	grsf1	95	63.926	Acanthochromis_polyacanthus
ENSOMEG00000009181	grsf1	99	63.212	ENSACIG00000005871	grsf1	88	67.241	Amphilophus_citrinellus
ENSOMEG00000009181	grsf1	99	64.975	ENSAOCG00000017462	-	95	64.380	Amphiprion_ocellaris
ENSOMEG00000009181	grsf1	99	63.544	ENSAPEG00000007240	-	95	63.684	Amphiprion_percula
ENSOMEG00000009181	grsf1	100	59.591	ENSATEG00000007185	grsf1	94	60.108	Anabas_testudineus
ENSOMEG00000009181	grsf1	99	64.810	ENSACLG00000003685	-	89	67.416	Astatotilapia_calliptera
ENSOMEG00000009181	grsf1	94	47.458	ENSAMXG00000012270	grsf1	99	46.893	Astyanax_mexicanus
ENSOMEG00000009181	grsf1	100	62.305	ENSCSEG00000019209	-	89	62.397	Cynoglossus_semilaevis
ENSOMEG00000009181	grsf1	91	65.318	ENSCVAG00000004476	grsf1	90	63.889	Cyprinodon_variegatus
ENSOMEG00000009181	grsf1	85	51.064	ENSDARG00000053021	grsf1	78	49.702	Danio_rerio
ENSOMEG00000009181	grsf1	94	50.138	ENSFHEG00000013358	-	86	51.562	Fundulus_heteroclitus
ENSOMEG00000009181	grsf1	80	52.525	ENSGMOG00000014047	grsf1	99	52.525	Gadus_morhua
ENSOMEG00000009181	grsf1	85	66.364	ENSGAFG00000004496	grsf1	83	66.061	Gambusia_affinis
ENSOMEG00000009181	grsf1	81	60.429	ENSGACG00000014447	grsf1	96	59.627	Gasterosteus_aculeatus
ENSOMEG00000009181	grsf1	99	64.467	ENSHBUG00000006284	grsf1	89	67.606	Haplochromis_burtoni
ENSOMEG00000009181	grsf1	84	61.111	ENSHCOG00000007715	-	83	59.375	Hippocampus_comes
ENSOMEG00000009181	grsf1	84	53.968	ENSIPUG00000010533	grsf1	80	53.651	Ictalurus_punctatus
ENSOMEG00000009181	grsf1	96	61.518	ENSKMAG00000004528	grsf1	88	62.234	Kryptolebias_marmoratus
ENSOMEG00000009181	grsf1	79	58.844	ENSLBEG00000018100	grsf1	93	58.844	Labrus_bergylta
ENSOMEG00000009181	grsf1	99	61.307	ENSMAMG00000002627	grsf1	84	67.879	Mastacembelus_armatus
ENSOMEG00000009181	grsf1	99	64.810	ENSMZEG00005020633	-	89	67.416	Maylandia_zebra
ENSOMEG00000009181	grsf1	98	61.496	ENSMMOG00000014231	grsf1	91	63.930	Mola_mola
ENSOMEG00000009181	grsf1	98	60.250	ENSMALG00000000251	grsf1	95	59.690	Monopterus_albus
ENSOMEG00000009181	grsf1	98	64.872	ENSNBRG00000017774	grsf1	86	66.761	Neolamprologus_brichardi
ENSOMEG00000009181	grsf1	99	65.482	ENSONIG00000014119	grsf1	87	80.488	Oreochromis_niloticus
ENSOMEG00000009181	grsf1	100	81.723	ENSORLG00000030211	grsf1	99	80.418	Oryzias_latipes
ENSOMEG00000009181	grsf1	100	81.462	ENSORLG00020014383	grsf1	99	81.201	Oryzias_latipes_hni
ENSOMEG00000009181	grsf1	100	81.201	ENSORLG00015006520	grsf1	99	80.940	Oryzias_latipes_hsok
ENSOMEG00000009181	grsf1	88	55.620	ENSPKIG00000019432	grsf1	83	55.780	Paramormyrops_kingsleyae
ENSOMEG00000009181	grsf1	86	62.682	ENSPMGG00000013654	grsf1	94	62.391	Periophthalmus_magnuspinnatus
ENSOMEG00000009181	grsf1	99	60.401	ENSPFOG00000006122	grsf1	87	64.589	Poecilia_formosa
ENSOMEG00000009181	grsf1	99	60.705	ENSPLAG00000020977	grsf1	87	63.610	Poecilia_latipinna
ENSOMEG00000009181	grsf1	99	61.404	ENSPMEG00000012485	grsf1	86	65.429	Poecilia_mexicana
ENSOMEG00000009181	grsf1	85	66.272	ENSPREG00000013383	grsf1	83	65.476	Poecilia_reticulata
ENSOMEG00000009181	grsf1	99	65.217	ENSPNYG00000005379	grsf1	89	66.761	Pundamilia_nyererei
ENSOMEG00000009181	grsf1	84	57.453	ENSPNAG00000014912	grsf1	78	56.698	Pygocentrus_nattereri
ENSOMEG00000009181	grsf1	82	47.267	ENSSFOG00015014620	grsf1	81	47.097	Scleropages_formosus
ENSOMEG00000009181	grsf1	84	63.158	ENSSMAG00000014181	grsf1	70	62.500	Scophthalmus_maximus
ENSOMEG00000009181	grsf1	100	62.850	ENSSDUG00000009397	-	97	67.576	Seriola_dumerili
ENSOMEG00000009181	grsf1	100	62.791	ENSSLDG00000025494	grsf1	97	61.891	Seriola_lalandi_dorsalis
ENSOMEG00000009181	grsf1	99	58.629	ENSSPAG00000023296	grsf1	88	61.538	Stegastes_partitus
ENSOMEG00000009181	grsf1	94	58.953	ENSTRUG00000015354	grsf1	90	58.678	Takifugu_rubripes
ENSOMEG00000009181	grsf1	85	60.984	ENSTNIG00000015350	-	97	60.797	Tetraodon_nigroviridis
ENSOMEG00000009181	grsf1	99	60.406	ENSXMAG00000029710	grsf1	86	63.848	Xiphophorus_maculatus