EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000009427 (Gene tree)
Gene ID: 112139936
Gene Symbol: pum3
Alias: -
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 23780 bases
Position: chrNVQA01004110.1:519414-543193
Accession: 112139936
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000008282	CPL	PF08144.11	6e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000002720	-	5929	-	ENSOMEP00000008282	644 (aa)	XP_024118571	UPI000CF836D1

Gene Model

Click here to download ENSOMEG00000009427's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000009427's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000009427	pum3	99	52.207	ENSG00000080608	PUM3	98	52.083	Homo_sapiens
ENSOMEG00000009427	pum3	100	73.733	ENSAPOG00000020252	pum3	100	73.886	Acanthochromis_polyacanthus
ENSOMEG00000009427	pum3	97	54.575	ENSAMEG00000012187	PUM3	91	56.388	Ailuropoda_melanoleuca
ENSOMEG00000009427	pum3	86	72.340	ENSACIG00000009786	pum3	94	72.340	Amphilophus_citrinellus
ENSOMEG00000009427	pum3	100	73.886	ENSAOCG00000004439	pum3	100	74.040	Amphiprion_ocellaris
ENSOMEG00000009427	pum3	100	74.040	ENSAPEG00000020523	pum3	100	74.194	Amphiprion_percula
ENSOMEG00000009427	pum3	99	73.960	ENSATEG00000005799	pum3	99	73.879	Anabas_testudineus
ENSOMEG00000009427	pum3	92	55.155	ENSAPLG00000002920	PUM3	98	55.155	Anas_platyrhynchos
ENSOMEG00000009427	pum3	89	55.382	ENSACAG00000003174	PUM3	92	57.116	Anolis_carolinensis
ENSOMEG00000009427	pum3	99	52.432	ENSANAG00000024520	PUM3	94	55.008	Aotus_nancymaae
ENSOMEG00000009427	pum3	100	71.865	ENSACLG00000001017	pum3	100	71.865	Astatotilapia_calliptera
ENSOMEG00000009427	pum3	99	61.300	ENSAMXG00000020911	pum3	99	60.494	Astyanax_mexicanus
ENSOMEG00000009427	pum3	98	54.054	ENSBTAG00000013357	PUM3	91	55.058	Bos_taurus
ENSOMEG00000009427	pum3	98	54.259	ENSCJAG00000010917	PUM3	94	55.263	Callithrix_jacchus
ENSOMEG00000009427	pum3	96	53.560	ENSCAFG00000002035	PUM3	90	55.366	Canis_familiaris
ENSOMEG00000009427	pum3	96	53.560	ENSCAFG00020026867	PUM3	90	55.366	Canis_lupus_dingo
ENSOMEG00000009427	pum3	98	54.690	ENSCHIG00000021559	PUM3	91	55.721	Capra_hircus
ENSOMEG00000009427	pum3	98	54.372	ENSTSYG00000007481	PUM3	91	55.058	Carlito_syrichta
ENSOMEG00000009427	pum3	98	50.153	ENSCAPG00000010592	-	90	54.003	Cavia_aperea
ENSOMEG00000009427	pum3	98	52.986	ENSCPOG00000008552	-	94	54.295	Cavia_porcellus
ENSOMEG00000009427	pum3	98	53.577	ENSCCAG00000032650	PUM3	94	54.934	Cebus_capucinus
ENSOMEG00000009427	pum3	98	54.849	ENSCATG00000024880	PUM3	91	56.048	Cercocebus_atys
ENSOMEG00000009427	pum3	98	53.736	ENSCLAG00000011892	PUM3	90	55.707	Chinchilla_lanigera
ENSOMEG00000009427	pum3	98	54.054	ENSCSAG00000008691	PUM3	91	56.048	Chlorocebus_sabaeus
ENSOMEG00000009427	pum3	65	55.476	ENSCHOG00000002535	PUM3	62	55.476	Choloepus_hoffmanni
ENSOMEG00000009427	pum3	98	53.846	ENSCPBG00000025470	PUM3	89	55.872	Chrysemys_picta_bellii
ENSOMEG00000009427	pum3	84	38.949	ENSCING00000024199	-	97	38.949	Ciona_intestinalis
ENSOMEG00000009427	pum3	89	38.255	ENSCSAVG00000006072	-	99	38.740	Ciona_savignyi
ENSOMEG00000009427	pum3	98	53.736	ENSCANG00000006142	PUM3	91	55.721	Colobus_angolensis_palliatus
ENSOMEG00000009427	pum3	99	51.598	ENSCGRG00001016402	Pum3	94	54.010	Cricetulus_griseus_chok1gshd
ENSOMEG00000009427	pum3	99	51.598	ENSCGRG00000010207	Pum3	94	54.010	Cricetulus_griseus_crigri
ENSOMEG00000009427	pum3	89	70.619	ENSCSEG00000001565	pum3	99	69.257	Cynoglossus_semilaevis
ENSOMEG00000009427	pum3	70	66.084	ENSCVAG00000006550	pum3	100	66.434	Cyprinodon_variegatus
ENSOMEG00000009427	pum3	99	59.783	ENSDARG00000087779	pum3	97	60.784	Danio_rerio
ENSOMEG00000009427	pum3	99	44.812	ENSDNOG00000008157	PUM3	63	46.854	Dasypus_novemcinctus
ENSOMEG00000009427	pum3	81	59.273	ENSETEG00000015331	PUM3	82	59.287	Echinops_telfairi
ENSOMEG00000009427	pum3	84	41.123	ENSEBUG00000011586	pum3	87	40.000	Eptatretus_burgeri
ENSOMEG00000009427	pum3	96	54.369	ENSEASG00005010350	PUM3	91	55.721	Equus_asinus_asinus
ENSOMEG00000009427	pum3	96	54.369	ENSECAG00000017193	PUM3	91	55.721	Equus_caballus
ENSOMEG00000009427	pum3	92	46.959	ENSEEUG00000010314	PUM3	94	48.501	Erinaceus_europaeus
ENSOMEG00000009427	pum3	99	57.382	ENSELUG00000002215	pum3	93	59.835	Esox_lucius
ENSOMEG00000009427	pum3	99	53.313	ENSFALG00000010509	PUM3	93	55.611	Ficedula_albicollis
ENSOMEG00000009427	pum3	99	53.040	ENSFDAG00000021027	PUM3	93	55.519	Fukomys_damarensis
ENSOMEG00000009427	pum3	100	73.298	ENSFHEG00000015576	pum3	100	73.298	Fundulus_heteroclitus
ENSOMEG00000009427	pum3	82	68.113	ENSGMOG00000014217	pum3	99	68.113	Gadus_morhua
ENSOMEG00000009427	pum3	91	55.872	ENSGALG00000010178	PUM3	93	55.872	Gallus_gallus
ENSOMEG00000009427	pum3	56	71.703	ENSGAFG00000001930	pum3	62	71.703	Gambusia_affinis
ENSOMEG00000009427	pum3	84	75.184	ENSGACG00000017878	pum3	99	75.184	Gasterosteus_aculeatus
ENSOMEG00000009427	pum3	97	54.299	ENSGAGG00000018983	PUM3	96	56.061	Gopherus_agassizii
ENSOMEG00000009427	pum3	99	52.207	ENSGGOG00000006143	PUM3	91	55.877	Gorilla_gorilla
ENSOMEG00000009427	pum3	100	61.479	ENSHBUG00000012903	pum3	100	60.709	Haplochromis_burtoni
ENSOMEG00000009427	pum3	96	53.560	ENSHGLG00000015868	-	91	55.537	Heterocephalus_glaber_female
ENSOMEG00000009427	pum3	96	53.560	ENSHGLG00100018825	PUM3	91	55.537	Heterocephalus_glaber_male
ENSOMEG00000009427	pum3	100	66.617	ENSHCOG00000010306	pum3	100	67.761	Hippocampus_comes
ENSOMEG00000009427	pum3	95	62.682	ENSIPUG00000024801	pum3	99	61.479	Ictalurus_punctatus
ENSOMEG00000009427	pum3	99	51.750	ENSSTOG00000009586	PUM3	94	54.351	Ictidomys_tridecemlineatus
ENSOMEG00000009427	pum3	99	51.520	ENSJJAG00000012563	Pum3	91	54.484	Jaculus_jaculus
ENSOMEG00000009427	pum3	100	75.309	ENSKMAG00000010277	pum3	100	75.309	Kryptolebias_marmoratus
ENSOMEG00000009427	pum3	100	71.145	ENSLBEG00000012213	pum3	100	71.450	Labrus_bergylta
ENSOMEG00000009427	pum3	89	55.304	ENSLACG00000008312	PUM3	94	53.731	Latimeria_chalumnae
ENSOMEG00000009427	pum3	100	58.000	ENSLOCG00000012529	pum3	92	60.997	Lepisosteus_oculatus
ENSOMEG00000009427	pum3	99	53.115	ENSLAFG00000017341	PUM3	99	52.432	Loxodonta_africana
ENSOMEG00000009427	pum3	98	53.895	ENSMFAG00000001430	PUM3	91	55.877	Macaca_fascicularis
ENSOMEG00000009427	pum3	98	53.895	ENSMMUG00000002362	PUM3	89	55.877	Macaca_mulatta
ENSOMEG00000009427	pum3	98	53.895	ENSMNEG00000035288	PUM3	91	55.877	Macaca_nemestrina
ENSOMEG00000009427	pum3	96	54.369	ENSMLEG00000034820	PUM3	91	55.877	Mandrillus_leucophaeus
ENSOMEG00000009427	pum3	100	72.866	ENSMAMG00000022861	pum3	100	73.130	Mastacembelus_armatus
ENSOMEG00000009427	pum3	100	71.560	ENSMZEG00005014205	pum3	97	71.560	Maylandia_zebra
ENSOMEG00000009427	pum3	85	52.158	ENSMGAG00000002255	PUM3	97	52.158	Meleagris_gallopavo
ENSOMEG00000009427	pum3	99	51.294	ENSMAUG00000009733	Pum3	91	54.392	Mesocricetus_auratus
ENSOMEG00000009427	pum3	98	53.577	ENSMICG00000045916	PUM3	81	53.947	Microcebus_murinus
ENSOMEG00000009427	pum3	93	52.358	ENSMOCG00000014830	-	97	52.358	Microtus_ochrogaster
ENSOMEG00000009427	pum3	89	54.146	ENSMOCG00000019519	-	94	54.112	Microtus_ochrogaster
ENSOMEG00000009427	pum3	96	67.145	ENSMMOG00000012184	pum3	97	67.216	Mola_mola
ENSOMEG00000009427	pum3	93	52.751	ENSMODG00000015417	PUM3	84	52.751	Monodelphis_domestica
ENSOMEG00000009427	pum3	100	74.164	ENSMALG00000022164	pum3	92	74.238	Monopterus_albus
ENSOMEG00000009427	pum3	97	51.783	MGP_CAROLIEiJ_G0022845	Pum3	91	55.068	Mus_caroli
ENSOMEG00000009427	pum3	97	51.163	ENSMUSG00000041360	Pum3	91	54.392	Mus_musculus
ENSOMEG00000009427	pum3	99	52.804	MGP_PahariEiJ_G0014338	Pum3	93	54.036	Mus_pahari
ENSOMEG00000009427	pum3	97	51.473	MGP_SPRETEiJ_G0023763	Pum3	91	54.730	Mus_spretus
ENSOMEG00000009427	pum3	97	54.414	ENSMPUG00000005125	PUM3	91	54.892	Mustela_putorius_furo
ENSOMEG00000009427	pum3	96	53.722	ENSMLUG00000002309	PUM3	91	55.224	Myotis_lucifugus
ENSOMEG00000009427	pum3	80	57.143	ENSNGAG00000019468	Pum3	94	51.724	Nannospalax_galili
ENSOMEG00000009427	pum3	97	66.349	ENSNBRG00000021370	pum3	92	67.000	Neolamprologus_brichardi
ENSOMEG00000009427	pum3	94	53.042	ENSNLEG00000008712	PUM3	98	53.797	Nomascus_leucogenys
ENSOMEG00000009427	pum3	76	44.672	ENSMEUG00000013606	-	97	44.512	Notamacropus_eugenii
ENSOMEG00000009427	pum3	72	41.845	ENSOPRG00000004225	-	63	45.985	Ochotona_princeps
ENSOMEG00000009427	pum3	92	53.607	ENSODEG00000003625	-	94	54.337	Octodon_degus
ENSOMEG00000009427	pum3	92	50.489	ENSODEG00000016477	-	94	50.489	Octodon_degus
ENSOMEG00000009427	pum3	100	72.630	ENSONIG00000012733	pum3	100	72.630	Oreochromis_niloticus
ENSOMEG00000009427	pum3	81	56.979	ENSOANG00000014995	PUM3	97	57.036	Ornithorhynchus_anatinus
ENSOMEG00000009427	pum3	96	53.722	ENSOCUG00000026104	-	91	55.058	Oryctolagus_cuniculus
ENSOMEG00000009427	pum3	96	53.398	ENSOCUG00000004189	-	91	54.726	Oryctolagus_cuniculus
ENSOMEG00000009427	pum3	100	91.925	ENSORLG00000014935	pum3	100	91.925	Oryzias_latipes
ENSOMEG00000009427	pum3	100	91.304	ENSORLG00020002841	pum3	100	91.304	Oryzias_latipes_hni
ENSOMEG00000009427	pum3	100	91.615	ENSORLG00015015906	pum3	100	91.615	Oryzias_latipes_hsok
ENSOMEG00000009427	pum3	88	40.702	ENSOGAG00000033481	-	90	41.115	Otolemur_garnettii
ENSOMEG00000009427	pum3	99	52.207	ENSOGAG00000008125	-	94	55.428	Otolemur_garnettii
ENSOMEG00000009427	pum3	98	54.213	ENSOARG00000013337	PUM3	91	55.178	Ovis_aries
ENSOMEG00000009427	pum3	99	52.055	ENSPPAG00000041337	PUM3	90	55.877	Pan_paniscus
ENSOMEG00000009427	pum3	96	53.074	ENSPPRG00000000809	PUM3	91	55.026	Panthera_pardus
ENSOMEG00000009427	pum3	96	53.398	ENSPTIG00000021934	PUM3	91	55.366	Panthera_tigris_altaica
ENSOMEG00000009427	pum3	99	52.207	ENSPTRG00000020735	PUM3	90	56.048	Pan_troglodytes
ENSOMEG00000009427	pum3	96	54.531	ENSPANG00000025118	PUM3	91	56.048	Papio_anubis
ENSOMEG00000009427	pum3	99	58.422	ENSPKIG00000022249	pum3	97	58.292	Paramormyrops_kingsleyae
ENSOMEG00000009427	pum3	97	54.444	ENSPSIG00000016272	PUM3	94	56.303	Pelodiscus_sinensis
ENSOMEG00000009427	pum3	77	72.323	ENSPMGG00000021261	pum3	99	72.323	Periophthalmus_magnuspinnatus
ENSOMEG00000009427	pum3	82	51.220	ENSPEMG00000019340	-	90	51.220	Peromyscus_maniculatus_bairdii
ENSOMEG00000009427	pum3	93	54.295	ENSPCIG00000030598	PUM3	82	54.295	Phascolarctos_cinereus
ENSOMEG00000009427	pum3	100	64.861	ENSPFOG00000001719	pum3	100	64.861	Poecilia_formosa
ENSOMEG00000009427	pum3	100	67.593	ENSPLAG00000020010	pum3	100	67.593	Poecilia_latipinna
ENSOMEG00000009427	pum3	100	67.438	ENSPMEG00000017451	pum3	100	67.438	Poecilia_mexicana
ENSOMEG00000009427	pum3	72	59.364	ENSPREG00000019478	-	75	54.601	Poecilia_reticulata
ENSOMEG00000009427	pum3	99	52.664	ENSPPYG00000019255	PUM3	91	56.218	Pongo_abelii
ENSOMEG00000009427	pum3	99	48.024	ENSPCAG00000005797	PUM3	89	49.918	Procavia_capensis
ENSOMEG00000009427	pum3	98	53.418	ENSPCOG00000027325	PUM3	91	55.058	Propithecus_coquereli
ENSOMEG00000009427	pum3	99	52.432	ENSPVAG00000016135	PUM3	89	54.530	Pteropus_vampyrus
ENSOMEG00000009427	pum3	100	72.239	ENSPNYG00000016124	pum3	100	72.239	Pundamilia_nyererei
ENSOMEG00000009427	pum3	99	58.165	ENSPNAG00000026524	pum3	94	60.371	Pygocentrus_nattereri
ENSOMEG00000009427	pum3	97	52.248	ENSRNOG00000012574	Pum3	94	54.441	Rattus_norvegicus
ENSOMEG00000009427	pum3	97	52.093	ENSRNOG00000048356	RGD1308750	94	54.276	Rattus_norvegicus
ENSOMEG00000009427	pum3	99	52.359	ENSRBIG00000036924	PUM3	94	54.770	Rhinopithecus_bieti
ENSOMEG00000009427	pum3	99	52.511	ENSRROG00000041089	PUM3	94	54.934	Rhinopithecus_roxellana
ENSOMEG00000009427	pum3	99	52.359	ENSSBOG00000028066	PUM3	94	54.934	Saimiri_boliviensis_boliviensis
ENSOMEG00000009427	pum3	97	52.550	ENSSHAG00000003730	PUM3	89	55.912	Sarcophilus_harrisii
ENSOMEG00000009427	pum3	99	58.065	ENSSFOG00015018778	pum3	99	57.604	Scleropages_formosus
ENSOMEG00000009427	pum3	100	70.795	ENSSMAG00000013236	pum3	99	72.324	Scophthalmus_maximus
ENSOMEG00000009427	pum3	100	72.714	ENSSDUG00000001887	pum3	99	72.864	Seriola_dumerili
ENSOMEG00000009427	pum3	100	73.596	ENSSLDG00000015766	pum3	99	74.052	Seriola_lalandi_dorsalis
ENSOMEG00000009427	pum3	81	55.449	ENSSARG00000000579	PUM3	95	52.730	Sorex_araneus
ENSOMEG00000009427	pum3	98	52.283	ENSSPUG00000001707	PUM3	94	53.300	Sphenodon_punctatus
ENSOMEG00000009427	pum3	100	74.189	ENSSPAG00000003976	pum3	100	74.189	Stegastes_partitus
ENSOMEG00000009427	pum3	95	54.545	ENSSSCG00000005227	PUM3	91	55.058	Sus_scrofa
ENSOMEG00000009427	pum3	97	53.061	ENSTGUG00000005339	PUM3	94	55.109	Taeniopygia_guttata
ENSOMEG00000009427	pum3	100	70.365	ENSTRUG00000004074	pum3	99	70.365	Takifugu_rubripes
ENSOMEG00000009427	pum3	99	69.782	ENSTNIG00000010325	pum3	98	69.626	Tetraodon_nigroviridis
ENSOMEG00000009427	pum3	81	45.038	ENSTBEG00000013058	PUM3	82	45.318	Tupaia_belangeri
ENSOMEG00000009427	pum3	98	49.285	ENSTTRG00000001062	PUM3	87	50.426	Tursiops_truncatus
ENSOMEG00000009427	pum3	97	48.475	ENSUMAG00000018443	PUM3	99	55.660	Ursus_maritimus
ENSOMEG00000009427	pum3	99	52.352	ENSVPAG00000010766	PUM3	90	54.992	Vicugna_pacos
ENSOMEG00000009427	pum3	96	53.560	ENSVVUG00000006527	PUM3	90	55.366	Vulpes_vulpes
ENSOMEG00000009427	pum3	98	45.039	ENSXETG00000011707	pum3	91	46.013	Xenopus_tropicalis
ENSOMEG00000009427	pum3	95	66.124	ENSXCOG00000006725	pum3	99	66.007	Xiphophorus_couchianus
ENSOMEG00000009427	pum3	100	66.821	ENSXMAG00000002926	pum3	100	66.821	Xiphophorus_maculatus