EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000009483 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 43016 bases
Position: chrNVQA01006669.1:216771-259786
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000008300	PARP	PF00644.20	5.3e-24	1	1
ENSOMEP00000027166	PARP	PF00644.20	1.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000002660	-	4791	-	ENSOMEP00000027166	1596 (aa)	-	-
ENSOMET00000002680	-	1047	-	ENSOMEP00000008300	348 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000009483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000009483's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000009483	-	85	34.202	ENSOMEG00000016380	-	88	34.202
ENSOMEG00000009483	-	81	45.342	ENSOMEG00000022143	-	74	45.625
ENSOMEG00000009483	-	85	36.000	ENSOMEG00000016369	-	80	46.154
ENSOMEG00000009483	-	85	34.304	ENSOMEG00000016395	-	97	34.304
ENSOMEG00000009483	-	91	54.248	ENSOMEG00000019715	si:ch211-219a4.3	91	54.248
ENSOMEG00000009483	-	56	35.806	ENSOMEG00000009798	-	90	35.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000009483	-	91	60.606	ENSAPOG00000002274	-	92	60.606	Acanthochromis_polyacanthus
ENSOMEG00000009483	-	96	57.478	ENSACIG00000014929	-	78	71.074	Amphilophus_citrinellus
ENSOMEG00000009483	-	73	47.244	ENSACIG00000005931	-	90	47.244	Amphilophus_citrinellus
ENSOMEG00000009483	-	86	73.684	ENSAOCG00000020608	-	87	73.684	Amphiprion_ocellaris
ENSOMEG00000009483	-	59	55.556	ENSAPEG00000022069	-	77	65.217	Amphiprion_percula
ENSOMEG00000009483	-	77	44.516	ENSAMXG00000010209	-	84	44.516	Astyanax_mexicanus
ENSOMEG00000009483	-	86	60.119	ENSAMXG00000010091	-	83	60.714	Astyanax_mexicanus
ENSOMEG00000009483	-	96	70.861	ENSCVAG00000009352	-	93	70.861	Cyprinodon_variegatus
ENSOMEG00000009483	-	91	67.763	ENSDARG00000112454	FO744833.2	88	67.763	Danio_rerio
ENSOMEG00000009483	-	97	64.497	ENSELUG00000013643	-	93	64.497	Esox_lucius
ENSOMEG00000009483	-	76	40.645	ENSELUG00000004826	-	65	40.645	Esox_lucius
ENSOMEG00000009483	-	93	58.876	ENSHBUG00000013327	-	80	71.242	Haplochromis_burtoni
ENSOMEG00000009483	-	85	42.931	ENSIPUG00000019762	-	92	47.561	Ictalurus_punctatus
ENSOMEG00000009483	-	97	60.119	ENSIPUG00000019562	-	92	59.412	Ictalurus_punctatus
ENSOMEG00000009483	-	97	74.675	ENSKMAG00000010882	-	93	74.675	Kryptolebias_marmoratus
ENSOMEG00000009483	-	92	66.272	ENSLBEG00000026419	-	99	52.473	Labrus_bergylta
ENSOMEG00000009483	-	99	54.704	ENSMZEG00005002061	-	99	54.765	Maylandia_zebra
ENSOMEG00000009483	-	99	51.203	ENSMZEG00005027856	-	99	51.418	Maylandia_zebra
ENSOMEG00000009483	-	90	65.839	ENSMMOG00000010419	-	96	65.839	Mola_mola
ENSOMEG00000009483	-	89	58.104	ENSNBRG00000002998	-	83	66.116	Neolamprologus_brichardi
ENSOMEG00000009483	-	97	65.089	ENSONIG00000000234	-	93	65.089	Oreochromis_niloticus
ENSOMEG00000009483	-	98	83.432	ENSORLG00000017386	-	94	83.432	Oryzias_latipes
ENSOMEG00000009483	-	98	75.796	ENSORLG00000017404	-	94	75.796	Oryzias_latipes
ENSOMEG00000009483	-	89	72.188	ENSORLG00020014046	-	87	83.735	Oryzias_latipes_hni
ENSOMEG00000009483	-	97	73.885	ENSORLG00015004253	-	94	73.885	Oryzias_latipes_hsok
ENSOMEG00000009483	-	100	69.708	ENSORLG00015004157	-	100	69.641	Oryzias_latipes_hsok
ENSOMEG00000009483	-	86	37.549	ENSPKIG00000004064	-	84	42.384	Paramormyrops_kingsleyae
ENSOMEG00000009483	-	97	73.457	ENSPFOG00000015738	-	89	73.457	Poecilia_formosa
ENSOMEG00000009483	-	89	60.790	ENSPLAG00000022742	-	76	73.457	Poecilia_latipinna
ENSOMEG00000009483	-	99	55.583	ENSPREG00000017145	-	99	55.747	Poecilia_reticulata
ENSOMEG00000009483	-	50	62.778	ENSPNYG00000008208	-	61	62.778	Pundamilia_nyererei
ENSOMEG00000009483	-	77	69.325	ENSPNYG00000006865	-	83	69.325	Pundamilia_nyererei
ENSOMEG00000009483	-	76	40.645	ENSPNAG00000005968	-	61	32.836	Pygocentrus_nattereri
ENSOMEG00000009483	-	84	62.500	ENSPNAG00000026750	-	89	63.095	Pygocentrus_nattereri
ENSOMEG00000009483	-	98	55.866	ENSSFOG00015006999	-	92	55.866	Scleropages_formosus
ENSOMEG00000009483	-	85	37.363	ENSSFOG00015019732	-	67	37.363	Scleropages_formosus
ENSOMEG00000009483	-	97	69.375	ENSSMAG00000016922	-	100	68.519	Scophthalmus_maximus
ENSOMEG00000009483	-	86	64.118	ENSSDUG00000013560	-	75	62.500	Seriola_dumerili
ENSOMEG00000009483	-	100	55.461	ENSSPAG00000014708	-	100	55.327	Stegastes_partitus
ENSOMEG00000009483	-	96	64.706	ENSTRUG00000003423	-	91	64.706	Takifugu_rubripes
ENSOMEG00000009483	-	99	54.819	ENSXCOG00000012535	-	99	54.759	Xiphophorus_couchianus
ENSOMEG00000009483	-	91	60.294	ENSXMAG00000015158	-	88	70.988	Xiphophorus_maculatus