EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000009736 (Gene tree)
Gene ID: 112142057
Gene Symbol: -
Alias: -
Full Name: probable global transcription activator SNF2L2
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 35824 bases
Position: chrNVQA01007968.1:91856-127679
Accession: 112142057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000027263	ResIII	PF04851.15	1.9e-07	1	1
ENSOMEP00000027210	ResIII	PF04851.15	1.9e-07	1	1
ENSOMEP00000027247	ResIII	PF04851.15	1.9e-07	1	1
ENSOMEP00000027292	ResIII	PF04851.15	2e-07	1	1
ENSOMEP00000027210	BRK	PF07533.16	2e-17	1	1
ENSOMEP00000027247	BRK	PF07533.16	2.1e-17	1	1
ENSOMEP00000027263	BRK	PF07533.16	2.2e-17	1	1
ENSOMEP00000027292	BRK	PF07533.16	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000002566	-	4452	-	ENSOMEP00000027210	1483 (aa)	-	-
ENSOMET00000002361	-	9330	-	ENSOMEP00000027292	1597 (aa)	-	-
ENSOMET00000002415	-	7791	-	ENSOMEP00000027263	1574 (aa)	XP_024121062	UPI000CF81EF9
ENSOMET00000002491	-	4892	-	ENSOMEP00000027247	1541 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000009736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000009736's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000009736	-	94	70.025	ENSOMEG00000016626	-	99	69.783
ENSOMEG00000009736	-	96	71.229	ENSOMEG00000007486	smarca4a	99	71.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000009736	-	97	80.013	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSOMEG00000009736	-	100	92.361	ENSAPOG00000002641	SMARCA2	100	92.172	Acanthochromis_polyacanthus
ENSOMEG00000009736	-	91	76.548	ENSAMEG00000012325	SMARCA2	98	86.067	Ailuropoda_melanoleuca
ENSOMEG00000009736	-	100	89.037	ENSACIG00000015607	SMARCA2	100	89.001	Amphilophus_citrinellus
ENSOMEG00000009736	-	100	92.560	ENSAOCG00000009647	-	100	92.119	Amphiprion_ocellaris
ENSOMEG00000009736	-	100	92.551	ENSAPEG00000007646	SMARCA2	100	92.361	Amphiprion_percula
ENSOMEG00000009736	-	99	91.165	ENSATEG00000006916	SMARCA2	98	90.781	Anabas_testudineus
ENSOMEG00000009736	-	92	78.814	ENSAPLG00000013873	SMARCA2	93	78.925	Anas_platyrhynchos
ENSOMEG00000009736	-	97	80.287	ENSACAG00000002423	SMARCA2	100	80.025	Anolis_carolinensis
ENSOMEG00000009736	-	97	79.987	ENSANAG00000026498	SMARCA2	99	80.913	Aotus_nancymaae
ENSOMEG00000009736	-	100	91.430	ENSACLG00000004248	SMARCA2	100	91.624	Astatotilapia_calliptera
ENSOMEG00000009736	-	99	85.460	ENSAMXG00000012404	smarca2	100	85.116	Astyanax_mexicanus
ENSOMEG00000009736	-	97	80.590	ENSBTAG00000007494	SMARCA2	99	81.323	Bos_taurus
ENSOMEG00000009736	-	97	80.378	ENSCJAG00000010710	SMARCA2	99	81.077	Callithrix_jacchus
ENSOMEG00000009736	-	97	80.799	ENSCAFG00000002013	SMARCA2	99	81.400	Canis_familiaris
ENSOMEG00000009736	-	77	86.126	ENSCAFG00020026802	SMARCA2	94	86.684	Canis_lupus_dingo
ENSOMEG00000009736	-	97	80.787	ENSCHIG00000025863	SMARCA2	99	81.323	Capra_hircus
ENSOMEG00000009736	-	97	77.785	ENSTSYG00000003858	SMARCA2	99	80.000	Carlito_syrichta
ENSOMEG00000009736	-	97	78.837	ENSCAPG00000002890	SMARCA2	99	78.392	Cavia_aperea
ENSOMEG00000009736	-	97	81.123	ENSCPOG00000005475	SMARCA2	99	80.989	Cavia_porcellus
ENSOMEG00000009736	-	97	80.065	ENSCCAG00000030636	SMARCA2	99	80.989	Cebus_capucinus
ENSOMEG00000009736	-	97	80.376	ENSCATG00000031470	SMARCA2	99	80.591	Cercocebus_atys
ENSOMEG00000009736	-	100	79.510	ENSCLAG00000014484	SMARCA2	99	80.934	Chinchilla_lanigera
ENSOMEG00000009736	-	95	81.376	ENSCSAG00000008650	SMARCA2	99	81.695	Chlorocebus_sabaeus
ENSOMEG00000009736	-	83	82.097	ENSCHOG00000004316	SMARCA2	86	82.097	Choloepus_hoffmanni
ENSOMEG00000009736	-	100	80.252	ENSCPBG00000025463	SMARCA2	100	83.445	Chrysemys_picta_bellii
ENSOMEG00000009736	-	97	80.026	ENSCANG00000039597	SMARCA2	99	80.962	Colobus_angolensis_palliatus
ENSOMEG00000009736	-	97	75.805	ENSCGRG00001002323	Smarca2	99	75.466	Cricetulus_griseus_chok1gshd
ENSOMEG00000009736	-	99	84.980	ENSCSEG00000019311	SMARCA2	98	85.176	Cynoglossus_semilaevis
ENSOMEG00000009736	-	88	87.462	ENSCVAG00000016571	SMARCA2	98	88.054	Cyprinodon_variegatus
ENSOMEG00000009736	-	100	84.412	ENSDARG00000008904	smarca2	100	84.045	Danio_rerio
ENSOMEG00000009736	-	97	80.103	ENSDNOG00000006402	SMARCA2	99	80.510	Dasypus_novemcinctus
ENSOMEG00000009736	-	97	79.883	ENSDORG00000014832	Smarca2	99	80.715	Dipodomys_ordii
ENSOMEG00000009736	-	80	61.398	FBgn0000212	brm	93	52.441	Drosophila_melanogaster
ENSOMEG00000009736	-	88	60.809	ENSEBUG00000002449	-	93	63.284	Eptatretus_burgeri
ENSOMEG00000009736	-	97	69.363	ENSEBUG00000011442	-	97	69.422	Eptatretus_burgeri
ENSOMEG00000009736	-	97	80.603	ENSEASG00005010312	SMARCA2	99	81.282	Equus_asinus_asinus
ENSOMEG00000009736	-	64	88.235	ENSEEUG00000015540	-	64	88.235	Erinaceus_europaeus
ENSOMEG00000009736	-	97	82.990	ENSELUG00000010318	smarca2	99	81.989	Esox_lucius
ENSOMEG00000009736	-	96	81.063	ENSFCAG00000001568	SMARCA2	99	81.205	Felis_catus
ENSOMEG00000009736	-	100	79.698	ENSFALG00000010416	SMARCA2	98	82.133	Ficedula_albicollis
ENSOMEG00000009736	-	97	79.286	ENSFDAG00000010502	SMARCA2	99	78.894	Fukomys_damarensis
ENSOMEG00000009736	-	100	90.294	ENSFHEG00000021250	SMARCA2	100	90.482	Fundulus_heteroclitus
ENSOMEG00000009736	-	99	83.754	ENSGMOG00000014229	SMARCA2	99	83.754	Gadus_morhua
ENSOMEG00000009736	-	100	80.177	ENSGALG00000010164	SMARCA2	100	80.189	Gallus_gallus
ENSOMEG00000009736	-	97	82.015	ENSGAFG00000001164	SMARCA2	95	83.021	Gambusia_affinis
ENSOMEG00000009736	-	99	87.516	ENSGACG00000014488	SMARCA2	99	87.070	Gasterosteus_aculeatus
ENSOMEG00000009736	-	97	80.194	ENSGAGG00000024412	SMARCA2	100	80.063	Gopherus_agassizii
ENSOMEG00000009736	-	100	78.788	ENSGGOG00000000513	SMARCA2	98	80.236	Gorilla_gorilla
ENSOMEG00000009736	-	100	90.749	ENSHBUG00000006691	SMARCA2	100	90.749	Haplochromis_burtoni
ENSOMEG00000009736	-	97	79.151	ENSHGLG00000005215	SMARCA2	98	80.293	Heterocephalus_glaber_female
ENSOMEG00000009736	-	97	81.238	ENSHGLG00100010496	SMARCA2	99	82.192	Heterocephalus_glaber_male
ENSOMEG00000009736	-	93	82.400	ENSHCOG00000015348	-	95	87.594	Hippocampus_comes
ENSOMEG00000009736	-	99	83.217	ENSIPUG00000011060	smarca2	100	82.050	Ictalurus_punctatus
ENSOMEG00000009736	-	97	79.357	ENSSTOG00000006812	SMARCA2	99	80.627	Ictidomys_tridecemlineatus
ENSOMEG00000009736	-	97	79.935	ENSJJAG00000010867	Smarca2	99	80.511	Jaculus_jaculus
ENSOMEG00000009736	-	100	91.131	ENSKMAG00000015844	-	100	90.693	Kryptolebias_marmoratus
ENSOMEG00000009736	-	97	82.826	ENSLOCG00000011499	smarca2	99	83.031	Lepisosteus_oculatus
ENSOMEG00000009736	-	97	79.153	ENSLAFG00000014061	SMARCA2	99	80.063	Loxodonta_africana
ENSOMEG00000009736	-	100	80.308	ENSMFAG00000003814	SMARCA2	99	81.486	Macaca_fascicularis
ENSOMEG00000009736	-	99	79.670	ENSMMUG00000015279	SMARCA2	99	80.806	Macaca_mulatta
ENSOMEG00000009736	-	100	78.719	ENSMNEG00000041069	SMARCA2	99	80.735	Macaca_nemestrina
ENSOMEG00000009736	-	100	80.284	ENSMLEG00000027418	SMARCA2	99	81.661	Mandrillus_leucophaeus
ENSOMEG00000009736	-	100	90.006	ENSMAMG00000003056	SMARCA2	100	90.069	Mastacembelus_armatus
ENSOMEG00000009736	-	100	91.173	ENSMZEG00005020709	SMARCA2	100	91.362	Maylandia_zebra
ENSOMEG00000009736	-	76	67.768	ENSMGAG00000005160	-	100	67.942	Meleagris_gallopavo
ENSOMEG00000009736	-	97	80.287	ENSMICG00000005162	SMARCA2	99	81.214	Microcebus_murinus
ENSOMEG00000009736	-	97	80.196	ENSMOCG00000001611	Smarca2	99	80.575	Microtus_ochrogaster
ENSOMEG00000009736	-	99	85.055	ENSMMOG00000014196	SMARCA2	99	84.655	Mola_mola
ENSOMEG00000009736	-	97	80.051	ENSMODG00000003578	SMARCA2	99	80.651	Monodelphis_domestica
ENSOMEG00000009736	-	99	90.784	ENSMALG00000009611	SMARCA2	99	90.784	Monopterus_albus
ENSOMEG00000009736	-	96	79.974	MGP_CAROLIEiJ_G0022841	Smarca2	99	80.140	Mus_caroli
ENSOMEG00000009736	-	82	85.614	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSOMEG00000009736	-	96	80.694	MGP_PahariEiJ_G0014334	Smarca2	99	80.408	Mus_pahari
ENSOMEG00000009736	-	81	90.977	MGP_SPRETEiJ_G0023759	Smarca2	97	90.909	Mus_spretus
ENSOMEG00000009736	-	81	84.789	ENSMPUG00000005171	SMARCA2	93	85.703	Mustela_putorius_furo
ENSOMEG00000009736	-	97	75.445	ENSMLUG00000002342	SMARCA2	99	75.957	Myotis_lucifugus
ENSOMEG00000009736	-	97	79.532	ENSNGAG00000000108	Smarca2	99	79.643	Nannospalax_galili
ENSOMEG00000009736	-	95	74.650	ENSNBRG00000017998	SMARCA2	94	84.080	Neolamprologus_brichardi
ENSOMEG00000009736	-	100	80.077	ENSNLEG00000008575	SMARCA2	99	80.272	Nomascus_leucogenys
ENSOMEG00000009736	-	94	76.676	ENSMEUG00000009812	SMARCA2	99	74.644	Notamacropus_eugenii
ENSOMEG00000009736	-	81	81.043	ENSOPRG00000013474	SMARCA2	99	76.097	Ochotona_princeps
ENSOMEG00000009736	-	97	79.377	ENSODEG00000005452	SMARCA2	98	80.140	Octodon_degus
ENSOMEG00000009736	-	99	90.512	ENSONIG00000014163	SMARCA2	99	90.576	Oreochromis_niloticus
ENSOMEG00000009736	-	51	87.879	ENSOANG00000008299	-	95	89.488	Ornithorhynchus_anatinus
ENSOMEG00000009736	-	100	79.862	ENSOCUG00000006320	SMARCA2	99	80.268	Oryctolagus_cuniculus
ENSOMEG00000009736	-	100	96.395	ENSORLG00000020820	SMARCA2	100	96.395	Oryzias_latipes
ENSOMEG00000009736	-	100	96.582	ENSORLG00015006289	SMARCA2	100	96.582	Oryzias_latipes_hsok
ENSOMEG00000009736	-	81	86.034	ENSOGAG00000017053	SMARCA2	99	78.957	Otolemur_garnettii
ENSOMEG00000009736	-	97	79.180	ENSOARG00000013265	SMARCA2	99	80.660	Ovis_aries
ENSOMEG00000009736	-	100	79.755	ENSPPAG00000038717	SMARCA2	98	80.805	Pan_paniscus
ENSOMEG00000009736	-	96	81.130	ENSPPRG00000001879	SMARCA2	99	81.270	Panthera_pardus
ENSOMEG00000009736	-	97	79.858	ENSPTRG00000051168	SMARCA2	99	80.717	Pan_troglodytes
ENSOMEG00000009736	-	97	76.252	ENSPANG00000025121	SMARCA2	99	76.272	Papio_anubis
ENSOMEG00000009736	-	100	85.391	ENSPKIG00000018469	-	100	84.819	Paramormyrops_kingsleyae
ENSOMEG00000009736	-	97	79.910	ENSPSIG00000006284	SMARCA2	100	79.724	Pelodiscus_sinensis
ENSOMEG00000009736	-	99	83.943	ENSPMGG00000013696	-	98	83.943	Periophthalmus_magnuspinnatus
ENSOMEG00000009736	-	97	79.469	ENSPEMG00000019821	Smarca2	99	79.987	Peromyscus_maniculatus_bairdii
ENSOMEG00000009736	-	97	69.117	ENSPMAG00000005337	-	97	70.127	Petromyzon_marinus
ENSOMEG00000009736	-	100	81.298	ENSPCIG00000015658	SMARCA2	99	82.003	Phascolarctos_cinereus
ENSOMEG00000009736	-	100	90.201	ENSPFOG00000001856	SMARCA2	100	90.327	Poecilia_formosa
ENSOMEG00000009736	-	99	89.867	ENSPLAG00000017829	SMARCA2	98	88.036	Poecilia_latipinna
ENSOMEG00000009736	-	99	89.797	ENSPMEG00000001815	-	99	89.819	Poecilia_mexicana
ENSOMEG00000009736	-	100	89.451	ENSPREG00000013800	SMARCA2	100	89.700	Poecilia_reticulata
ENSOMEG00000009736	-	97	79.701	ENSPPYG00000019258	SMARCA2	99	80.602	Pongo_abelii
ENSOMEG00000009736	-	72	92.754	ENSPCAG00000016969	SMARCA2	71	92.754	Procavia_capensis
ENSOMEG00000009736	-	97	78.460	ENSPCOG00000025709	SMARCA2	99	79.032	Propithecus_coquereli
ENSOMEG00000009736	-	84	92.391	ENSPVAG00000000901	SMARCA2	89	92.391	Pteropus_vampyrus
ENSOMEG00000009736	-	100	88.146	ENSPNYG00000004533	SMARCA2	100	88.083	Pundamilia_nyererei
ENSOMEG00000009736	-	99	85.188	ENSPNAG00000014635	smarca2	98	85.896	Pygocentrus_nattereri
ENSOMEG00000009736	-	97	79.132	ENSRNOG00000011931	Smarca2	99	79.571	Rattus_norvegicus
ENSOMEG00000009736	-	97	80.317	ENSRBIG00000038618	SMARCA2	99	81.452	Rhinopithecus_bieti
ENSOMEG00000009736	-	97	79.121	ENSRROG00000019271	SMARCA2	99	81.125	Rhinopithecus_roxellana
ENSOMEG00000009736	-	93	88.124	ENSSBOG00000034827	SMARCA2	99	80.349	Saimiri_boliviensis_boliviensis
ENSOMEG00000009736	-	97	79.974	ENSSHAG00000007884	SMARCA2	99	80.424	Sarcophilus_harrisii
ENSOMEG00000009736	-	94	84.996	ENSSFOG00015014870	SMARCA2	97	86.643	Scleropages_formosus
ENSOMEG00000009736	-	100	89.554	ENSSMAG00000013707	SMARCA2	100	89.873	Scophthalmus_maximus
ENSOMEG00000009736	-	100	88.336	ENSSDUG00000008852	-	100	88.643	Seriola_dumerili
ENSOMEG00000009736	-	99	87.372	ENSSLDG00000025449	SMARCA2	98	87.051	Seriola_lalandi_dorsalis
ENSOMEG00000009736	-	89	92.391	ENSSARG00000007888	SMARCA2	89	92.391	Sorex_araneus
ENSOMEG00000009736	-	95	76.893	ENSSPUG00000001629	SMARCA2	96	77.502	Sphenodon_punctatus
ENSOMEG00000009736	-	100	92.569	ENSSPAG00000020091	-	100	92.506	Stegastes_partitus
ENSOMEG00000009736	-	97	80.656	ENSSSCG00000005232	SMARCA2	99	81.388	Sus_scrofa
ENSOMEG00000009736	-	97	79.896	ENSTGUG00000005460	SMARCA2	99	80.345	Taeniopygia_guttata
ENSOMEG00000009736	-	99	87.445	ENSTRUG00000015619	SMARCA2	99	88.179	Takifugu_rubripes
ENSOMEG00000009736	-	65	97.619	ENSTBEG00000008767	SMARCA2	68	97.619	Tupaia_belangeri
ENSOMEG00000009736	-	95	80.331	ENSTTRG00000002033	SMARCA2	95	81.025	Tursiops_truncatus
ENSOMEG00000009736	-	90	81.716	ENSUAMG00000024701	SMARCA2	99	81.667	Ursus_americanus
ENSOMEG00000009736	-	89	77.992	ENSVPAG00000001204	SMARCA2	98	74.338	Vicugna_pacos
ENSOMEG00000009736	-	77	85.963	ENSVVUG00000004598	SMARCA2	96	86.524	Vulpes_vulpes
ENSOMEG00000009736	-	100	76.576	ENSXETG00000015299	smarca2	99	76.614	Xenopus_tropicalis
ENSOMEG00000009736	-	93	86.454	ENSXCOG00000011073	SMARCA2	99	87.349	Xiphophorus_couchianus
ENSOMEG00000009736	-	100	89.159	ENSXMAG00000015611	SMARCA2	100	89.470	Xiphophorus_maculatus