EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000009827 (Gene tree)
Gene ID: 112153114
Gene Symbol: hnrnph1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 11311 bases
Position: chrNVQA01000017.1:7305206-7316516
Accession: 112153114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000027387	zf-RNPHF	PF08080.12	4.2e-09	1	1
ENSOMEP00000008623	zf-RNPHF	PF08080.12	4.8e-09	1	1
ENSOMEP00000008623	RRM_1	PF00076.22	1.2e-31	1	3
ENSOMEP00000008623	RRM_1	PF00076.22	1.2e-31	2	3
ENSOMEP00000008623	RRM_1	PF00076.22	1.2e-31	3	3
ENSOMEP00000027387	RRM_1	PF00076.22	1.7e-31	1	3
ENSOMEP00000027387	RRM_1	PF00076.22	1.7e-31	2	3
ENSOMEP00000027387	RRM_1	PF00076.22	1.7e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000002109	-	5204	-	ENSOMEP00000027387	408 (aa)	XP_024138809	UPI000CF83F26
ENSOMET00000002136	-	1793	-	ENSOMEP00000008623	380 (aa)	XP_024138810	UPI000CF81861

Gene Model

Click here to download ENSOMEG00000009827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000009827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000009827	hnrnph1	99	59.091	ENSOMEG00000005017	hnrnph3	98	58.312
ENSOMEG00000009827	hnrnph1	87	43.425	ENSOMEG00000009181	grsf1	80	44.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000009827	hnrnph1	100	97.794	ENSAPOG00000016614	hnrnph1	100	97.794	Acanthochromis_polyacanthus
ENSOMEG00000009827	hnrnph1	99	96.825	ENSACIG00000008964	hnrnph1	98	97.082	Amphilophus_citrinellus
ENSOMEG00000009827	hnrnph1	100	98.284	ENSAOCG00000008372	hnrnph1	100	98.284	Amphiprion_ocellaris
ENSOMEG00000009827	hnrnph1	100	98.039	ENSAPEG00000012980	hnrnph1	100	98.039	Amphiprion_percula
ENSOMEG00000009827	hnrnph1	100	98.039	ENSATEG00000002792	hnrnph1	100	98.039	Anabas_testudineus
ENSOMEG00000009827	hnrnph1	90	82.192	ENSACAG00000016323	-	91	75.779	Anolis_carolinensis
ENSOMEG00000009827	hnrnph1	90	94.663	ENSACLG00000003313	hnrnph1	97	94.663	Astatotilapia_calliptera
ENSOMEG00000009827	hnrnph1	98	85.146	ENSAMXG00000030703	hnrnph1l	84	82.152	Astyanax_mexicanus
ENSOMEG00000009827	hnrnph1	99	87.599	ENSAMXG00000002483	hnrnph1	99	88.158	Astyanax_mexicanus
ENSOMEG00000009827	hnrnph1	100	96.341	ENSCSEG00000015891	hnrnph1	100	96.341	Cynoglossus_semilaevis
ENSOMEG00000009827	hnrnph1	100	96.078	ENSCVAG00000014097	hnrnph1	100	96.078	Cyprinodon_variegatus
ENSOMEG00000009827	hnrnph1	99	87.071	ENSDARG00000040881	hnrnph1	94	87.664	Danio_rerio
ENSOMEG00000009827	hnrnph1	98	89.125	ENSDARG00000005551	hnrnph1l	99	85.575	Danio_rerio
ENSOMEG00000009827	hnrnph1	99	84.514	ENSELUG00000021437	-	99	87.402	Esox_lucius
ENSOMEG00000009827	hnrnph1	99	88.718	ENSELUG00000006715	hnrnph1	98	87.436	Esox_lucius
ENSOMEG00000009827	hnrnph1	100	94.118	ENSFHEG00000008474	hnrnph1	100	92.402	Fundulus_heteroclitus
ENSOMEG00000009827	hnrnph1	99	88.325	ENSGMOG00000006782	hnrnph1	98	88.579	Gadus_morhua
ENSOMEG00000009827	hnrnph1	100	98.039	ENSGAFG00000006280	hnrnph1	100	98.039	Gambusia_affinis
ENSOMEG00000009827	hnrnph1	100	92.402	ENSGACG00000018352	hnrnph1	99	90.799	Gasterosteus_aculeatus
ENSOMEG00000009827	hnrnph1	90	94.663	ENSHBUG00000010547	hnrnph1	98	94.663	Haplochromis_burtoni
ENSOMEG00000009827	hnrnph1	99	89.691	ENSHCOG00000004513	hnrnph1	100	88.361	Hippocampus_comes
ENSOMEG00000009827	hnrnph1	100	82.809	ENSIPUG00000018262	hnrnph1	100	84.746	Ictalurus_punctatus
ENSOMEG00000009827	hnrnph1	98	84.085	ENSIPUG00000024047	hnrnph1l	90	84.881	Ictalurus_punctatus
ENSOMEG00000009827	hnrnph1	100	95.366	ENSKMAG00000018802	hnrnph1	100	94.146	Kryptolebias_marmoratus
ENSOMEG00000009827	hnrnph1	100	96.569	ENSLBEG00000027811	hnrnph1	100	96.569	Labrus_bergylta
ENSOMEG00000009827	hnrnph1	98	83.333	ENSLOCG00000012510	hnrnph1	91	82.836	Lepisosteus_oculatus
ENSOMEG00000009827	hnrnph1	99	54.545	ENSMMUG00000017392	-	83	57.766	Macaca_mulatta
ENSOMEG00000009827	hnrnph1	99	54.273	ENSMNEG00000030544	-	83	57.766	Macaca_nemestrina
ENSOMEG00000009827	hnrnph1	93	91.935	ENSMAMG00000011478	hnrnph1	99	91.935	Mastacembelus_armatus
ENSOMEG00000009827	hnrnph1	100	97.794	ENSMZEG00005009791	hnrnph1	100	97.794	Maylandia_zebra
ENSOMEG00000009827	hnrnph1	99	93.963	ENSMMOG00000009064	hnrnph1	99	93.701	Mola_mola
ENSOMEG00000009827	hnrnph1	80	51.940	ENSMODG00000002200	-	99	51.497	Monodelphis_domestica
ENSOMEG00000009827	hnrnph1	93	94.444	ENSMALG00000003999	hnrnph1	99	94.444	Monopterus_albus
ENSOMEG00000009827	hnrnph1	90	94.663	ENSNBRG00000015406	hnrnph1	98	94.663	Neolamprologus_brichardi
ENSOMEG00000009827	hnrnph1	100	97.794	ENSONIG00000017754	hnrnph1	100	97.794	Oreochromis_niloticus
ENSOMEG00000009827	hnrnph1	100	97.821	ENSORLG00000006932	hnrnph1	100	97.821	Oryzias_latipes
ENSOMEG00000009827	hnrnph1	100	97.821	ENSORLG00020007881	hnrnph1	100	97.821	Oryzias_latipes_hni
ENSOMEG00000009827	hnrnph1	100	97.821	ENSORLG00015005306	hnrnph1	100	97.821	Oryzias_latipes_hsok
ENSOMEG00000009827	hnrnph1	99	88.918	ENSPKIG00000018203	hnrnph1l	100	85.158	Paramormyrops_kingsleyae
ENSOMEG00000009827	hnrnph1	92	82.842	ENSPKIG00000009532	-	97	80.702	Paramormyrops_kingsleyae
ENSOMEG00000009827	hnrnph1	100	94.363	ENSPMGG00000012151	hnrnph1	100	94.118	Periophthalmus_magnuspinnatus
ENSOMEG00000009827	hnrnph1	100	98.039	ENSPFOG00000004097	hnrnph1	100	98.039	Poecilia_formosa
ENSOMEG00000009827	hnrnph1	100	98.039	ENSPLAG00000011771	hnrnph1	100	98.039	Poecilia_latipinna
ENSOMEG00000009827	hnrnph1	100	98.284	ENSPMEG00000019446	hnrnph1	100	98.284	Poecilia_mexicana
ENSOMEG00000009827	hnrnph1	100	98.039	ENSPREG00000005780	hnrnph1	100	98.039	Poecilia_reticulata
ENSOMEG00000009827	hnrnph1	100	97.794	ENSPNYG00000000204	hnrnph1	100	97.794	Pundamilia_nyererei
ENSOMEG00000009827	hnrnph1	98	86.472	ENSPNAG00000002784	hnrnph1l	99	82.885	Pygocentrus_nattereri
ENSOMEG00000009827	hnrnph1	99	87.335	ENSPNAG00000000439	hnrnph1	98	86.563	Pygocentrus_nattereri
ENSOMEG00000009827	hnrnph1	99	88.654	ENSSFOG00015016055	-	94	88.743	Scleropages_formosus
ENSOMEG00000009827	hnrnph1	99	91.029	ENSSFOG00015022796	hnrnph1l	99	88.421	Scleropages_formosus
ENSOMEG00000009827	hnrnph1	98	94.764	ENSSMAG00000007820	hnrnph1	96	95.013	Scophthalmus_maximus
ENSOMEG00000009827	hnrnph1	100	98.284	ENSSDUG00000008785	hnrnph1	100	98.284	Seriola_dumerili
ENSOMEG00000009827	hnrnph1	100	98.284	ENSSLDG00000010685	hnrnph1	100	98.284	Seriola_lalandi_dorsalis
ENSOMEG00000009827	hnrnph1	100	97.549	ENSSPAG00000009921	hnrnph1	100	97.549	Stegastes_partitus
ENSOMEG00000009827	hnrnph1	100	96.324	ENSTRUG00000020069	hnrnph1	100	96.324	Takifugu_rubripes
ENSOMEG00000009827	hnrnph1	98	77.000	ENSXETG00000018321	hnrnph1	85	79.088	Xenopus_tropicalis
ENSOMEG00000009827	hnrnph1	99	94.643	ENSXCOG00000009133	hnrnph1	97	94.885	Xiphophorus_couchianus
ENSOMEG00000009827	hnrnph1	99	97.884	ENSXMAG00000021332	hnrnph1	99	98.143	Xiphophorus_maculatus