EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000010334 (Gene tree)
Gene ID: 112142901
Gene Symbol: rab34b
Alias: -
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 6889 bases
Position: chrNVQA01000005.1:15899010-15905898
Accession: 112142901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000009126	MMR_HSR1	PF01926.23	5.1e-05	1	1
ENSOMEP00000009146	MMR_HSR1	PF01926.23	8.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000001266	-	1550	-	ENSOMEP00000009146	298 (aa)	-	-
ENSOMET00000001297	-	1443	XM_024266574	ENSOMEP00000009126	245 (aa)	XP_024122342	UPI000CF838D8

Gene Model

Click here to download ENSOMEG00000010334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000010334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000010334	rab34b	61	37.333	ENSOMEG00000001706	rab23	77	39.752
ENSOMEG00000010334	rab34b	82	30.500	ENSOMEG00000010692	rab5aa	89	30.500
ENSOMEG00000010334	rab34b	68	36.527	ENSOMEG00000009290	-	76	36.527
ENSOMEG00000010334	rab34b	71	33.333	ENSOMEG00000017958	si:dkey-34d22.5	79	33.333
ENSOMEG00000010334	rab34b	65	35.404	ENSOMEG00000008191	rab12	65	36.250
ENSOMEG00000010334	rab34b	51	43.651	ENSOMEG00000013128	zgc:101559	54	43.651
ENSOMEG00000010334	rab34b	82	31.731	ENSOMEG00000002562	-	93	32.212
ENSOMEG00000010334	rab34b	61	34.225	ENSOMEG00000018494	-	75	34.225
ENSOMEG00000010334	rab34b	66	39.130	ENSOMEG00000004379	-	76	39.130
ENSOMEG00000010334	rab34b	66	37.888	ENSOMEG00000009074	-	78	37.888
ENSOMEG00000010334	rab34b	72	33.520	ENSOMEG00000023716	opn1sw2	86	33.520
ENSOMEG00000010334	rab34b	66	38.509	ENSOMEG00000017258	RAB41	75	38.509
ENSOMEG00000010334	rab34b	51	36.719	ENSOMEG00000020350	rab25b	61	36.719
ENSOMEG00000010334	rab34b	82	34.000	ENSOMEG00000014206	rab6ba	92	34.000
ENSOMEG00000010334	rab34b	68	37.349	ENSOMEG00000019462	RAB15	78	37.349
ENSOMEG00000010334	rab34b	78	31.053	ENSOMEG00000020605	rab18a	89	31.053
ENSOMEG00000010334	rab34b	82	32.673	ENSOMEG00000015474	si:dkey-16l2.16	99	32.547
ENSOMEG00000010334	rab34b	66	32.317	ENSOMEG00000009701	RAB9A	81	32.317
ENSOMEG00000010334	rab34b	51	38.400	ENSOMEG00000010510	rab25a	59	38.400
ENSOMEG00000010334	rab34b	74	33.696	ENSOMEG00000002581	rab11ba	78	34.239
ENSOMEG00000010334	rab34b	54	33.129	ENSOMEG00000017263	-	78	33.129
ENSOMEG00000010334	rab34b	66	37.267	ENSOMEG00000006036	rab1ab	78	37.267
ENSOMEG00000010334	rab34b	71	34.483	ENSOMEG00000020418	rab42a	79	34.483
ENSOMEG00000010334	rab34b	67	35.152	ENSOMEG00000016752	rab2a	76	35.152
ENSOMEG00000010334	rab34b	63	36.774	ENSOMEG00000017306	rab33a	56	36.774
ENSOMEG00000010334	rab34b	60	35.762	ENSOMEG00000008327	rab9b	71	35.256
ENSOMEG00000010334	rab34b	68	37.725	ENSOMEG00000003623	rab14	76	37.725
ENSOMEG00000010334	rab34b	65	38.750	ENSOMEG00000001613	rab30	77	38.750
ENSOMEG00000010334	rab34b	66	39.752	ENSOMEG00000020594	zgc:171927	74	39.752
ENSOMEG00000010334	rab34b	66	37.888	ENSOMEG00000023625	rab6bb	77	37.255
ENSOMEG00000010334	rab34b	65	39.375	ENSOMEG00000008210	rab13	79	39.375
ENSOMEG00000010334	rab34b	98	67.782	ENSOMEG00000003647	rab34a	83	68.127
ENSOMEG00000010334	rab34b	81	35.096	ENSOMEG00000017881	-	96	35.096
ENSOMEG00000010334	rab34b	65	35.000	ENSOMEG00000023078	rab5c	72	35.000
ENSOMEG00000010334	rab34b	73	32.584	ENSOMEG00000007546	rab18b	85	32.584
ENSOMEG00000010334	rab34b	67	36.747	ENSOMEG00000006333	RAB39B	77	36.747
ENSOMEG00000010334	rab34b	68	35.329	ENSOMEG00000022002	rab15	77	35.329

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000010334	rab34b	88	88.372	ENSAPOG00000019147	rab34b	96	80.693	Acanthochromis_polyacanthus
ENSOMEG00000010334	rab34b	98	73.750	ENSACIG00000004859	rab34b	99	76.096	Amphilophus_citrinellus
ENSOMEG00000010334	rab34b	96	82.773	ENSAOCG00000007106	rab34b	92	84.064	Amphiprion_ocellaris
ENSOMEG00000010334	rab34b	89	88.584	ENSAPEG00000018607	rab34b	86	83.750	Amphiprion_percula
ENSOMEG00000010334	rab34b	97	82.008	ENSATEG00000006851	rab34b	94	82.700	Anabas_testudineus
ENSOMEG00000010334	rab34b	98	85.597	ENSACLG00000005733	rab34b	97	86.434	Astatotilapia_calliptera
ENSOMEG00000010334	rab34b	96	72.881	ENSAMXG00000006018	rab34b	98	71.542	Astyanax_mexicanus
ENSOMEG00000010334	rab34b	91	80.000	ENSCSEG00000018133	rab34b	94	81.356	Cynoglossus_semilaevis
ENSOMEG00000010334	rab34b	96	74.153	ENSDARG00000010977	rab34b	98	73.413	Danio_rerio
ENSOMEG00000010334	rab34b	98	79.508	ENSELUG00000005597	rab34b	99	80.392	Esox_lucius
ENSOMEG00000010334	rab34b	98	84.362	ENSFHEG00000004532	rab34b	100	85.433	Fundulus_heteroclitus
ENSOMEG00000010334	rab34b	83	80.097	ENSGMOG00000007140	rab34b	100	80.097	Gadus_morhua
ENSOMEG00000010334	rab34b	98	84.426	ENSGACG00000020514	rab34b	100	85.603	Gasterosteus_aculeatus
ENSOMEG00000010334	rab34b	96	72.152	ENSIPUG00000024531	rab34	98	70.751	Ictalurus_punctatus
ENSOMEG00000010334	rab34b	98	85.185	ENSKMAG00000019341	rab34b	100	87.008	Kryptolebias_marmoratus
ENSOMEG00000010334	rab34b	98	83.402	ENSLBEG00000027819	rab34b	100	84.524	Labrus_bergylta
ENSOMEG00000010334	rab34b	96	85.593	ENSMAMG00000020214	rab34b	100	84.921	Mastacembelus_armatus
ENSOMEG00000010334	rab34b	98	82.500	ENSMMOG00000010936	rab34b	89	82.946	Mola_mola
ENSOMEG00000010334	rab34b	91	81.333	ENSMALG00000018499	rab34b	89	82.773	Monopterus_albus
ENSOMEG00000010334	rab34b	98	86.008	ENSONIG00000005519	rab34b	100	87.795	Oreochromis_niloticus
ENSOMEG00000010334	rab34b	98	96.250	ENSORLG00000003119	rab34b	96	95.402	Oryzias_latipes
ENSOMEG00000010334	rab34b	98	97.500	ENSORLG00020016139	rab34b	94	98.054	Oryzias_latipes_hni
ENSOMEG00000010334	rab34b	98	96.667	ENSORLG00015000584	rab34b	96	95.785	Oryzias_latipes_hsok
ENSOMEG00000010334	rab34b	98	70.902	ENSPKIG00000013326	rab34b	98	71.654	Paramormyrops_kingsleyae
ENSOMEG00000010334	rab34b	98	81.893	ENSPMGG00000021697	rab34b	99	83.465	Periophthalmus_magnuspinnatus
ENSOMEG00000010334	rab34b	98	83.951	ENSPFOG00000011444	rab34b	99	85.433	Poecilia_formosa
ENSOMEG00000010334	rab34b	98	83.951	ENSPLAG00000005074	rab34b	100	85.433	Poecilia_latipinna
ENSOMEG00000010334	rab34b	98	83.951	ENSPMEG00000013297	rab34b	100	85.433	Poecilia_mexicana
ENSOMEG00000010334	rab34b	98	83.951	ENSPREG00000009813	rab34b	100	85.433	Poecilia_reticulata
ENSOMEG00000010334	rab34b	84	87.864	ENSPNYG00000017153	rab34b	99	92.090	Pundamilia_nyererei
ENSOMEG00000010334	rab34b	94	74.786	ENSPNAG00000015040	rab34b	98	74.786	Pygocentrus_nattereri
ENSOMEG00000010334	rab34b	98	71.837	ENSSFOG00015005188	rab34	99	72.656	Scleropages_formosus
ENSOMEG00000010334	rab34b	95	83.333	ENSSMAG00000019926	rab34b	100	83.333	Scophthalmus_maximus
ENSOMEG00000010334	rab34b	98	87.295	ENSSDUG00000016760	rab34b	86	84.000	Seriola_dumerili
ENSOMEG00000010334	rab34b	76	92.432	ENSSLDG00000014812	rab34b	90	92.432	Seriola_lalandi_dorsalis
ENSOMEG00000010334	rab34b	96	84.034	ENSSPAG00000002801	rab34b	100	83.858	Stegastes_partitus
ENSOMEG00000010334	rab34b	91	84.375	ENSTRUG00000014481	rab34b	97	83.750	Takifugu_rubripes
ENSOMEG00000010334	rab34b	98	81.148	ENSTNIG00000016158	rab34b	99	81.569	Tetraodon_nigroviridis