EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000010424 (Gene tree)
Gene ID: 112150092
Gene Symbol: -
Alias: -
Full Name: calreticulin-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4911 bases
Position: chrNVQA01000014.1:16838368-16843278
Accession: 112150092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000027753	Calreticulin	PF00262.18	8.2e-84	1	2
ENSOMEP00000027753	Calreticulin	PF00262.18	8.2e-84	2	2
ENSOMEP00000027757	Calreticulin	PF00262.18	7.2e-78	1	2
ENSOMEP00000027757	Calreticulin	PF00262.18	7.2e-78	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000001149	-	2099	XM_024278091	ENSOMEP00000027753	425 (aa)	XP_024133859	UPI000CF7DF0C
ENSOMET00000001167	-	1176	-	ENSOMEP00000027757	391 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000010424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000010424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000010424	-	81	72.254	ENSOMEG00000007906	-	86	71.549
ENSOMEG00000010424	-	88	64.171	ENSOMEG00000012610	calr3b	85	64.525
ENSOMEG00000010424	-	60	64.591	ENSOMEG00000022510	-	60	65.737
ENSOMEG00000010424	-	80	38.424	ENSOMEG00000021923	clgn	62	37.838
ENSOMEG00000010424	-	79	39.394	ENSOMEG00000022389	canx	70	38.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000010424	-	89	84.433	ENSAMXG00000018577	-	86	84.298	Astyanax_mexicanus
ENSOMEG00000010424	-	82	79.598	ENSCAFG00000017093	CALR	89	77.624	Canis_familiaris
ENSOMEG00000010424	-	85	78.512	ENSCPBG00000023916	-	85	83.758	Chrysemys_picta_bellii
ENSOMEG00000010424	-	84	75.487	ENSDARG00000103979	calr3a	86	75.487	Danio_rerio
ENSOMEG00000010424	-	77	34.177	FBgn0264077	Cnx14D	61	33.503	Drosophila_melanogaster
ENSOMEG00000010424	-	87	67.568	FBgn0005585	Calr	87	67.416	Drosophila_melanogaster
ENSOMEG00000010424	-	85	69.697	ENSEBUG00000008568	calr3a	84	68.508	Eptatretus_burgeri
ENSOMEG00000010424	-	84	84.451	ENSELUG00000008294	-	86	84.451	Esox_lucius
ENSOMEG00000010424	-	89	84.238	ENSFHEG00000000123	-	85	84.722	Fundulus_heteroclitus
ENSOMEG00000010424	-	85	92.265	ENSMAMG00000003716	-	84	92.265	Mastacembelus_armatus
ENSOMEG00000010424	-	85	90.110	ENSMMOG00000020031	-	83	90.110	Mola_mola
ENSOMEG00000010424	-	81	79.769	ENSMLUG00000012776	-	85	78.090	Myotis_lucifugus
ENSOMEG00000010424	-	85	83.978	ENSORLG00000017171	-	84	83.978	Oryzias_latipes
ENSOMEG00000010424	-	83	39.518	ENSPSIG00000003895	-	72	38.889	Pelodiscus_sinensis
ENSOMEG00000010424	-	78	82.388	ENSPSIG00000012928	-	85	82.335	Pelodiscus_sinensis
ENSOMEG00000010424	-	78	37.783	ENSPSIG00000009344	-	61	38.579	Pelodiscus_sinensis
ENSOMEG00000010424	-	85	85.083	ENSPNAG00000016813	-	86	85.083	Pygocentrus_nattereri
ENSOMEG00000010424	-	88	71.123	ENSSMAG00000005047	calr3a	83	70.122	Scophthalmus_maximus
ENSOMEG00000010424	-	80	39.655	ENSSDUG00000002378	-	56	39.655	Seriola_dumerili
ENSOMEG00000010424	-	83	38.424	ENSSLDG00000020527	-	70	38.677	Seriola_lalandi_dorsalis
ENSOMEG00000010424	-	80	38.235	ENSTRUG00000003449	-	54	39.043	Takifugu_rubripes
ENSOMEG00000010424	-	85	86.464	ENSTRUG00000004597	-	84	86.464	Takifugu_rubripes
ENSOMEG00000010424	-	85	75.758	ENSXETG00000007937	calr	87	75.691	Xenopus_tropicalis