EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000010494 (Gene tree)
Gene ID: 112140496
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF26.1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4896 bases
Position: chrNVQA01004962.1:2021044-2025939
Accession: 112140496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000027829	zf-C2H2	PF00096.26	5.5e-18	1	1
ENSOMEP00000027829	zf-met	PF12874.7	3e-13	1	2
ENSOMEP00000027829	zf-met	PF12874.7	3e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000001017	-	3450	-	ENSOMEP00000027829	739 (aa)	XP_024119240	UPI000CF80CCE

Gene Model

Click here to download ENSOMEG00000010494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000010494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000010494	-	51	36.364	ENSOMEG00000022620	-	99	36.364
ENSOMEG00000010494	-	53	30.061	ENSOMEG00000009816	-	97	38.333
ENSOMEG00000010494	-	50	38.710	ENSOMEG00000019437	-	74	38.710
ENSOMEG00000010494	-	57	42.857	ENSOMEG00000014403	znf341	51	42.857
ENSOMEG00000010494	-	53	34.177	ENSOMEG00000008365	-	85	34.177
ENSOMEG00000010494	-	53	30.435	ENSOMEG00000022915	-	84	32.867
ENSOMEG00000010494	-	51	34.737	ENSOMEG00000005839	-	86	34.737
ENSOMEG00000010494	-	54	36.264	ENSOMEG00000006511	-	86	36.264
ENSOMEG00000010494	-	54	37.500	ENSOMEG00000015658	znf646	53	31.818
ENSOMEG00000010494	-	53	41.935	ENSOMEG00000019519	-	87	30.220
ENSOMEG00000010494	-	62	30.172	ENSOMEG00000018262	-	64	30.172
ENSOMEG00000010494	-	55	31.034	ENSOMEG00000023652	-	92	30.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000010494	-	58	45.376	ENSAMXG00000036181	-	55	44.581	Astyanax_mexicanus
ENSOMEG00000010494	-	84	50.858	ENSCSEG00000005462	-	99	46.543	Cynoglossus_semilaevis
ENSOMEG00000010494	-	90	56.125	ENSCVAG00000008425	-	95	56.897	Cyprinodon_variegatus
ENSOMEG00000010494	-	99	76.892	ENSORLG00000024487	-	99	77.689	Oryzias_latipes
ENSOMEG00000010494	-	99	76.494	ENSORLG00020002690	-	89	77.291	Oryzias_latipes_hni
ENSOMEG00000010494	-	99	77.291	ENSORLG00015018912	-	99	78.088	Oryzias_latipes_hsok
ENSOMEG00000010494	-	99	52.880	ENSSDUG00000013280	-	98	53.272	Seriola_dumerili