EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000010584 (Gene tree)
Gene ID: 112143371
Gene Symbol: rbfox1l
Alias: -
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 12307 bases
Position: chrNVQA01000006.1:7087042-7099348
Accession: 112143371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000009362	Fox-1_C	PF12414.8	1.6e-32	1	1
ENSOMEP00000009362	RRM_1	PF00076.22	9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000000891	-	1169	-	ENSOMEP00000009362	381 (aa)	XP_024123057	UPI000CF7FBAC

Gene Model

Click here to download ENSOMEG00000010584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000010584's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000010584	rbfox1l	63	64.368	ENSOMEG00000015966	rbfox2	56	62.934
ENSOMEG00000010584	rbfox1l	63	61.509	ENSOMEG00000007909	-	57	63.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000010584	rbfox1l	97	91.328	ENSAPOG00000016304	rbfox1l	98	91.328	Acanthochromis_polyacanthus
ENSOMEG00000010584	rbfox1l	100	84.595	ENSACIG00000006441	rbfox1l	100	83.812	Amphilophus_citrinellus
ENSOMEG00000010584	rbfox1l	88	88.024	ENSAOCG00000020938	rbfox1l	97	87.462	Amphiprion_ocellaris
ENSOMEG00000010584	rbfox1l	100	91.601	ENSAPEG00000008232	rbfox1l	100	91.601	Amphiprion_percula
ENSOMEG00000010584	rbfox1l	100	87.467	ENSATEG00000022649	rbfox1l	100	87.728	Anabas_testudineus
ENSOMEG00000010584	rbfox1l	65	73.123	ENSACAG00000011931	-	89	74.194	Anolis_carolinensis
ENSOMEG00000010584	rbfox1l	100	87.206	ENSACLG00000021394	rbfox1l	100	88.773	Astatotilapia_calliptera
ENSOMEG00000010584	rbfox1l	100	86.788	ENSAMXG00000010470	rbfox1l	100	83.938	Astyanax_mexicanus
ENSOMEG00000010584	rbfox1l	100	56.962	ENSCPBG00000010944	-	100	57.436	Chrysemys_picta_bellii
ENSOMEG00000010584	rbfox1l	100	88.021	ENSCSEG00000018898	rbfox1l	100	87.240	Cynoglossus_semilaevis
ENSOMEG00000010584	rbfox1l	100	90.289	ENSCVAG00000007986	rbfox1l	100	90.289	Cyprinodon_variegatus
ENSOMEG00000010584	rbfox1l	100	83.420	ENSDARG00000021184	rbfox1l	100	81.088	Danio_rerio
ENSOMEG00000010584	rbfox1l	100	81.170	ENSELUG00000015077	rbfox1l	100	82.443	Esox_lucius
ENSOMEG00000010584	rbfox1l	100	72.671	ENSFHEG00000016557	rbfox1l	95	95.122	Fundulus_heteroclitus
ENSOMEG00000010584	rbfox1l	100	83.029	ENSGMOG00000005040	rbfox1l	100	82.245	Gadus_morhua
ENSOMEG00000010584	rbfox1l	92	88.701	ENSGAFG00000013211	rbfox1l	97	88.701	Gambusia_affinis
ENSOMEG00000010584	rbfox1l	100	87.206	ENSGACG00000010757	rbfox1l	100	87.728	Gasterosteus_aculeatus
ENSOMEG00000010584	rbfox1l	66	70.866	ENSGAGG00000012440	-	84	71.837	Gopherus_agassizii
ENSOMEG00000010584	rbfox1l	100	87.206	ENSHBUG00000013406	rbfox1l	100	88.773	Haplochromis_burtoni
ENSOMEG00000010584	rbfox1l	100	84.375	ENSHCOG00000020771	rbfox1l	100	86.979	Hippocampus_comes
ENSOMEG00000010584	rbfox1l	99	80.577	ENSIPUG00000000065	rbfox1l	99	80.392	Ictalurus_punctatus
ENSOMEG00000010584	rbfox1l	100	88.312	ENSKMAG00000005146	rbfox1l	100	87.532	Kryptolebias_marmoratus
ENSOMEG00000010584	rbfox1l	100	90.339	ENSLBEG00000017089	rbfox1l	100	90.862	Labrus_bergylta
ENSOMEG00000010584	rbfox1l	100	89.295	ENSMAMG00000019480	rbfox1l	100	89.295	Mastacembelus_armatus
ENSOMEG00000010584	rbfox1l	100	87.206	ENSMZEG00005016374	rbfox1l	100	88.773	Maylandia_zebra
ENSOMEG00000010584	rbfox1l	100	88.251	ENSMMOG00000016530	rbfox1l	100	87.467	Mola_mola
ENSOMEG00000010584	rbfox1l	100	86.162	ENSMALG00000009384	rbfox1l	100	85.379	Monopterus_albus
ENSOMEG00000010584	rbfox1l	100	89.295	ENSNBRG00000003346	rbfox1l	100	88.512	Neolamprologus_brichardi
ENSOMEG00000010584	rbfox1l	100	87.728	ENSONIG00000012754	rbfox1l	100	89.295	Oreochromis_niloticus
ENSOMEG00000010584	rbfox1l	100	95.801	ENSORLG00000011269	rbfox1l	100	95.801	Oryzias_latipes
ENSOMEG00000010584	rbfox1l	100	96.588	ENSORLG00020000162	rbfox1l	100	96.588	Oryzias_latipes_hni
ENSOMEG00000010584	rbfox1l	100	96.588	ENSORLG00015013464	rbfox1l	100	96.588	Oryzias_latipes_hsok
ENSOMEG00000010584	rbfox1l	100	87.500	ENSPKIG00000012029	rbfox1l	100	84.896	Paramormyrops_kingsleyae
ENSOMEG00000010584	rbfox1l	100	82.984	ENSPMGG00000012082	rbfox1l	100	80.105	Periophthalmus_magnuspinnatus
ENSOMEG00000010584	rbfox1l	100	90.339	ENSPFOG00000009338	rbfox1l	100	90.339	Poecilia_formosa
ENSOMEG00000010584	rbfox1l	85	81.346	ENSPLAG00000012816	rbfox1l	92	81.046	Poecilia_latipinna
ENSOMEG00000010584	rbfox1l	100	86.162	ENSPMEG00000017597	rbfox1l	100	85.901	Poecilia_mexicana
ENSOMEG00000010584	rbfox1l	100	86.423	ENSPREG00000007940	rbfox1l	100	86.162	Poecilia_reticulata
ENSOMEG00000010584	rbfox1l	100	86.945	ENSPNYG00000002098	rbfox1l	100	89.556	Pundamilia_nyererei
ENSOMEG00000010584	rbfox1l	100	85.013	ENSPNAG00000001620	rbfox1l	100	81.395	Pygocentrus_nattereri
ENSOMEG00000010584	rbfox1l	100	81.039	ENSSFOG00015000675	rbfox1l	100	82.338	Scleropages_formosus
ENSOMEG00000010584	rbfox1l	100	86.945	ENSSMAG00000013090	rbfox1l	100	87.467	Scophthalmus_maximus
ENSOMEG00000010584	rbfox1l	100	85.861	ENSSDUG00000008705	rbfox1l	100	87.147	Seriola_dumerili
ENSOMEG00000010584	rbfox1l	100	88.402	ENSSLDG00000022256	rbfox1l	100	87.371	Seriola_lalandi_dorsalis
ENSOMEG00000010584	rbfox1l	100	92.388	ENSSPAG00000016620	rbfox1l	100	92.388	Stegastes_partitus
ENSOMEG00000010584	rbfox1l	96	85.405	ENSTRUG00000015905	rbfox1l	100	83.243	Takifugu_rubripes
ENSOMEG00000010584	rbfox1l	65	81.041	ENSTNIG00000008088	rbfox1l	97	83.588	Tetraodon_nigroviridis
ENSOMEG00000010584	rbfox1l	100	90.078	ENSXMAG00000023471	rbfox1l	100	90.078	Xiphophorus_maculatus