EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000010624 (Gene tree)
Gene ID: 112157345
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC112157345
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 3199 bases
Position: chrNVQA01000022.1:12940306-12943504
Accession: 112157345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000009426	zf-CCCH	PF00642.24	8.5e-05	1	1
ENSOMEP00000027889	zf-CCCH	PF00642.24	8.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000000791	-	3119	-	ENSOMEP00000009426	244 (aa)	XP_024145807	UPI000CF820F0
ENSOMET00000000807	-	3027	-	ENSOMEP00000027889	244 (aa)	XP_024145807	UPI000CF820F0

Gene Model

Click here to download ENSOMEG00000010624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000010624's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000010624	si:ch211-113e8.11	100	59.848	ENSAPOG00000010990	si:ch211-113e8.11	100	61.742	Acanthochromis_polyacanthus
ENSOMEG00000010624	si:ch211-113e8.11	58	66.207	ENSACIG00000011566	si:ch211-113e8.11	93	55.721	Amphilophus_citrinellus
ENSOMEG00000010624	si:ch211-113e8.11	100	61.450	ENSAOCG00000022156	si:ch211-113e8.11	100	60.687	Amphiprion_ocellaris
ENSOMEG00000010624	si:ch211-113e8.11	100	61.069	ENSAPEG00000018284	si:ch211-113e8.11	100	60.305	Amphiprion_percula
ENSOMEG00000010624	si:ch211-113e8.11	100	58.661	ENSATEG00000018391	si:ch211-113e8.11	100	56.809	Anabas_testudineus
ENSOMEG00000010624	si:ch211-113e8.11	100	59.600	ENSACLG00000017011	si:ch211-113e8.11	100	60.000	Astatotilapia_calliptera
ENSOMEG00000010624	si:ch211-113e8.11	97	49.805	ENSAMXG00000000733	si:ch211-113e8.11	97	51.362	Astyanax_mexicanus
ENSOMEG00000010624	si:ch211-113e8.11	99	57.364	ENSCSEG00000004538	si:ch211-113e8.11	99	56.589	Cynoglossus_semilaevis
ENSOMEG00000010624	si:ch211-113e8.11	100	57.200	ENSCVAG00000020156	si:ch211-113e8.11	99	56.627	Cyprinodon_variegatus
ENSOMEG00000010624	si:ch211-113e8.11	95	46.639	ENSDARG00000076585	si:ch211-113e8.11	97	47.500	Danio_rerio
ENSOMEG00000010624	si:ch211-113e8.11	58	32.450	FBgn0259728	CG42382	75	32.450	Drosophila_melanogaster
ENSOMEG00000010624	si:ch211-113e8.11	99	53.435	ENSELUG00000001130	si:ch211-113e8.11	99	53.053	Esox_lucius
ENSOMEG00000010624	si:ch211-113e8.11	100	53.441	ENSFHEG00000007870	si:ch211-113e8.11	99	53.441	Fundulus_heteroclitus
ENSOMEG00000010624	si:ch211-113e8.11	100	58.300	ENSGAFG00000020570	si:ch211-113e8.11	100	56.680	Gambusia_affinis
ENSOMEG00000010624	si:ch211-113e8.11	100	59.200	ENSHBUG00000003552	si:ch211-113e8.11	100	59.600	Haplochromis_burtoni
ENSOMEG00000010624	si:ch211-113e8.11	99	49.416	ENSHCOG00000002041	si:ch211-113e8.11	99	50.388	Hippocampus_comes
ENSOMEG00000010624	si:ch211-113e8.11	95	48.729	ENSIPUG00000002260	si:ch211-113e8.11	93	48.729	Ictalurus_punctatus
ENSOMEG00000010624	si:ch211-113e8.11	100	57.258	ENSKMAG00000000086	si:ch211-113e8.11	99	56.048	Kryptolebias_marmoratus
ENSOMEG00000010624	si:ch211-113e8.11	100	50.187	ENSLBEG00000008353	si:ch211-113e8.11	100	52.060	Labrus_bergylta
ENSOMEG00000010624	si:ch211-113e8.11	74	38.919	ENSLACG00000004304	si:ch211-113e8.11	74	41.611	Latimeria_chalumnae
ENSOMEG00000010624	si:ch211-113e8.11	97	54.800	ENSMAMG00000019098	si:ch211-113e8.11	92	58.333	Mastacembelus_armatus
ENSOMEG00000010624	si:ch211-113e8.11	100	60.643	ENSMZEG00005023658	si:ch211-113e8.11	100	61.044	Maylandia_zebra
ENSOMEG00000010624	si:ch211-113e8.11	71	62.147	ENSMMOG00000007254	si:ch211-113e8.11	100	52.632	Mola_mola
ENSOMEG00000010624	si:ch211-113e8.11	100	57.308	ENSMALG00000005110	si:ch211-113e8.11	100	55.985	Monopterus_albus
ENSOMEG00000010624	si:ch211-113e8.11	100	58.943	ENSNBRG00000015060	si:ch211-113e8.11	100	60.400	Neolamprologus_brichardi
ENSOMEG00000010624	si:ch211-113e8.11	100	81.377	ENSORLG00000023699	si:ch211-113e8.11	100	81.377	Oryzias_latipes
ENSOMEG00000010624	si:ch211-113e8.11	100	81.452	ENSORLG00020022094	si:ch211-113e8.11	100	81.452	Oryzias_latipes_hni
ENSOMEG00000010624	si:ch211-113e8.11	100	81.377	ENSORLG00015002588	si:ch211-113e8.11	100	81.377	Oryzias_latipes_hsok
ENSOMEG00000010624	si:ch211-113e8.11	71	47.429	ENSPKIG00000023576	si:ch211-113e8.11	96	43.983	Paramormyrops_kingsleyae
ENSOMEG00000010624	si:ch211-113e8.11	96	53.846	ENSPMGG00000018547	si:ch211-113e8.11	97	51.695	Periophthalmus_magnuspinnatus
ENSOMEG00000010624	si:ch211-113e8.11	98	59.504	ENSPFOG00000007950	si:ch211-113e8.11	100	58.197	Poecilia_formosa
ENSOMEG00000010624	si:ch211-113e8.11	100	59.677	ENSPLAG00000002081	si:ch211-113e8.11	100	58.065	Poecilia_latipinna
ENSOMEG00000010624	si:ch211-113e8.11	100	59.677	ENSPMEG00000017505	si:ch211-113e8.11	100	58.065	Poecilia_mexicana
ENSOMEG00000010624	si:ch211-113e8.11	100	59.514	ENSPREG00000008530	si:ch211-113e8.11	100	60.241	Poecilia_reticulata
ENSOMEG00000010624	si:ch211-113e8.11	100	60.000	ENSPNYG00000022856	si:ch211-113e8.11	100	60.400	Pundamilia_nyererei
ENSOMEG00000010624	si:ch211-113e8.11	98	43.548	ENSPNAG00000013782	si:ch211-113e8.11	99	46.000	Pygocentrus_nattereri
ENSOMEG00000010624	si:ch211-113e8.11	97	45.763	ENSSFOG00015000959	si:ch211-113e8.11	97	43.983	Scleropages_formosus
ENSOMEG00000010624	si:ch211-113e8.11	100	59.127	ENSSMAG00000009732	si:ch211-113e8.11	100	58.730	Scophthalmus_maximus
ENSOMEG00000010624	si:ch211-113e8.11	100	64.567	ENSSDUG00000000112	si:ch211-113e8.11	100	64.567	Seriola_dumerili
ENSOMEG00000010624	si:ch211-113e8.11	100	62.598	ENSSLDG00000003287	si:ch211-113e8.11	100	62.598	Seriola_lalandi_dorsalis
ENSOMEG00000010624	si:ch211-113e8.11	100	58.915	ENSSPAG00000001375	si:ch211-113e8.11	100	59.690	Stegastes_partitus
ENSOMEG00000010624	si:ch211-113e8.11	99	53.279	ENSTRUG00000023898	si:ch211-113e8.11	99	53.279	Takifugu_rubripes
ENSOMEG00000010624	si:ch211-113e8.11	100	58.704	ENSXMAG00000024104	si:ch211-113e8.11	100	56.680	Xiphophorus_maculatus