EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000010730 (Gene tree)
Gene ID: 112157119
Gene Symbol: rbm47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 34884 bases
Position: chrNVQA01000022.1:12899826-12934709
Accession: 112157119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000009456	RRM_1	PF00076.22	1.3e-40	1	3
ENSOMEP00000009456	RRM_1	PF00076.22	1.3e-40	2	3
ENSOMEP00000009456	RRM_1	PF00076.22	1.3e-40	3	3
ENSOMEP00000009503	RRM_1	PF00076.22	1.5e-40	1	3
ENSOMEP00000009503	RRM_1	PF00076.22	1.5e-40	2	3
ENSOMEP00000009503	RRM_1	PF00076.22	1.5e-40	3	3
ENSOMEP00000009472	RRM_1	PF00076.22	1.6e-40	1	3
ENSOMEP00000009472	RRM_1	PF00076.22	1.6e-40	2	3
ENSOMEP00000009472	RRM_1	PF00076.22	1.6e-40	3	3
ENSOMEP00000009492	RRM_1	PF00076.22	1.6e-40	1	3
ENSOMEP00000009492	RRM_1	PF00076.22	1.6e-40	2	3
ENSOMEP00000009492	RRM_1	PF00076.22	1.6e-40	3	3
ENSOMEP00000009514	RRM_1	PF00076.22	1.6e-40	1	3
ENSOMEP00000009514	RRM_1	PF00076.22	1.6e-40	2	3
ENSOMEP00000009514	RRM_1	PF00076.22	1.6e-40	3	3
ENSOMEP00000027935	RRM_1	PF00076.22	1.6e-40	1	3
ENSOMEP00000027935	RRM_1	PF00076.22	1.6e-40	2	3
ENSOMEP00000027935	RRM_1	PF00076.22	1.6e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000000697	-	5816	XM_024289676	ENSOMEP00000027935	611 (aa)	XP_024145444	UPI000CF7CA30
ENSOMET00000000643	-	5885	XM_024289670	ENSOMEP00000009514	611 (aa)	XP_024145438	UPI000CF7CA30
ENSOMET00000000677	-	5547	XM_024289674	ENSOMEP00000009492	611 (aa)	XP_024145442	UPI000CF7CA30
ENSOMET00000000737	-	1767	-	ENSOMEP00000009456	588 (aa)	-	-
ENSOMET00000000712	-	5509	XM_024289673	ENSOMEP00000009472	611 (aa)	XP_024145441	UPI000CF7CA30
ENSOMET00000000659	-	5861	XM_024289678	ENSOMEP00000009503	603 (aa)	XP_024145446	UPI000CF7D596

Gene Model

Click here to download ENSOMEG00000010730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000010730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000010730	rbm47	53	52.381	ENSOMEG00000009597	syncripl	77	44.893
ENSOMEG00000010730	rbm47	53	50.476	ENSOMEG00000018227	syncrip	64	44.952
ENSOMEG00000010730	rbm47	51	54.605	ENSOMEG00000007244	hnrnpr	68	45.540
ENSOMEG00000010730	rbm47	82	50.995	ENSOMEG00000013531	a1cf	87	52.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000010730	rbm47	100	81.117	ENSG00000163694	RBM47	100	86.636	Homo_sapiens
ENSOMEG00000010730	rbm47	100	94.344	ENSAPOG00000011062	rbm47	100	94.344	Acanthochromis_polyacanthus
ENSOMEG00000010730	rbm47	100	74.875	ENSAMEG00000009672	RBM47	100	78.369	Ailuropoda_melanoleuca
ENSOMEG00000010730	rbm47	100	92.712	ENSACIG00000011531	rbm47	100	92.881	Amphilophus_citrinellus
ENSOMEG00000010730	rbm47	100	94.087	ENSAOCG00000022245	rbm47	100	94.207	Amphiprion_ocellaris
ENSOMEG00000010730	rbm47	100	94.087	ENSAPEG00000018304	rbm47	100	94.207	Amphiprion_percula
ENSOMEG00000010730	rbm47	100	91.240	ENSATEG00000018400	rbm47	100	91.405	Anabas_testudineus
ENSOMEG00000010730	rbm47	100	77.090	ENSAPLG00000013974	RBM47	100	77.258	Anas_platyrhynchos
ENSOMEG00000010730	rbm47	100	74.917	ENSACAG00000011833	RBM47	100	75.788	Anolis_carolinensis
ENSOMEG00000010730	rbm47	100	83.511	ENSANAG00000029440	RBM47	100	81.234	Aotus_nancymaae
ENSOMEG00000010730	rbm47	100	91.461	ENSACLG00000016902	rbm47	100	93.782	Astatotilapia_calliptera
ENSOMEG00000010730	rbm47	100	83.607	ENSAMXG00000021794	rbm47	100	83.607	Astyanax_mexicanus
ENSOMEG00000010730	rbm47	100	77.349	ENSBTAG00000002356	RBM47	100	79.027	Bos_taurus
ENSOMEG00000010730	rbm47	97	85.393	ENSCJAG00000019385	RBM47	100	84.840	Callithrix_jacchus
ENSOMEG00000010730	rbm47	97	76.829	ENSCAFG00000015898	RBM47	100	77.592	Canis_familiaris
ENSOMEG00000010730	rbm47	82	79.430	ENSCAFG00020010558	RBM47	94	82.493	Canis_lupus_dingo
ENSOMEG00000010730	rbm47	100	77.349	ENSCHIG00000026214	RBM47	100	79.027	Capra_hircus
ENSOMEG00000010730	rbm47	87	85.398	ENSTSYG00000033612	RBM47	93	85.398	Carlito_syrichta
ENSOMEG00000010730	rbm47	100	72.437	ENSCAPG00000008426	RBM47	100	75.401	Cavia_aperea
ENSOMEG00000010730	rbm47	100	83.467	ENSCPOG00000014100	RBM47	100	84.533	Cavia_porcellus
ENSOMEG00000010730	rbm47	100	84.309	ENSCCAG00000030129	-	100	84.309	Cebus_capucinus
ENSOMEG00000010730	rbm47	99	55.705	ENSCCAG00000024397	-	99	55.705	Cebus_capucinus
ENSOMEG00000010730	rbm47	100	81.117	ENSCATG00000042064	RBM47	100	84.840	Cercocebus_atys
ENSOMEG00000010730	rbm47	100	82.493	ENSCLAG00000001684	RBM47	100	85.067	Chinchilla_lanigera
ENSOMEG00000010730	rbm47	100	75.418	ENSCSAG00000017060	RBM47	100	78.500	Chlorocebus_sabaeus
ENSOMEG00000010730	rbm47	89	75.000	ENSCHOG00000011731	RBM47	88	77.079	Choloepus_hoffmanni
ENSOMEG00000010730	rbm47	100	78.428	ENSCPBG00000013831	RBM47	100	79.299	Chrysemys_picta_bellii
ENSOMEG00000010730	rbm47	100	82.011	ENSCANG00000019997	RBM47	100	84.574	Colobus_angolensis_palliatus
ENSOMEG00000010730	rbm47	100	76.658	ENSCGRG00001020102	-	100	78.249	Cricetulus_griseus_chok1gshd
ENSOMEG00000010730	rbm47	100	81.915	ENSCGRG00001000623	-	100	82.979	Cricetulus_griseus_chok1gshd
ENSOMEG00000010730	rbm47	100	74.709	ENSCGRG00000007762	-	100	81.013	Cricetulus_griseus_crigri
ENSOMEG00000010730	rbm47	100	76.127	ENSCGRG00000014760	-	100	77.719	Cricetulus_griseus_crigri
ENSOMEG00000010730	rbm47	100	89.340	ENSCSEG00000004545	rbm47	100	89.340	Cynoglossus_semilaevis
ENSOMEG00000010730	rbm47	100	90.492	ENSCVAG00000020144	rbm47	100	92.031	Cyprinodon_variegatus
ENSOMEG00000010730	rbm47	100	82.208	ENSDARG00000061985	rbm47	100	83.361	Danio_rerio
ENSOMEG00000010730	rbm47	100	77.066	ENSDNOG00000046854	RBM47	100	79.427	Dasypus_novemcinctus
ENSOMEG00000010730	rbm47	100	76.578	ENSDORG00000010144	Rbm47	100	77.741	Dipodomys_ordii
ENSOMEG00000010730	rbm47	100	76.294	ENSETEG00000009194	RBM47	100	78.130	Echinops_telfairi
ENSOMEG00000010730	rbm47	99	58.278	ENSEBUG00000011912	rbm47	99	58.113	Eptatretus_burgeri
ENSOMEG00000010730	rbm47	100	76.846	ENSEASG00005008443	RBM47	100	79.195	Equus_asinus_asinus
ENSOMEG00000010730	rbm47	100	76.846	ENSECAG00000004400	RBM47	100	79.195	Equus_caballus
ENSOMEG00000010730	rbm47	75	83.983	ENSEEUG00000001194	RBM47	75	85.714	Erinaceus_europaeus
ENSOMEG00000010730	rbm47	100	80.945	ENSELUG00000006148	rbm47	100	87.817	Esox_lucius
ENSOMEG00000010730	rbm47	100	76.639	ENSFCAG00000012399	RBM47	100	79.630	Felis_catus
ENSOMEG00000010730	rbm47	100	77.833	ENSFALG00000002861	RBM47	100	78.667	Ficedula_albicollis
ENSOMEG00000010730	rbm47	100	81.333	ENSFDAG00000016326	RBM47	100	76.263	Fukomys_damarensis
ENSOMEG00000010730	rbm47	100	89.116	ENSFHEG00000007938	rbm47	100	88.776	Fundulus_heteroclitus
ENSOMEG00000010730	rbm47	100	81.230	ENSGMOG00000014802	rbm47	100	81.230	Gadus_morhua
ENSOMEG00000010730	rbm47	63	85.411	ENSGALG00000014267	RBM47	100	85.411	Gallus_gallus
ENSOMEG00000010730	rbm47	63	91.398	ENSGAFG00000020571	rbm47	98	91.398	Gambusia_affinis
ENSOMEG00000010730	rbm47	100	89.439	ENSGACG00000016223	rbm47	100	91.260	Gasterosteus_aculeatus
ENSOMEG00000010730	rbm47	100	78.428	ENSGAGG00000020051	RBM47	100	79.299	Gopherus_agassizii
ENSOMEG00000010730	rbm47	100	81.117	ENSGGOG00000001367	RBM47	100	84.840	Gorilla_gorilla
ENSOMEG00000010730	rbm47	100	90.998	ENSHBUG00000003520	rbm47	100	93.782	Haplochromis_burtoni
ENSOMEG00000010730	rbm47	84	63.733	ENSHGLG00000016914	RBM47	100	81.013	Heterocephalus_glaber_female
ENSOMEG00000010730	rbm47	100	69.514	ENSHGLG00100003071	-	100	69.514	Heterocephalus_glaber_male
ENSOMEG00000010730	rbm47	100	82.400	ENSHGLG00100014028	-	100	82.400	Heterocephalus_glaber_male
ENSOMEG00000010730	rbm47	99	92.031	ENSHCOG00000002074	rbm47	99	92.031	Hippocampus_comes
ENSOMEG00000010730	rbm47	100	84.095	ENSIPUG00000004743	rbm47	100	85.110	Ictalurus_punctatus
ENSOMEG00000010730	rbm47	100	80.902	ENSSTOG00000004727	RBM47	100	81.701	Ictidomys_tridecemlineatus
ENSOMEG00000010730	rbm47	100	75.707	ENSJJAG00000013823	Rbm47	100	77.409	Jaculus_jaculus
ENSOMEG00000010730	rbm47	100	90.164	ENSKMAG00000000084	rbm47	100	91.795	Kryptolebias_marmoratus
ENSOMEG00000010730	rbm47	100	90.694	ENSLBEG00000008436	rbm47	100	91.940	Labrus_bergylta
ENSOMEG00000010730	rbm47	100	78.319	ENSLACG00000007196	RBM47	100	79.027	Latimeria_chalumnae
ENSOMEG00000010730	rbm47	100	83.474	ENSLOCG00000012966	rbm47	95	84.343	Lepisosteus_oculatus
ENSOMEG00000010730	rbm47	100	77.496	ENSLAFG00000011998	RBM47	100	78.392	Loxodonta_africana
ENSOMEG00000010730	rbm47	100	81.117	ENSMFAG00000037967	RBM47	100	84.840	Macaca_fascicularis
ENSOMEG00000010730	rbm47	100	75.418	ENSMMUG00000012036	RBM47	100	84.974	Macaca_mulatta
ENSOMEG00000010730	rbm47	100	81.117	ENSMNEG00000040774	RBM47	100	84.840	Macaca_nemestrina
ENSOMEG00000010730	rbm47	100	83.810	ENSMLEG00000041432	RBM47	100	86.667	Mandrillus_leucophaeus
ENSOMEG00000010730	rbm47	100	91.542	ENSMAMG00000019143	rbm47	100	93.523	Mastacembelus_armatus
ENSOMEG00000010730	rbm47	100	91.461	ENSMZEG00005023659	rbm47	100	93.655	Maylandia_zebra
ENSOMEG00000010730	rbm47	100	77.833	ENSMGAG00000012226	RBM47	100	78.702	Meleagris_gallopavo
ENSOMEG00000010730	rbm47	100	81.432	ENSMAUG00000006493	Rbm47	100	82.493	Mesocricetus_auratus
ENSOMEG00000010730	rbm47	100	79.893	ENSMICG00000026417	RBM47	100	82.275	Microcebus_murinus
ENSOMEG00000010730	rbm47	100	81.649	ENSMOCG00000021170	Rbm47	100	82.713	Microtus_ochrogaster
ENSOMEG00000010730	rbm47	100	90.232	ENSMMOG00000007260	rbm47	100	90.232	Mola_mola
ENSOMEG00000010730	rbm47	100	77.629	ENSMODG00000007003	RBM47	100	78.130	Monodelphis_domestica
ENSOMEG00000010730	rbm47	100	74.493	ENSMODG00000020561	-	100	75.169	Monodelphis_domestica
ENSOMEG00000010730	rbm47	52	78.317	ENSMODG00000015426	-	97	78.135	Monodelphis_domestica
ENSOMEG00000010730	rbm47	100	93.282	ENSMALG00000005167	rbm47	100	93.282	Monopterus_albus
ENSOMEG00000010730	rbm47	100	81.383	MGP_CAROLIEiJ_G0027258	Rbm47	100	82.447	Mus_caroli
ENSOMEG00000010730	rbm47	100	81.383	ENSMUSG00000070780	Rbm47	100	82.447	Mus_musculus
ENSOMEG00000010730	rbm47	100	81.649	MGP_PahariEiJ_G0017040	Rbm47	100	82.713	Mus_pahari
ENSOMEG00000010730	rbm47	100	81.383	MGP_SPRETEiJ_G0028253	Rbm47	100	80.463	Mus_spretus
ENSOMEG00000010730	rbm47	100	75.753	ENSMPUG00000006177	RBM47	94	78.428	Mustela_putorius_furo
ENSOMEG00000010730	rbm47	100	75.793	ENSMLUG00000000889	RBM47	100	76.923	Myotis_lucifugus
ENSOMEG00000010730	rbm47	100	75.333	ENSNGAG00000003325	Rbm47	100	76.667	Nannospalax_galili
ENSOMEG00000010730	rbm47	100	90.984	ENSNBRG00000015092	rbm47	100	90.984	Neolamprologus_brichardi
ENSOMEG00000010730	rbm47	100	81.117	ENSNLEG00000017151	RBM47	100	84.840	Nomascus_leucogenys
ENSOMEG00000010730	rbm47	73	79.535	ENSMEUG00000009516	-	100	79.535	Notamacropus_eugenii
ENSOMEG00000010730	rbm47	76	85.062	ENSOPRG00000016507	-	75	85.062	Ochotona_princeps
ENSOMEG00000010730	rbm47	100	76.134	ENSODEG00000004873	RBM47	100	78.319	Octodon_degus
ENSOMEG00000010730	rbm47	100	90.789	ENSONIG00000009061	rbm47	100	91.118	Oreochromis_niloticus
ENSOMEG00000010730	rbm47	100	76.667	ENSOANG00000008978	RBM47	100	78.167	Ornithorhynchus_anatinus
ENSOMEG00000010730	rbm47	100	76.510	ENSOCUG00000012034	RBM47	100	78.020	Oryctolagus_cuniculus
ENSOMEG00000010730	rbm47	100	96.774	ENSORLG00000005847	rbm47	100	97.933	Oryzias_latipes
ENSOMEG00000010730	rbm47	100	96.604	ENSORLG00020005154	rbm47	100	97.933	Oryzias_latipes_hni
ENSOMEG00000010730	rbm47	100	96.604	ENSORLG00015000066	rbm47	100	98.191	Oryzias_latipes_hsok
ENSOMEG00000010730	rbm47	100	75.585	ENSOGAG00000029367	-	100	78.261	Otolemur_garnettii
ENSOMEG00000010730	rbm47	100	70.707	ENSOGAG00000025193	-	100	72.559	Otolemur_garnettii
ENSOMEG00000010730	rbm47	100	69.799	ENSOARG00000012711	RBM47	100	71.309	Ovis_aries
ENSOMEG00000010730	rbm47	100	76.351	ENSPPAG00000029763	RBM47	95	84.840	Pan_paniscus
ENSOMEG00000010730	rbm47	100	75.294	ENSPPRG00000012873	RBM47	100	84.533	Panthera_pardus
ENSOMEG00000010730	rbm47	85	76.938	ENSPTIG00000017046	RBM47	100	77.137	Panthera_tigris_altaica
ENSOMEG00000010730	rbm47	100	81.117	ENSPTRG00000016006	RBM47	100	84.840	Pan_troglodytes
ENSOMEG00000010730	rbm47	100	81.117	ENSPANG00000005980	RBM47	100	84.840	Papio_anubis
ENSOMEG00000010730	rbm47	97	82.024	ENSPKIG00000005037	rbm47	100	79.703	Paramormyrops_kingsleyae
ENSOMEG00000010730	rbm47	97	77.487	ENSPKIG00000013431	RBM47	98	85.567	Paramormyrops_kingsleyae
ENSOMEG00000010730	rbm47	89	80.907	ENSPSIG00000017516	RBM47	97	80.907	Pelodiscus_sinensis
ENSOMEG00000010730	rbm47	100	89.796	ENSPMGG00000018540	rbm47	100	89.796	Periophthalmus_magnuspinnatus
ENSOMEG00000010730	rbm47	100	81.649	ENSPEMG00000011088	Rbm47	100	82.713	Peromyscus_maniculatus_bairdii
ENSOMEG00000010730	rbm47	100	88.235	ENSPFOG00000007997	rbm47	100	88.235	Poecilia_formosa
ENSOMEG00000010730	rbm47	100	88.216	ENSPLAG00000002072	rbm47	100	91.375	Poecilia_latipinna
ENSOMEG00000010730	rbm47	100	88.889	ENSPMEG00000017492	rbm47	100	90.231	Poecilia_mexicana
ENSOMEG00000010730	rbm47	100	88.368	ENSPREG00000008456	rbm47	100	91.644	Poecilia_reticulata
ENSOMEG00000010730	rbm47	96	68.977	ENSPPYG00000014688	RBM47	98	69.948	Pongo_abelii
ENSOMEG00000010730	rbm47	81	80.952	ENSPCAG00000011879	RBM47	81	83.459	Procavia_capensis
ENSOMEG00000010730	rbm47	100	80.851	ENSPCOG00000023451	RBM47	100	80.670	Propithecus_coquereli
ENSOMEG00000010730	rbm47	100	75.459	ENSPVAG00000003812	RBM47	100	78.130	Pteropus_vampyrus
ENSOMEG00000010730	rbm47	100	90.850	ENSPNYG00000022868	rbm47	100	90.850	Pundamilia_nyererei
ENSOMEG00000010730	rbm47	100	83.580	ENSPNAG00000007940	rbm47	100	84.401	Pygocentrus_nattereri
ENSOMEG00000010730	rbm47	100	75.418	ENSRNOG00000002408	Rbm47	100	77.425	Rattus_norvegicus
ENSOMEG00000010730	rbm47	100	82.011	ENSRBIG00000039601	RBM47	100	84.574	Rhinopithecus_bieti
ENSOMEG00000010730	rbm47	100	82.011	ENSRROG00000044696	RBM47	100	84.574	Rhinopithecus_roxellana
ENSOMEG00000010730	rbm47	100	75.211	ENSSBOG00000028475	RBM47	100	81.481	Saimiri_boliviensis_boliviensis
ENSOMEG00000010730	rbm47	100	78.992	ENSSHAG00000017576	RBM47	100	79.832	Sarcophilus_harrisii
ENSOMEG00000010730	rbm47	99	80.546	ENSSFOG00015024101	RBM47	100	79.599	Scleropages_formosus
ENSOMEG00000010730	rbm47	100	79.339	ENSSFOG00015012445	rbm47	100	78.678	Scleropages_formosus
ENSOMEG00000010730	rbm47	100	90.232	ENSSMAG00000009744	rbm47	100	92.765	Scophthalmus_maximus
ENSOMEG00000010730	rbm47	100	91.326	ENSSDUG00000022684	rbm47	99	93.139	Seriola_dumerili
ENSOMEG00000010730	rbm47	100	92.190	ENSSLDG00000003109	rbm47	100	92.360	Seriola_lalandi_dorsalis
ENSOMEG00000010730	rbm47	75	79.733	ENSSARG00000001735	RBM47	84	82.183	Sorex_araneus
ENSOMEG00000010730	rbm47	100	82.895	ENSSPUG00000007515	RBM47	100	83.333	Sphenodon_punctatus
ENSOMEG00000010730	rbm47	100	94.344	ENSSPAG00000001257	rbm47	100	94.458	Stegastes_partitus
ENSOMEG00000010730	rbm47	100	81.746	ENSSSCG00000008796	RBM47	100	79.027	Sus_scrofa
ENSOMEG00000010730	rbm47	100	78.057	ENSTGUG00000008705	RBM47	100	78.894	Taeniopygia_guttata
ENSOMEG00000010730	rbm47	100	88.946	ENSTRUG00000014050	rbm47	100	88.946	Takifugu_rubripes
ENSOMEG00000010730	rbm47	100	90.050	ENSTNIG00000006127	rbm47	100	90.050	Tetraodon_nigroviridis
ENSOMEG00000010730	rbm47	77	80.214	ENSTBEG00000001607	RBM47	76	82.400	Tupaia_belangeri
ENSOMEG00000010730	rbm47	100	78.114	ENSTTRG00000002839	RBM47	100	79.461	Tursiops_truncatus
ENSOMEG00000010730	rbm47	100	76.589	ENSUAMG00000021346	RBM47	100	78.763	Ursus_americanus
ENSOMEG00000010730	rbm47	52	83.333	ENSVPAG00000000641	-	56	82.759	Vicugna_pacos
ENSOMEG00000010730	rbm47	97	77.138	ENSVVUG00000014774	RBM47	100	77.722	Vulpes_vulpes
ENSOMEG00000010730	rbm47	100	76.589	ENSXETG00000012802	rbm47	100	76.923	Xenopus_tropicalis
ENSOMEG00000010730	rbm47	100	91.644	ENSXCOG00000000780	rbm47	100	91.644	Xiphophorus_couchianus
ENSOMEG00000010730	rbm47	100	90.488	ENSXMAG00000009874	rbm47	100	90.488	Xiphophorus_maculatus