EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000011040 (Gene tree)
Gene ID
112141629
Gene Symbol
RPA1 (1 of many)
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Plus strand
Length
83112 bases
Position
chrNVQA01000005.1:15367818-15450929
Accession
10289
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000028132tRNA_anti-codonPF01336.251.1e-1111
ENSOMEP00000009672tRNA_anti-codonPF01336.252e-1111
ENSOMEP00000009798tRNA_anti-codonPF01336.252.7e-1111
ENSOMEP00000028088tRNA_anti-codonPF01336.252.8e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000000300RPA1 (1 of many)-2042640-ENSOMEP00000028088616 (aa)--
ENSOMET00000000257RPA1 (1 of many)-2032653-ENSOMEP00000009748649 (aa)--
ENSOMET00000000192RPA1 (1 of many)-2022045-ENSOMEP00000028132648 (aa)--
ENSOMET00000000164RPA1 (1 of many)-2012169-ENSOMEP00000009798622 (aa)--
ENSOMET00000000361RPA1 (1 of many)-2051668-ENSOMEP00000009672555 (aa)--
Gene Model
Click here to download ENSOMEG00000011040's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000011040's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000011040RPA19959.545ENSOMEG00000004704rpa19559.545
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000011040RPA19960.391ENSAPOG00000011658rpa19960.391Acanthochromis_polyacanthus
ENSOMEG00000011040RPA19868.627ENSAPOG00000019409RPA19669.277Acanthochromis_polyacanthus
ENSOMEG00000011040RPA19957.612ENSAMEG00000007706RPA19357.612Ailuropoda_melanoleuca
ENSOMEG00000011040RPA19953.792ENSACIG00000007277rpa19853.792Amphilophus_citrinellus
ENSOMEG00000011040RPA19974.017ENSACIG00000012881RPA19974.017Amphilophus_citrinellus
ENSOMEG00000011040RPA19960.035ENSAOCG00000023376rpa19960.035Amphiprion_ocellaris
ENSOMEG00000011040RPA19872.713ENSAOCG00000009003RPA19673.397Amphiprion_ocellaris
ENSOMEG00000011040RPA19871.384ENSAPEG00000019132RPA19672.057Amphiprion_percula
ENSOMEG00000011040RPA19960.140ENSAPEG00000008634rpa19959.752Amphiprion_percula
ENSOMEG00000011040RPA19960.036ENSATEG00000022024rpa19960.036Anabas_testudineus
ENSOMEG00000011040RPA19870.701ENSATEG00000006443RPA19967.879Anabas_testudineus
ENSOMEG00000011040RPA19957.180ENSAPLG00000012442RPA19257.180Anas_platyrhynchos
ENSOMEG00000011040RPA19952.622ENSACAG00000014490RPA19452.797Anolis_carolinensis
ENSOMEG00000011040RPA19957.368ENSANAG00000023456RPA19756.873Aotus_nancymaae
ENSOMEG00000011040RPA19874.225ENSACLG00000005223RPA19972.126Astatotilapia_calliptera
ENSOMEG00000011040RPA19861.319ENSACLG00000006640rpa19961.319Astatotilapia_calliptera
ENSOMEG00000011040RPA19959.266ENSAMXG00000008418rpa19858.627Astyanax_mexicanus
ENSOMEG00000011040RPA110056.441ENSBTAG00000009711RPA19954.226Bos_taurus
ENSOMEG00000011040RPA19957.045ENSCJAG00000001848RPA19457.045Callithrix_jacchus
ENSOMEG00000011040RPA19956.336ENSCAFG00000019249RPA19953.470Canis_familiaris
ENSOMEG00000011040RPA19956.336ENSCAFG00020009847RPA19953.470Canis_lupus_dingo
ENSOMEG00000011040RPA110055.746ENSCHIG00000026308RPA19954.067Capra_hircus
ENSOMEG00000011040RPA19956.826ENSTSYG00000003482-9953.397Carlito_syrichta
ENSOMEG00000011040RPA19956.357ENSCPOG00000000035RPA19654.934Cavia_porcellus
ENSOMEG00000011040RPA19949.123ENSCCAG00000010981RPA19449.123Cebus_capucinus
ENSOMEG00000011040RPA19953.425ENSCLAG00000015045-9453.425Chinchilla_lanigera
ENSOMEG00000011040RPA19957.436ENSCLAG00000005185-9557.436Chinchilla_lanigera
ENSOMEG00000011040RPA19948.687ENSCSAG00000013833RPA19945.800Chlorocebus_sabaeus
ENSOMEG00000011040RPA17662.844ENSCHOG00000009454-9962.989Choloepus_hoffmanni
ENSOMEG00000011040RPA19955.308ENSCHOG00000013540-9955.308Choloepus_hoffmanni
ENSOMEG00000011040RPA19956.633ENSCPBG00000020377RPA19957.217Chrysemys_picta_bellii
ENSOMEG00000011040RPA19943.409ENSCING00000023482-9343.409Ciona_intestinalis
ENSOMEG00000011040RPA19957.018ENSCANG00000030911RPA19657.018Colobus_angolensis_palliatus
ENSOMEG00000011040RPA19857.266ENSCGRG00001008197Rpa19655.665Cricetulus_griseus_chok1gshd
ENSOMEG00000011040RPA18158.750ENSCGRG00000000582Rpa19458.750Cricetulus_griseus_crigri
ENSOMEG00000011040RPA19959.545ENSCSEG00000013066rpa19659.545Cynoglossus_semilaevis
ENSOMEG00000011040RPA19961.655ENSCSEG00000012726RPA19962.306Cynoglossus_semilaevis
ENSOMEG00000011040RPA19958.957ENSCVAG00000019431rpa19959.187Cyprinodon_variegatus
ENSOMEG00000011040RPA19772.057ENSCVAG00000013446-9968.909Cyprinodon_variegatus
ENSOMEG00000011040RPA19960.490ENSDARG00000003938rpa19956.891Danio_rerio
ENSOMEG00000011040RPA19956.089ENSDNOG00000017218RPA19456.089Dasypus_novemcinctus
ENSOMEG00000011040RPA19958.433ENSDORG00000006199Rpa19658.333Dipodomys_ordii
ENSOMEG00000011040RPA19840.636FBgn0010173RpA-709538.585Drosophila_melanogaster
ENSOMEG00000011040RPA17965.152ENSETEG00000017608RPA17765.152Echinops_telfairi
ENSOMEG00000011040RPA19958.259ENSEASG00005009372RPA19958.259Equus_asinus_asinus
ENSOMEG00000011040RPA19956.014ENSECAG00000023886RPA19953.110Equus_caballus
ENSOMEG00000011040RPA17362.530ENSEEUG00000002186-6862.530Erinaceus_europaeus
ENSOMEG00000011040RPA19259.108ENSELUG00000006136RPA19959.108Esox_lucius
ENSOMEG00000011040RPA19960.209ENSELUG00000021071rpa19460.209Esox_lucius
ENSOMEG00000011040RPA19957.751ENSFCAG00000006306RPA19953.748Felis_catus
ENSOMEG00000011040RPA19956.432ENSFALG00000006575RPA19853.612Ficedula_albicollis
ENSOMEG00000011040RPA19956.261ENSFDAG00000007720RPA19556.261Fukomys_damarensis
ENSOMEG00000011040RPA19958.020ENSFHEG00000003580rpa19558.020Fundulus_heteroclitus
ENSOMEG00000011040RPA19958.627ENSGMOG00000010382rpa19558.627Gadus_morhua
ENSOMEG00000011040RPA19956.799ENSGALG00000003072RPA19854.106Gallus_gallus
ENSOMEG00000011040RPA19871.497ENSGAFG00000020953RPA19970.615Gambusia_affinis
ENSOMEG00000011040RPA19959.507ENSGAFG00000012916rpa19659.507Gambusia_affinis
ENSOMEG00000011040RPA110057.958ENSGACG00000010856rpa19557.958Gasterosteus_aculeatus
ENSOMEG00000011040RPA19956.803ENSGAGG00000013611RPA19456.803Gopherus_agassizii
ENSOMEG00000011040RPA19957.018ENSGGOG00000014186RPA19457.018Gorilla_gorilla
ENSOMEG00000011040RPA19960.457ENSHBUG00000017773rpa19560.209Haplochromis_burtoni
ENSOMEG00000011040RPA19968.288ENSHBUG00000009348RPA19668.288Haplochromis_burtoni
ENSOMEG00000011040RPA19956.261ENSHGLG00000008846RPA19556.923Heterocephalus_glaber_female
ENSOMEG00000011040RPA19956.261ENSHGLG00100017755-9556.923Heterocephalus_glaber_male
ENSOMEG00000011040RPA19952.405ENSHGLG00100000799-9452.405Heterocephalus_glaber_male
ENSOMEG00000011040RPA19948.527ENSHGLG00100002005-9948.760Heterocephalus_glaber_male
ENSOMEG00000011040RPA19955.556ENSHCOG00000001401rpa19455.749Hippocampus_comes
ENSOMEG00000011040RPA19949.738ENSHCOG00000000351RPA19449.738Hippocampus_comes
ENSOMEG00000011040RPA110059.408ENSIPUG00000004400rpa19559.408Ictalurus_punctatus
ENSOMEG00000011040RPA19556.887ENSSTOG00000022475RPA19456.887Ictidomys_tridecemlineatus
ENSOMEG00000011040RPA110056.089ENSJJAG00000000876Rpa19756.089Jaculus_jaculus
ENSOMEG00000011040RPA19958.031ENSKMAG00000005605rpa19558.448Kryptolebias_marmoratus
ENSOMEG00000011040RPA19974.868ENSKMAG00000000234RPA19673.510Kryptolebias_marmoratus
ENSOMEG00000011040RPA19877.650ENSLBEG00000002281RPA19674.145Labrus_bergylta
ENSOMEG00000011040RPA19958.669ENSLBEG00000021604rpa19558.549Labrus_bergylta
ENSOMEG00000011040RPA18155.889ENSLACG00000007210RPA19455.889Latimeria_chalumnae
ENSOMEG00000011040RPA19961.285ENSLOCG00000006397rpa19561.285Lepisosteus_oculatus
ENSOMEG00000011040RPA19955.312ENSLAFG00000015354RPA19852.730Loxodonta_africana
ENSOMEG00000011040RPA18555.967ENSMFAG00000036138-9854.739Macaca_fascicularis
ENSOMEG00000011040RPA19953.899ENSMMUG00000002442-9453.899Macaca_mulatta
ENSOMEG00000011040RPA19956.261ENSMMUG00000011604-9953.600Macaca_mulatta
ENSOMEG00000011040RPA19955.575ENSMNEG00000031632-9755.575Macaca_nemestrina
ENSOMEG00000011040RPA19951.681ENSMNEG00000029837-8859.804Macaca_nemestrina
ENSOMEG00000011040RPA19952.650ENSMLEG00000038768-9652.650Mandrillus_leucophaeus
ENSOMEG00000011040RPA19958.615ENSMAMG00000017993rpa19958.615Mastacembelus_armatus
ENSOMEG00000011040RPA19869.147ENSMAMG00000020097RPA19967.016Mastacembelus_armatus
ENSOMEG00000011040RPA19960.209ENSMZEG00005007551rpa19957.913Maylandia_zebra
ENSOMEG00000011040RPA19874.225ENSMZEG00005024731RPA19972.126Maylandia_zebra
ENSOMEG00000011040RPA19956.454ENSMGAG00000005315RPA19456.454Meleagris_gallopavo
ENSOMEG00000011040RPA19957.315ENSMAUG00000010474Rpa19757.804Mesocricetus_auratus
ENSOMEG00000011040RPA19957.338ENSMICG00000012867RPA19457.804Microcebus_murinus
ENSOMEG00000011040RPA19956.261ENSMOCG00000013019Rpa19556.261Microtus_ochrogaster
ENSOMEG00000011040RPA19973.322ENSMMOG00000010868RPA19576.513Mola_mola
ENSOMEG00000011040RPA19959.162ENSMMOG00000014292rpa19759.162Mola_mola
ENSOMEG00000011040RPA19957.659ENSMODG00000010549RPA19854.444Monodelphis_domestica
ENSOMEG00000011040RPA19959.331ENSMALG00000011453rpa19558.290Monopterus_albus
ENSOMEG00000011040RPA19976.129ENSMALG00000001208RPA19374.565Monopterus_albus
ENSOMEG00000011040RPA19857.118MGP_CAROLIEiJ_G0016734Rpa19654.876Mus_caroli
ENSOMEG00000011040RPA19856.186ENSMUSG00000000751Rpa19655.041Mus_musculus
ENSOMEG00000011040RPA19956.655MGP_PahariEiJ_G0017871Rpa19556.997Mus_pahari
ENSOMEG00000011040RPA19856.261MGP_SPRETEiJ_G0017577Rpa19654.248Mus_spretus
ENSOMEG00000011040RPA19957.143ENSMPUG00000013119RPA19953.956Mustela_putorius_furo
ENSOMEG00000011040RPA110057.895ENSMLUG00000006113RPA19457.895Myotis_lucifugus
ENSOMEG00000011040RPA19957.509ENSNGAG00000004522Rpa19357.509Nannospalax_galili
ENSOMEG00000011040RPA19974.061ENSNBRG00000009672RPA19274.061Neolamprologus_brichardi
ENSOMEG00000011040RPA19960.816ENSNBRG00000020595rpa19960.816Neolamprologus_brichardi
ENSOMEG00000011040RPA19956.357ENSNLEG00000017149RPA19654.992Nomascus_leucogenys
ENSOMEG00000011040RPA19948.881ENSMEUG00000006714RPA19548.881Notamacropus_eugenii
ENSOMEG00000011040RPA19956.081ENSODEG00000009038RPA19556.081Octodon_degus
ENSOMEG00000011040RPA19958.390ENSONIG00000013135rpa19856.752Oreochromis_niloticus
ENSOMEG00000011040RPA19956.155ENSOANG00000010880RPA19656.324Ornithorhynchus_anatinus
ENSOMEG00000011040RPA19953.583ENSOCUG00000001504RPA19952.469Oryctolagus_cuniculus
ENSOMEG00000011040RPA19960.627ENSORLG00000004856rpa19560.627Oryzias_latipes
ENSOMEG00000011040RPA19882.567ENSORLG00000003368RPA19981.040Oryzias_latipes
ENSOMEG00000011040RPA19960.627ENSORLG00020008980rpa19560.627Oryzias_latipes_hni
ENSOMEG00000011040RPA19881.026ENSORLG00020015284RPA19979.429Oryzias_latipes_hni
ENSOMEG00000011040RPA19884.491ENSORLG00015020383RPA19982.839Oryzias_latipes_hsok
ENSOMEG00000011040RPA19960.627ENSORLG00015013982rpa19560.627Oryzias_latipes_hsok
ENSOMEG00000011040RPA17486.311ENSORLG00015005867-9989.145Oryzias_latipes_hsok
ENSOMEG00000011040RPA19957.778ENSOGAG00000005581-9457.778Otolemur_garnettii
ENSOMEG00000011040RPA19353.516ENSOGAG00000029379-9353.516Otolemur_garnettii
ENSOMEG00000011040RPA110055.746ENSOARG00000014479RPA19954.067Ovis_aries
ENSOMEG00000011040RPA19956.873ENSPPAG00000039680RPA19654.992Pan_paniscus
ENSOMEG00000011040RPA19957.850ENSPPRG00000011807RPA19853.933Panthera_pardus
ENSOMEG00000011040RPA19957.850ENSPTIG00000007898RPA19953.748Panthera_tigris_altaica
ENSOMEG00000011040RPA19956.186ENSPTRG00000008539RPA19654.992Pan_troglodytes
ENSOMEG00000011040RPA19956.089ENSPANG00000024592RPA19953.323Papio_anubis
ENSOMEG00000011040RPA19759.098ENSPKIG00000008053rpa19559.136Paramormyrops_kingsleyae
ENSOMEG00000011040RPA19956.529ENSPSIG00000015617RPA19656.529Pelodiscus_sinensis
ENSOMEG00000011040RPA19968.078ENSPMGG00000000543RPA19968.345Periophthalmus_magnuspinnatus
ENSOMEG00000011040RPA19958.803ENSPMGG00000011589rpa19758.803Periophthalmus_magnuspinnatus
ENSOMEG00000011040RPA19957.118ENSPEMG00000021061Rpa19655.132Peromyscus_maniculatus_bairdii
ENSOMEG00000011040RPA19957.043ENSPCIG00000019049RPA19854.140Phascolarctos_cinereus
ENSOMEG00000011040RPA19959.059ENSPFOG00000003987rpa19559.059Poecilia_formosa
ENSOMEG00000011040RPA19958.448ENSPLAG00000004984rpa19558.448Poecilia_latipinna
ENSOMEG00000011040RPA19772.830ENSPLAG00000008844-9771.910Poecilia_latipinna
ENSOMEG00000011040RPA19772.990ENSPMEG00000003627-9772.142Poecilia_mexicana
ENSOMEG00000011040RPA19959.059ENSPMEG00000020602rpa19959.786Poecilia_mexicana
ENSOMEG00000011040RPA19869.172ENSPREG00000010119RPA110069.410Poecilia_reticulata
ENSOMEG00000011040RPA19751.767ENSPREG00000010174rpa19651.667Poecilia_reticulata
ENSOMEG00000011040RPA19957.804ENSPCOG00000001799RPA19457.804Propithecus_coquereli
ENSOMEG00000011040RPA19956.164ENSPVAG00000002149RPA19654.620Pteropus_vampyrus
ENSOMEG00000011040RPA19874.225ENSPNYG00000024165RPA19972.126Pundamilia_nyererei
ENSOMEG00000011040RPA19960.384ENSPNYG00000016316rpa19961.319Pundamilia_nyererei
ENSOMEG00000011040RPA110053.054ENSPNAG00000008599rpa19653.646Pygocentrus_nattereri
ENSOMEG00000011040RPA19957.346ENSRNOG00000003123Rpa19953.907Rattus_norvegicus
ENSOMEG00000011040RPA19956.089ENSRBIG00000036587RPA19953.481Rhinopithecus_bieti
ENSOMEG00000011040RPA19954.833ENSRROG00000043278RPA19950.316Rhinopithecus_roxellana
ENSOMEG00000011040RPA17435.731YAR007CRFA16935.731Saccharomyces_cerevisiae
ENSOMEG00000011040RPA19657.245ENSSBOG00000030233RPA19756.708Saimiri_boliviensis_boliviensis
ENSOMEG00000011040RPA19957.366ENSSHAG00000007969RPA19754.093Sarcophilus_harrisii
ENSOMEG00000011040RPA110060.069ENSSFOG00015005362rpa19158.278Scleropages_formosus
ENSOMEG00000011040RPA19968.850ENSSMAG00000019746RPA19967.884Scophthalmus_maximus
ENSOMEG00000011040RPA19868.865ENSSDUG00000016358RPA19968.101Seriola_dumerili
ENSOMEG00000011040RPA19960.924ENSSDUG00000011949rpa19460.924Seriola_dumerili
ENSOMEG00000011040RPA19960.177ENSSLDG00000011806rpa19460.177Seriola_lalandi_dorsalis
ENSOMEG00000011040RPA19868.134ENSSLDG00000020784RPA19967.894Seriola_lalandi_dorsalis
ENSOMEG00000011040RPA19171.875ENSSARG00000007506RPA18571.875Sorex_araneus
ENSOMEG00000011040RPA19955.959ENSSPUG00000007223RPA19655.959Sphenodon_punctatus
ENSOMEG00000011040RPA19974.513ENSSPAG00000011165RPA19574.159Stegastes_partitus
ENSOMEG00000011040RPA19959.162ENSSPAG00000009903rpa19459.162Stegastes_partitus
ENSOMEG00000011040RPA110057.968ENSSSCG00000017822RPA19757.094Sus_scrofa
ENSOMEG00000011040RPA19956.454ENSTGUG00000005775RPA19853.312Taeniopygia_guttata
ENSOMEG00000011040RPA19959.155ENSTRUG00000003616rpa19459.155Takifugu_rubripes
ENSOMEG00000011040RPA19974.841ENSTRUG00000000405RPA19974.004Takifugu_rubripes
ENSOMEG00000011040RPA19959.931ENSTNIG00000016199rpa19559.030Tetraodon_nigroviridis
ENSOMEG00000011040RPA17562.673ENSTBEG00000002709RPA17362.673Tupaia_belangeri
ENSOMEG00000011040RPA19956.499ENSTTRG00000001169RPA19554.636Tursiops_truncatus
ENSOMEG00000011040RPA18973.077ENSUAMG00000015676RPA19573.077Ursus_americanus
ENSOMEG00000011040RPA19957.726ENSUMAG00000009328RPA19953.943Ursus_maritimus
ENSOMEG00000011040RPA110055.060ENSVPAG00000009443RPA19555.060Vicugna_pacos
ENSOMEG00000011040RPA19956.432ENSVVUG00000021715RPA19456.432Vulpes_vulpes
ENSOMEG00000011040RPA110057.317ENSXETG00000013538rpa19854.106Xenopus_tropicalis
ENSOMEG00000011040RPA19855.721ENSXCOG00000010068rpa19755.390Xiphophorus_couchianus
ENSOMEG00000011040RPA19971.979ENSXCOG00000009899-9971.979Xiphophorus_couchianus
ENSOMEG00000011040RPA19958.711ENSXMAG00000004102rpa19959.431Xiphophorus_maculatus
ENSOMEG00000011040RPA19979.355ENSXMAG00000010333RPA19476.907Xiphophorus_maculatus

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