EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000011131 (Gene tree)
Gene ID: 112155951
Gene Symbol: hdlbpb
Alias: -
Full Name: vigilin-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 60471 bases
Position: chrNVQA01000020.1:11298873-11359343
Accession: 112155951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	1	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	2	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	3	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	4	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	5	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	6	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	7	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	8	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	9	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	10	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	11	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	12	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	13	14
ENSOMEP00000028183	KH_1	PF00013.29	6.2e-185	14	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	1	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	2	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	3	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	4	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	5	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	6	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	7	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	8	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	9	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	10	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	11	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	12	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	13	14
ENSOMEP00000009777	KH_1	PF00013.29	8.1e-185	14	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	1	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	2	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	3	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	4	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	5	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	6	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	7	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	8	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	9	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	10	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	11	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	12	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	13	14
ENSOMEP00000028191	KH_1	PF00013.29	8.2e-185	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000000102	-	6054	-	ENSOMEP00000028183	1247 (aa)	-	-
ENSOMET00000000201	-	4026	-	ENSOMEP00000009777	1266 (aa)	-	-
ENSOMET00000000053	-	5356	-	ENSOMEP00000028191	1267 (aa)	XP_024143792	UPI000CF80D48

Gene Model

Click here to download ENSOMEG00000011131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000011131's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000011131	hdlbpb	100	68.256	ENSOMEG00000000247	hdlbpa	99	71.733

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000011131	hdlbpb	100	95.584	ENSAPOG00000006904	hdlbpb	100	95.584	Acanthochromis_polyacanthus
ENSOMEG00000011131	hdlbpb	100	90.573	ENSACIG00000016154	hdlbpb	100	90.573	Amphilophus_citrinellus
ENSOMEG00000011131	hdlbpb	100	96.136	ENSAOCG00000004083	hdlbpb	100	96.136	Amphiprion_ocellaris
ENSOMEG00000011131	hdlbpb	100	96.057	ENSAPEG00000012270	hdlbpb	100	96.057	Amphiprion_percula
ENSOMEG00000011131	hdlbpb	100	95.426	ENSATEG00000019877	hdlbpb	100	95.426	Anabas_testudineus
ENSOMEG00000011131	hdlbpb	100	82.084	ENSACAG00000003606	-	100	82.084	Anolis_carolinensis
ENSOMEG00000011131	hdlbpb	100	95.347	ENSACLG00000006618	hdlbpb	100	95.347	Astatotilapia_calliptera
ENSOMEG00000011131	hdlbpb	100	77.008	ENSAMXG00000019946	hdlbpb	100	77.008	Astyanax_mexicanus
ENSOMEG00000011131	hdlbpb	100	94.475	ENSCSEG00000000955	hdlbpb	100	94.475	Cynoglossus_semilaevis
ENSOMEG00000011131	hdlbpb	100	95.347	ENSCVAG00000005345	hdlbpb	100	95.347	Cyprinodon_variegatus
ENSOMEG00000011131	hdlbpb	99	85.391	ENSDARG00000061864	hdlbpb	99	85.387	Danio_rerio
ENSOMEG00000011131	hdlbpb	94	69.231	ENSEBUG00000005304	hdlbpb	96	69.060	Eptatretus_burgeri
ENSOMEG00000011131	hdlbpb	100	77.219	ENSELUG00000019925	hdlbpb	100	78.397	Esox_lucius
ENSOMEG00000011131	hdlbpb	88	34.206	ENSFHEG00000001701	hdlbpb	100	90.063	Fundulus_heteroclitus
ENSOMEG00000011131	hdlbpb	97	87.322	ENSGMOG00000004522	hdlbpb	78	87.322	Gadus_morhua
ENSOMEG00000011131	hdlbpb	100	95.189	ENSGAFG00000005278	hdlbpb	100	95.189	Gambusia_affinis
ENSOMEG00000011131	hdlbpb	99	91.627	ENSGACG00000019361	hdlbpb	100	91.627	Gasterosteus_aculeatus
ENSOMEG00000011131	hdlbpb	100	95.189	ENSHBUG00000018434	hdlbpb	100	95.189	Haplochromis_burtoni
ENSOMEG00000011131	hdlbpb	100	84.148	ENSIPUG00000003291	HDLBP	100	84.468	Ictalurus_punctatus
ENSOMEG00000011131	hdlbpb	100	95.741	ENSKMAG00000016562	hdlbpb	100	95.741	Kryptolebias_marmoratus
ENSOMEG00000011131	hdlbpb	100	94.953	ENSLBEG00000027855	hdlbpb	100	94.953	Labrus_bergylta
ENSOMEG00000011131	hdlbpb	98	85.304	ENSLACG00000007661	hdlbpb	88	85.304	Latimeria_chalumnae
ENSOMEG00000011131	hdlbpb	100	82.650	ENSLOCG00000013909	hdlbpb	100	82.650	Lepisosteus_oculatus
ENSOMEG00000011131	hdlbpb	100	95.505	ENSMAMG00000003035	hdlbpb	100	95.505	Mastacembelus_armatus
ENSOMEG00000011131	hdlbpb	100	95.347	ENSMZEG00005021465	hdlbpb	100	95.347	Maylandia_zebra
ENSOMEG00000011131	hdlbpb	100	93.844	ENSMMOG00000012525	hdlbpb	100	93.844	Mola_mola
ENSOMEG00000011131	hdlbpb	100	93.612	ENSMALG00000008938	hdlbpb	100	93.612	Monopterus_albus
ENSOMEG00000011131	hdlbpb	100	95.426	ENSNBRG00000002236	hdlbpb	100	95.426	Neolamprologus_brichardi
ENSOMEG00000011131	hdlbpb	100	95.268	ENSONIG00000009211	hdlbpb	100	95.426	Oreochromis_niloticus
ENSOMEG00000011131	hdlbpb	100	97.632	ENSORLG00000006581	hdlbpb	100	97.632	Oryzias_latipes
ENSOMEG00000011131	hdlbpb	100	97.632	ENSORLG00020010012	hdlbpb	100	97.632	Oryzias_latipes_hni
ENSOMEG00000011131	hdlbpb	100	97.790	ENSORLG00015006863	hdlbpb	100	97.790	Oryzias_latipes_hsok
ENSOMEG00000011131	hdlbpb	100	87.609	ENSPKIG00000005966	hdlbpb	100	87.766	Paramormyrops_kingsleyae
ENSOMEG00000011131	hdlbpb	88	93.611	ENSPMGG00000019853	hdlbpb	99	93.611	Periophthalmus_magnuspinnatus
ENSOMEG00000011131	hdlbpb	92	63.455	ENSPMAG00000000249	-	99	63.344	Petromyzon_marinus
ENSOMEG00000011131	hdlbpb	95	74.781	ENSPMAG00000002131	hdlbpb	100	74.781	Petromyzon_marinus
ENSOMEG00000011131	hdlbpb	100	94.384	ENSPFOG00000008755	hdlbpb	100	94.384	Poecilia_formosa
ENSOMEG00000011131	hdlbpb	100	95.426	ENSPLAG00000007055	hdlbpb	100	95.426	Poecilia_latipinna
ENSOMEG00000011131	hdlbpb	100	95.347	ENSPMEG00000001952	hdlbpb	100	95.347	Poecilia_mexicana
ENSOMEG00000011131	hdlbpb	100	95.110	ENSPREG00000012848	hdlbpb	100	95.110	Poecilia_reticulata
ENSOMEG00000011131	hdlbpb	100	95.110	ENSPNYG00000022467	hdlbpb	100	95.110	Pundamilia_nyererei
ENSOMEG00000011131	hdlbpb	100	86.661	ENSPNAG00000011104	hdlbpb	100	86.661	Pygocentrus_nattereri
ENSOMEG00000011131	hdlbpb	100	87.214	ENSSFOG00015023199	hdlbpb	100	87.135	Scleropages_formosus
ENSOMEG00000011131	hdlbpb	100	95.032	ENSSMAG00000008790	hdlbpb	100	95.032	Scophthalmus_maximus
ENSOMEG00000011131	hdlbpb	100	95.820	ENSSDUG00000020694	hdlbpb	100	95.820	Seriola_dumerili
ENSOMEG00000011131	hdlbpb	100	95.426	ENSSLDG00000020807	hdlbpb	100	95.426	Seriola_lalandi_dorsalis
ENSOMEG00000011131	hdlbpb	100	82.320	ENSSPUG00000018688	-	100	82.320	Sphenodon_punctatus
ENSOMEG00000011131	hdlbpb	100	95.978	ENSSPAG00000016969	hdlbpb	100	95.978	Stegastes_partitus
ENSOMEG00000011131	hdlbpb	99	91.766	ENSTRUG00000012888	hdlbpb	99	91.766	Takifugu_rubripes
ENSOMEG00000011131	hdlbpb	99	93.280	ENSTNIG00000002555	hdlbpb	100	93.031	Tetraodon_nigroviridis
ENSOMEG00000011131	hdlbpb	100	83.871	ENSXCOG00000001797	hdlbpb	100	83.871	Xiphophorus_couchianus
ENSOMEG00000011131	hdlbpb	100	94.637	ENSXMAG00000015633	hdlbpb	100	94.637	Xiphophorus_maculatus