EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000011545 (Gene tree)
Gene ID: 112159114
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 38205 bases
Position: chrNVQA01000024.1:17848211-17886415
Accession: 112159114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000028454	KH_1	PF00013.29	4.6e-51	1	3
ENSOMEP00000028454	KH_1	PF00013.29	4.6e-51	2	3
ENSOMEP00000028454	KH_1	PF00013.29	4.6e-51	3	3
ENSOMEP00000028454	KH_2	PF07650.17	6.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000017072	-	2686	-	ENSOMEP00000028454	457 (aa)	XP_024148747	UPI000CF7D205

Gene Model

Click here to download ENSOMEG00000011545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000011545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000011545	-	72	61.890	ENSOMEG00000019014	PCBP2	96	61.890
ENSOMEG00000011545	-	51	52.381	ENSOMEG00000010595	hnrpkl	56	52.381
ENSOMEG00000011545	-	69	32.530	ENSOMEG00000007725	-	66	32.530
ENSOMEG00000011545	-	97	55.921	ENSOMEG00000015459	-	99	55.921
ENSOMEG00000011545	-	84	53.869	ENSOMEG00000005759	pcbp2	98	59.475
ENSOMEG00000011545	-	69	32.857	ENSOMEG00000001908	igf2bp2b	63	37.647
ENSOMEG00000011545	-	50	37.209	ENSOMEG00000021943	fubp1	53	37.037
ENSOMEG00000011545	-	54	50.000	ENSOMEG00000023618	hnrnpk	57	50.000
ENSOMEG00000011545	-	71	63.110	ENSOMEG00000020162	-	94	63.110
ENSOMEG00000011545	-	68	36.111	ENSOMEG00000004190	fubp3	76	36.111
ENSOMEG00000011545	-	70	30.070	ENSOMEG00000017916	igf2bp3	65	30.070
ENSOMEG00000011545	-	66	60.328	ENSOMEG00000020811	pcbp3	97	60.328
ENSOMEG00000011545	-	98	70.362	ENSOMEG00000003516	-	96	69.936

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000011545	-	96	57.399	ENSG00000090097	PCBP4	97	75.000	Homo_sapiens
ENSOMEG00000011545	-	100	96.499	ENSAPOG00000009897	-	100	96.499	Acanthochromis_polyacanthus
ENSOMEG00000011545	-	54	86.842	ENSAPOG00000018462	-	67	86.842	Acanthochromis_polyacanthus
ENSOMEG00000011545	-	95	58.124	ENSAMEG00000009211	PCBP4	97	58.770	Ailuropoda_melanoleuca
ENSOMEG00000011545	-	94	96.610	ENSACIG00000020434	-	100	96.610	Amphilophus_citrinellus
ENSOMEG00000011545	-	94	73.934	ENSACIG00000015264	pcbp4	89	75.829	Amphilophus_citrinellus
ENSOMEG00000011545	-	98	92.601	ENSAOCG00000021366	-	100	92.601	Amphiprion_ocellaris
ENSOMEG00000011545	-	94	64.031	ENSAOCG00000006924	-	100	65.051	Amphiprion_ocellaris
ENSOMEG00000011545	-	88	68.305	ENSAPEG00000009555	-	78	85.577	Amphiprion_percula
ENSOMEG00000011545	-	94	76.316	ENSAPEG00000023157	pcbp4	100	76.794	Amphiprion_percula
ENSOMEG00000011545	-	98	90.889	ENSATEG00000006511	-	100	90.889	Anabas_testudineus
ENSOMEG00000011545	-	89	69.734	ENSATEG00000008529	pcbp4	93	69.471	Anabas_testudineus
ENSOMEG00000011545	-	95	63.014	ENSACAG00000011701	PCBP4	97	62.557	Anolis_carolinensis
ENSOMEG00000011545	-	96	57.399	ENSANAG00000023072	PCBP4	99	58.036	Aotus_nancymaae
ENSOMEG00000011545	-	100	96.061	ENSACLG00000025246	-	100	96.061	Astatotilapia_calliptera
ENSOMEG00000011545	-	100	71.372	ENSACLG00000013348	pcbp4	100	71.769	Astatotilapia_calliptera
ENSOMEG00000011545	-	100	81.545	ENSAMXG00000033125	pcbp4	100	81.760	Astyanax_mexicanus
ENSOMEG00000011545	-	95	58.124	ENSBTAG00000018622	PCBP4	97	58.542	Bos_taurus
ENSOMEG00000011545	-	96	57.848	ENSCJAG00000005783	PCBP4	99	58.036	Callithrix_jacchus
ENSOMEG00000011545	-	95	58.124	ENSCAFG00000010019	PCBP4	97	58.770	Canis_familiaris
ENSOMEG00000011545	-	95	58.124	ENSCAFG00020022361	PCBP4	97	58.770	Canis_lupus_dingo
ENSOMEG00000011545	-	95	58.352	ENSCHIG00000012918	PCBP4	97	58.542	Capra_hircus
ENSOMEG00000011545	-	95	58.352	ENSTSYG00000008765	PCBP4	97	58.770	Carlito_syrichta
ENSOMEG00000011545	-	95	57.895	ENSCAPG00000005895	PCBP4	97	58.314	Cavia_aperea
ENSOMEG00000011545	-	95	57.895	ENSCPOG00000014617	PCBP4	97	58.314	Cavia_porcellus
ENSOMEG00000011545	-	96	57.848	ENSCCAG00000033268	PCBP4	99	58.259	Cebus_capucinus
ENSOMEG00000011545	-	96	57.848	ENSCATG00000032034	PCBP4	99	58.259	Cercocebus_atys
ENSOMEG00000011545	-	95	57.895	ENSCLAG00000008356	PCBP4	97	58.542	Chinchilla_lanigera
ENSOMEG00000011545	-	96	57.848	ENSCSAG00000013913	PCBP4	99	58.259	Chlorocebus_sabaeus
ENSOMEG00000011545	-	95	62.329	ENSCPBG00000016554	PCBP4	95	62.329	Chrysemys_picta_bellii
ENSOMEG00000011545	-	96	57.848	ENSCANG00000038865	PCBP4	99	58.259	Colobus_angolensis_palliatus
ENSOMEG00000011545	-	95	58.124	ENSCGRG00001014953	Pcbp4	97	58.542	Cricetulus_griseus_chok1gshd
ENSOMEG00000011545	-	95	58.124	ENSCGRG00000008617	Pcbp4	97	58.542	Cricetulus_griseus_crigri
ENSOMEG00000011545	-	98	84.152	ENSCSEG00000021041	PCBP4	100	84.152	Cynoglossus_semilaevis
ENSOMEG00000011545	-	98	70.146	ENSCSEG00000014487	pcbp4	95	70.772	Cynoglossus_semilaevis
ENSOMEG00000011545	-	94	67.366	ENSCVAG00000003674	pcbp4	98	66.590	Cyprinodon_variegatus
ENSOMEG00000011545	-	100	93.873	ENSCVAG00000013090	-	100	93.873	Cyprinodon_variegatus
ENSOMEG00000011545	-	100	80.430	ENSDARG00000024276	pcbp4	100	81.038	Danio_rerio
ENSOMEG00000011545	-	92	79.167	ENSDNOG00000033951	PCBP4	87	72.289	Dasypus_novemcinctus
ENSOMEG00000011545	-	95	57.895	ENSDORG00000000573	Pcbp4	97	58.314	Dipodomys_ordii
ENSOMEG00000011545	-	63	56.090	ENSETEG00000001778	PCBP4	96	56.090	Echinops_telfairi
ENSOMEG00000011545	-	95	57.895	ENSEASG00005012889	PCBP4	97	58.542	Equus_asinus_asinus
ENSOMEG00000011545	-	95	57.895	ENSECAG00000024218	PCBP4	97	58.542	Equus_caballus
ENSOMEG00000011545	-	100	86.825	ENSELUG00000001870	-	100	86.825	Esox_lucius
ENSOMEG00000011545	-	100	75.523	ENSELUG00000018204	pcbp4	100	75.840	Esox_lucius
ENSOMEG00000011545	-	95	58.124	ENSFCAG00000009148	PCBP4	97	58.770	Felis_catus
ENSOMEG00000011545	-	93	58.372	ENSFALG00000008831	PCBP4	95	58.605	Ficedula_albicollis
ENSOMEG00000011545	-	95	57.666	ENSFDAG00000012692	PCBP4	97	58.087	Fukomys_damarensis
ENSOMEG00000011545	-	94	69.975	ENSFHEG00000002769	-	97	69.975	Fundulus_heteroclitus
ENSOMEG00000011545	-	98	87.277	ENSGMOG00000017799	-	100	87.277	Gadus_morhua
ENSOMEG00000011545	-	95	57.991	ENSGALG00000027695	PCBP4	97	58.447	Gallus_gallus
ENSOMEG00000011545	-	55	87.500	ENSGAFG00000018301	pcbp4	63	88.079	Gambusia_affinis
ENSOMEG00000011545	-	83	93.915	ENSGAFG00000021090	-	78	96.185	Gambusia_affinis
ENSOMEG00000011545	-	98	90.402	ENSGACG00000002664	-	100	91.071	Gasterosteus_aculeatus
ENSOMEG00000011545	-	95	62.785	ENSGAGG00000022116	PCBP4	95	62.785	Gopherus_agassizii
ENSOMEG00000011545	-	96	57.399	ENSGGOG00000012474	PCBP4	99	57.812	Gorilla_gorilla
ENSOMEG00000011545	-	100	95.842	ENSHBUG00000005329	-	100	95.842	Haplochromis_burtoni
ENSOMEG00000011545	-	100	71.173	ENSHBUG00000009472	pcbp4	100	71.571	Haplochromis_burtoni
ENSOMEG00000011545	-	95	58.124	ENSHGLG00000012018	PCBP4	97	58.770	Heterocephalus_glaber_female
ENSOMEG00000011545	-	95	56.591	ENSHGLG00100008748	PCBP4	97	56.787	Heterocephalus_glaber_male
ENSOMEG00000011545	-	100	88.646	ENSHCOG00000010838	-	97	94.904	Hippocampus_comes
ENSOMEG00000011545	-	100	82.391	ENSIPUG00000008212	pcbp4	100	82.391	Ictalurus_punctatus
ENSOMEG00000011545	-	95	56.522	ENSSTOG00000002573	PCBP4	97	56.948	Ictidomys_tridecemlineatus
ENSOMEG00000011545	-	95	58.352	ENSJJAG00000016235	Pcbp4	97	58.542	Jaculus_jaculus
ENSOMEG00000011545	-	100	95.624	ENSKMAG00000017554	-	100	95.624	Kryptolebias_marmoratus
ENSOMEG00000011545	-	98	75.641	ENSKMAG00000014252	pcbp4	96	75.906	Kryptolebias_marmoratus
ENSOMEG00000011545	-	100	94.967	ENSLBEG00000011345	-	100	94.967	Labrus_bergylta
ENSOMEG00000011545	-	100	65.652	ENSLACG00000015899	PCBP4	98	73.276	Latimeria_chalumnae
ENSOMEG00000011545	-	100	79.521	ENSLOCG00000013402	pcbp4	100	80.217	Lepisosteus_oculatus
ENSOMEG00000011545	-	94	55.283	ENSLAFG00000010732	PCBP4	100	55.774	Loxodonta_africana
ENSOMEG00000011545	-	96	57.848	ENSMFAG00000001431	PCBP4	99	58.259	Macaca_fascicularis
ENSOMEG00000011545	-	96	57.848	ENSMMUG00000022205	PCBP4	99	58.259	Macaca_mulatta
ENSOMEG00000011545	-	96	57.848	ENSMNEG00000028553	PCBP4	99	58.259	Macaca_nemestrina
ENSOMEG00000011545	-	96	57.848	ENSMLEG00000027083	PCBP4	99	58.259	Mandrillus_leucophaeus
ENSOMEG00000011545	-	100	71.856	ENSMAMG00000010163	pcbp4	100	71.856	Mastacembelus_armatus
ENSOMEG00000011545	-	100	96.280	ENSMAMG00000011364	-	100	96.280	Mastacembelus_armatus
ENSOMEG00000011545	-	100	71.372	ENSMZEG00005008852	pcbp4	100	71.769	Maylandia_zebra
ENSOMEG00000011545	-	100	96.061	ENSMZEG00005023631	-	100	96.061	Maylandia_zebra
ENSOMEG00000011545	-	64	53.023	ENSMGAG00000003895	-	99	53.023	Meleagris_gallopavo
ENSOMEG00000011545	-	53	73.656	ENSMGAG00000005091	-	85	73.656	Meleagris_gallopavo
ENSOMEG00000011545	-	95	58.124	ENSMAUG00000021064	Pcbp4	97	58.770	Mesocricetus_auratus
ENSOMEG00000011545	-	95	58.352	ENSMICG00000002686	PCBP4	97	58.770	Microcebus_murinus
ENSOMEG00000011545	-	95	58.581	ENSMOCG00000013557	Pcbp4	97	58.998	Microtus_ochrogaster
ENSOMEG00000011545	-	69	61.755	ENSMMOG00000017756	pcbp4	97	61.755	Mola_mola
ENSOMEG00000011545	-	98	89.686	ENSMMOG00000020533	-	100	89.686	Mola_mola
ENSOMEG00000011545	-	95	58.810	ENSMODG00000011790	PCBP4	82	58.581	Monodelphis_domestica
ENSOMEG00000011545	-	91	76.498	ENSMALG00000020318	pcbp4	91	77.189	Monopterus_albus
ENSOMEG00000011545	-	94	95.685	ENSMALG00000022117	-	100	95.418	Monopterus_albus
ENSOMEG00000011545	-	95	58.124	MGP_CAROLIEiJ_G0032623	Pcbp4	89	79.245	Mus_caroli
ENSOMEG00000011545	-	95	58.124	ENSMUSG00000023495	Pcbp4	91	80.741	Mus_musculus
ENSOMEG00000011545	-	95	58.124	MGP_PahariEiJ_G0015491	Pcbp4	89	79.245	Mus_pahari
ENSOMEG00000011545	-	95	58.124	MGP_SPRETEiJ_G0033768	-	89	79.245	Mus_spretus
ENSOMEG00000011545	-	95	58.124	ENSMPUG00000011766	PCBP4	97	58.770	Mustela_putorius_furo
ENSOMEG00000011545	-	95	58.124	ENSNGAG00000013148	Pcbp4	97	58.542	Nannospalax_galili
ENSOMEG00000011545	-	94	62.054	ENSNBRG00000007475	pcbp4	98	62.054	Neolamprologus_brichardi
ENSOMEG00000011545	-	98	92.377	ENSNBRG00000015885	-	100	92.377	Neolamprologus_brichardi
ENSOMEG00000011545	-	96	57.848	ENSNLEG00000007064	PCBP4	99	58.259	Nomascus_leucogenys
ENSOMEG00000011545	-	88	48.780	ENSMEUG00000006917	PCBP4	95	48.775	Notamacropus_eugenii
ENSOMEG00000011545	-	88	51.011	ENSOPRG00000008763	PCBP4	98	51.116	Ochotona_princeps
ENSOMEG00000011545	-	95	57.895	ENSODEG00000018230	PCBP4	97	58.314	Octodon_degus
ENSOMEG00000011545	-	95	57.569	ENSOANG00000014110	PCBP4	94	57.534	Ornithorhynchus_anatinus
ENSOMEG00000011545	-	95	58.581	ENSOCUG00000025336	PCBP4	97	58.770	Oryctolagus_cuniculus
ENSOMEG00000011545	-	98	94.183	ENSORLG00000009899	-	100	94.183	Oryzias_latipes
ENSOMEG00000011545	-	98	72.000	ENSORLG00000003061	pcbp4	96	72.000	Oryzias_latipes
ENSOMEG00000011545	-	100	98.468	ENSORLG00020001183	-	100	98.468	Oryzias_latipes_hni
ENSOMEG00000011545	-	100	98.906	ENSORLG00015017819	-	100	98.906	Oryzias_latipes_hsok
ENSOMEG00000011545	-	98	71.190	ENSORLG00015019262	pcbp4	96	70.981	Oryzias_latipes_hsok
ENSOMEG00000011545	-	95	57.895	ENSOGAG00000032384	PCBP4	97	58.542	Otolemur_garnettii
ENSOMEG00000011545	-	94	56.659	ENSOARG00000006603	PCBP4	100	56.867	Ovis_aries
ENSOMEG00000011545	-	96	57.399	ENSPPAG00000038764	PCBP4	99	58.036	Pan_paniscus
ENSOMEG00000011545	-	95	58.124	ENSPPRG00000006165	PCBP4	97	58.770	Panthera_pardus
ENSOMEG00000011545	-	95	58.124	ENSPTIG00000005401	PCBP4	93	58.770	Panthera_tigris_altaica
ENSOMEG00000011545	-	96	57.399	ENSPTRG00000014983	PCBP4	99	57.812	Pan_troglodytes
ENSOMEG00000011545	-	96	57.848	ENSPANG00000026222	PCBP4	99	58.259	Papio_anubis
ENSOMEG00000011545	-	100	74.017	ENSPKIG00000005487	-	100	74.017	Paramormyrops_kingsleyae
ENSOMEG00000011545	-	100	81.878	ENSPKIG00000010244	pcbp4	100	82.314	Paramormyrops_kingsleyae
ENSOMEG00000011545	-	79	58.649	ENSPSIG00000011286	PCBP4	96	57.622	Pelodiscus_sinensis
ENSOMEG00000011545	-	94	73.571	ENSPMGG00000000063	pcbp4	99	73.571	Periophthalmus_magnuspinnatus
ENSOMEG00000011545	-	98	83.669	ENSPMGG00000022732	-	100	83.893	Periophthalmus_magnuspinnatus
ENSOMEG00000011545	-	95	58.124	ENSPEMG00000009276	Pcbp4	97	58.542	Peromyscus_maniculatus_bairdii
ENSOMEG00000011545	-	95	59.497	ENSPCIG00000018151	PCBP4	93	59.268	Phascolarctos_cinereus
ENSOMEG00000011545	-	100	94.748	ENSPFOG00000002989	-	100	94.748	Poecilia_formosa
ENSOMEG00000011545	-	95	70.759	ENSPFOG00000014474	pcbp4	96	81.028	Poecilia_formosa
ENSOMEG00000011545	-	93	69.713	ENSPLAG00000023316	pcbp4	89	71.018	Poecilia_latipinna
ENSOMEG00000011545	-	89	64.439	ENSPLAG00000011438	-	98	64.439	Poecilia_latipinna
ENSOMEG00000011545	-	60	61.775	ENSPMEG00000012990	pcbp4	100	63.087	Poecilia_mexicana
ENSOMEG00000011545	-	98	85.426	ENSPREG00000017370	-	100	85.426	Poecilia_reticulata
ENSOMEG00000011545	-	69	57.338	ENSPREG00000021498	-	81	57.338	Poecilia_reticulata
ENSOMEG00000011545	-	96	57.848	ENSPPYG00000013822	PCBP4	99	58.036	Pongo_abelii
ENSOMEG00000011545	-	88	52.055	ENSPCAG00000009515	PCBP4	97	52.511	Procavia_capensis
ENSOMEG00000011545	-	95	58.352	ENSPCOG00000027535	PCBP4	97	58.770	Propithecus_coquereli
ENSOMEG00000011545	-	88	49.127	ENSPVAG00000012474	PCBP4	97	48.908	Pteropus_vampyrus
ENSOMEG00000011545	-	94	71.847	ENSPNYG00000019234	pcbp4	100	72.072	Pundamilia_nyererei
ENSOMEG00000011545	-	98	91.928	ENSPNYG00000003098	-	100	91.928	Pundamilia_nyererei
ENSOMEG00000011545	-	100	81.935	ENSPNAG00000025434	pcbp4	100	82.366	Pygocentrus_nattereri
ENSOMEG00000011545	-	95	58.124	ENSRNOG00000012406	Pcbp4	97	58.542	Rattus_norvegicus
ENSOMEG00000011545	-	96	57.848	ENSRBIG00000043793	PCBP4	99	58.259	Rhinopithecus_bieti
ENSOMEG00000011545	-	96	57.848	ENSRROG00000034589	PCBP4	99	58.259	Rhinopithecus_roxellana
ENSOMEG00000011545	-	96	57.848	ENSSBOG00000027029	PCBP4	99	58.259	Saimiri_boliviensis_boliviensis
ENSOMEG00000011545	-	69	58.238	ENSSHAG00000007362	PCBP4	100	58.238	Sarcophilus_harrisii
ENSOMEG00000011545	-	70	81.169	ENSSFOG00015008221	pcbp4	60	81.169	Scleropages_formosus
ENSOMEG00000011545	-	100	74.783	ENSSFOG00015012075	PCBP4	100	74.783	Scleropages_formosus
ENSOMEG00000011545	-	100	94.105	ENSSMAG00000009392	-	99	94.105	Scophthalmus_maximus
ENSOMEG00000011545	-	98	73.684	ENSSMAG00000005827	pcbp4	100	72.366	Scophthalmus_maximus
ENSOMEG00000011545	-	94	75.904	ENSSDUG00000017719	pcbp4	97	75.962	Seriola_dumerili
ENSOMEG00000011545	-	98	93.274	ENSSDUG00000015540	-	100	93.274	Seriola_dumerili
ENSOMEG00000011545	-	58	84.177	ENSSLDG00000024847	-	77	84.177	Seriola_lalandi_dorsalis
ENSOMEG00000011545	-	98	93.274	ENSSLDG00000007851	-	100	93.274	Seriola_lalandi_dorsalis
ENSOMEG00000011545	-	95	57.011	ENSSPUG00000000194	PCBP4	97	57.241	Sphenodon_punctatus
ENSOMEG00000011545	-	100	95.842	ENSSPAG00000003033	-	100	95.842	Stegastes_partitus
ENSOMEG00000011545	-	94	63.472	ENSSPAG00000019058	-	92	63.472	Stegastes_partitus
ENSOMEG00000011545	-	95	58.124	ENSSSCG00000028446	PCBP4	97	58.542	Sus_scrofa
ENSOMEG00000011545	-	70	57.585	ENSTGUG00000006393	PCBP4	96	57.585	Taeniopygia_guttata
ENSOMEG00000011545	-	98	88.565	ENSTRUG00000007426	-	100	88.565	Takifugu_rubripes
ENSOMEG00000011545	-	98	86.130	ENSTNIG00000017887	-	100	86.130	Tetraodon_nigroviridis
ENSOMEG00000011545	-	79	38.971	ENSTBEG00000015770	PCBP4	100	39.706	Tupaia_belangeri
ENSOMEG00000011545	-	69	54.497	ENSTTRG00000001443	PCBP4	83	54.450	Tursiops_truncatus
ENSOMEG00000011545	-	94	54.400	ENSUAMG00000020871	PCBP4	100	54.933	Ursus_americanus
ENSOMEG00000011545	-	86	59.701	ENSUMAG00000021609	PCBP4	93	58.513	Ursus_maritimus
ENSOMEG00000011545	-	95	58.124	ENSVVUG00000026857	PCBP4	97	58.770	Vulpes_vulpes
ENSOMEG00000011545	-	94	83.558	ENSXCOG00000000111	-	100	83.558	Xiphophorus_couchianus
ENSOMEG00000011545	-	84	67.488	ENSXMAG00000022188	-	90	68.719	Xiphophorus_maculatus
ENSOMEG00000011545	-	78	82.222	ENSXMAG00000015709	pcbp4	75	82.222	Xiphophorus_maculatus
ENSOMEG00000011545	-	100	94.311	ENSXMAG00000024530	-	100	94.311	Xiphophorus_maculatus