EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000011669 (Gene tree)
Gene ID: 112157593
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type containing 12D
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 12436 bases
Position: chrNVQA01000023.1:13966003-13978438
Accession: 112157593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000010394	RNase_Zc3h12a	PF11977.8	1.3e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000017215	-	2678	-	ENSOMEP00000010394	539 (aa)	XP_024146178	UPI000CF7C515

Gene Model

Click here to download ENSOMEG00000011669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000011669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000011669	-	53	57.877	ENSOMEG00000005602	si:dkey-206d17.12	51	57.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000011669	-	53	62.284	ENSG00000163874	ZC3H12A	78	59.471	Homo_sapiens
ENSOMEG00000011669	-	56	61.130	ENSAPOG00000001632	-	60	61.130	Acanthochromis_polyacanthus
ENSOMEG00000011669	-	100	65.378	ENSAPOG00000005848	-	96	66.081	Acanthochromis_polyacanthus
ENSOMEG00000011669	-	99	63.103	ENSACIG00000006790	-	92	80.137	Amphilophus_citrinellus
ENSOMEG00000011669	-	72	46.617	ENSACIG00000004135	si:dkey-206d17.12	80	53.043	Amphilophus_citrinellus
ENSOMEG00000011669	-	100	64.675	ENSAOCG00000009106	-	96	65.905	Amphiprion_ocellaris
ENSOMEG00000011669	-	58	54.848	ENSAOCG00000003866	-	87	54.357	Amphiprion_ocellaris
ENSOMEG00000011669	-	100	64.675	ENSAPEG00000004229	-	96	65.905	Amphiprion_percula
ENSOMEG00000011669	-	58	54.848	ENSAPEG00000005727	-	96	42.500	Amphiprion_percula
ENSOMEG00000011669	-	80	44.248	ENSATEG00000006140	si:dkey-206d17.12	87	41.026	Anabas_testudineus
ENSOMEG00000011669	-	59	56.936	ENSATEG00000002260	-	83	58.475	Anabas_testudineus
ENSOMEG00000011669	-	98	63.904	ENSATEG00000013053	-	82	83.929	Anabas_testudineus
ENSOMEG00000011669	-	54	59.406	ENSACAG00000017285	ZC3H12A	92	41.667	Anolis_carolinensis
ENSOMEG00000011669	-	53	61.824	ENSANAG00000009908	ZC3H12A	78	59.471	Aotus_nancymaae
ENSOMEG00000011669	-	99	64.437	ENSACLG00000018534	-	94	64.789	Astatotilapia_calliptera
ENSOMEG00000011669	-	98	51.060	ENSAMXG00000030754	-	54	73.422	Astyanax_mexicanus
ENSOMEG00000011669	-	53	62.284	ENSBTAG00000011316	ZC3H12A	50	62.284	Bos_taurus
ENSOMEG00000011669	-	53	60.738	ENSCAFG00000003304	ZC3H12A	51	60.738	Canis_familiaris
ENSOMEG00000011669	-	53	60.738	ENSCAFG00020008620	ZC3H12A	51	60.738	Canis_lupus_dingo
ENSOMEG00000011669	-	53	62.630	ENSCHIG00000021957	ZC3H12A	50	62.630	Capra_hircus
ENSOMEG00000011669	-	53	63.194	ENSCAPG00000015365	ZC3H12A	52	63.194	Cavia_aperea
ENSOMEG00000011669	-	53	62.847	ENSCPOG00000011081	ZC3H12A	52	62.847	Cavia_porcellus
ENSOMEG00000011669	-	53	62.245	ENSCATG00000037700	ZC3H12A	78	59.471	Cercocebus_atys
ENSOMEG00000011669	-	53	62.245	ENSCANG00000042287	ZC3H12A	78	59.471	Colobus_angolensis_palliatus
ENSOMEG00000011669	-	98	40.140	ENSCSEG00000019043	zc3h12a	94	39.410	Cynoglossus_semilaevis
ENSOMEG00000011669	-	58	54.896	ENSCSEG00000010073	-	80	54.357	Cynoglossus_semilaevis
ENSOMEG00000011669	-	98	62.409	ENSCVAG00000001077	-	83	86.547	Cyprinodon_variegatus
ENSOMEG00000011669	-	52	60.351	ENSDARG00000005271	zc3h12a	78	60.616	Danio_rerio
ENSOMEG00000011669	-	53	61.565	ENSDORG00000012666	Zc3h12a	90	42.226	Dipodomys_ordii
ENSOMEG00000011669	-	53	49.310	ENSETEG00000018311	ZC3H12A	59	49.310	Echinops_telfairi
ENSOMEG00000011669	-	57	58.491	ENSEASG00005012220	ZC3H12A	50	61.724	Equus_asinus_asinus
ENSOMEG00000011669	-	52	59.044	ENSEEUG00000005907	ZC3H12A	52	62.782	Erinaceus_europaeus
ENSOMEG00000011669	-	96	51.438	ENSELUG00000018728	-	75	77.978	Esox_lucius
ENSOMEG00000011669	-	56	56.656	ENSFHEG00000021225	-	82	46.203	Fundulus_heteroclitus
ENSOMEG00000011669	-	99	60.071	ENSFHEG00000011425	-	99	60.217	Fundulus_heteroclitus
ENSOMEG00000011669	-	53	56.081	ENSFHEG00000001174	si:dkey-206d17.12	50	55.705	Fundulus_heteroclitus
ENSOMEG00000011669	-	54	53.741	ENSGMOG00000017603	si:dkey-206d17.12	62	52.508	Gadus_morhua
ENSOMEG00000011669	-	53	55.442	ENSGMOG00000007388	-	54	54.515	Gadus_morhua
ENSOMEG00000011669	-	53	65.385	ENSGMOG00000014437	-	92	65.385	Gadus_morhua
ENSOMEG00000011669	-	99	62.390	ENSGAFG00000009523	-	99	62.321	Gambusia_affinis
ENSOMEG00000011669	-	52	54.110	ENSGAFG00000019001	si:dkey-206d17.12	52	54.110	Gambusia_affinis
ENSOMEG00000011669	-	53	55.782	ENSGACG00000002341	si:dkey-206d17.12	54	55.782	Gasterosteus_aculeatus
ENSOMEG00000011669	-	98	40.451	ENSGACG00000013859	zc3h12a	50	57.966	Gasterosteus_aculeatus
ENSOMEG00000011669	-	58	81.587	ENSGACG00000006636	-	94	84.459	Gasterosteus_aculeatus
ENSOMEG00000011669	-	99	64.437	ENSHBUG00000021584	-	88	84.211	Haplochromis_burtoni
ENSOMEG00000011669	-	54	51.656	ENSHCOG00000004255	si:dkey-206d17.12	92	48.101	Hippocampus_comes
ENSOMEG00000011669	-	70	51.852	ENSHCOG00000008878	-	59	45.062	Hippocampus_comes
ENSOMEG00000011669	-	99	50.530	ENSIPUG00000011663	-	99	50.987	Ictalurus_punctatus
ENSOMEG00000011669	-	99	62.684	ENSKMAG00000014401	-	99	62.316	Kryptolebias_marmoratus
ENSOMEG00000011669	-	97	36.870	ENSLBEG00000017593	si:dkey-206d17.12	50	50.680	Labrus_bergylta
ENSOMEG00000011669	-	58	55.927	ENSLBEG00000012554	-	81	46.622	Labrus_bergylta
ENSOMEG00000011669	-	100	59.930	ENSLBEG00000012121	-	100	59.756	Labrus_bergylta
ENSOMEG00000011669	-	56	63.279	ENSLACG00000017365	ZC3H12A	51	63.279	Latimeria_chalumnae
ENSOMEG00000011669	-	73	50.585	ENSLOCG00000003232	si:dkey-206d17.12	50	60.191	Lepisosteus_oculatus
ENSOMEG00000011669	-	53	62.245	ENSMFAG00000032647	ZC3H12A	78	59.471	Macaca_fascicularis
ENSOMEG00000011669	-	53	62.245	ENSMNEG00000040453	ZC3H12A	78	59.471	Macaca_nemestrina
ENSOMEG00000011669	-	53	62.245	ENSMLEG00000034570	ZC3H12A	78	59.471	Mandrillus_leucophaeus
ENSOMEG00000011669	-	58	55.090	ENSMAMG00000021794	-	93	47.771	Mastacembelus_armatus
ENSOMEG00000011669	-	100	62.674	ENSMAMG00000004463	-	86	85.841	Mastacembelus_armatus
ENSOMEG00000011669	-	99	64.437	ENSMZEG00005015555	-	94	64.789	Maylandia_zebra
ENSOMEG00000011669	-	70	52.551	ENSMZEG00005019137	-	89	46.711	Maylandia_zebra
ENSOMEG00000011669	-	99	43.501	ENSMGAG00000003371	ZC3H12A	96	43.783	Meleagris_gallopavo
ENSOMEG00000011669	-	53	62.414	ENSMICG00000004790	ZC3H12A	91	41.986	Microcebus_murinus
ENSOMEG00000011669	-	99	62.610	ENSMMOG00000014855	-	88	81.938	Mola_mola
ENSOMEG00000011669	-	57	53.125	ENSMMOG00000013604	si:dkey-206d17.12	52	55.631	Mola_mola
ENSOMEG00000011669	-	97	40.526	ENSMMOG00000000727	zc3h12a	95	40.526	Mola_mola
ENSOMEG00000011669	-	58	55.821	ENSMMOG00000005728	-	88	44.025	Mola_mola
ENSOMEG00000011669	-	99	61.812	ENSMALG00000018908	-	99	61.279	Monopterus_albus
ENSOMEG00000011669	-	54	53.311	ENSMALG00000012794	si:dkey-206d17.12	50	53.311	Monopterus_albus
ENSOMEG00000011669	-	53	63.605	MGP_SPRETEiJ_G0027441	Zc3h12a	82	59.829	Mus_spretus
ENSOMEG00000011669	-	53	62.284	ENSMPUG00000014758	ZC3H12A	50	61.905	Mustela_putorius_furo
ENSOMEG00000011669	-	99	63.652	ENSNBRG00000010961	-	86	84.444	Neolamprologus_brichardi
ENSOMEG00000011669	-	69	50.262	ENSNBRG00000012175	-	89	46.980	Neolamprologus_brichardi
ENSOMEG00000011669	-	97	34.477	ENSMEUG00000003389	ZC3H12A	99	34.168	Notamacropus_eugenii
ENSOMEG00000011669	-	53	55.892	ENSONIG00000013685	si:dkey-206d17.12	53	55.892	Oreochromis_niloticus
ENSOMEG00000011669	-	96	41.852	ENSONIG00000016235	zc3h12a	53	58.163	Oreochromis_niloticus
ENSOMEG00000011669	-	53	63.542	ENSOCUG00000010856	ZC3H12A	74	63.542	Oryctolagus_cuniculus
ENSOMEG00000011669	-	100	85.451	ENSORLG00000015280	-	100	85.635	Oryzias_latipes
ENSOMEG00000011669	-	99	85.075	ENSORLG00020008580	-	87	85.451	Oryzias_latipes_hni
ENSOMEG00000011669	-	53	55.822	ENSORLG00020016107	-	51	55.822	Oryzias_latipes_hni
ENSOMEG00000011669	-	99	85.448	ENSORLG00015003680	-	87	85.820	Oryzias_latipes_hsok
ENSOMEG00000011669	-	53	56.164	ENSORLG00015007634	ZC3H12A	51	56.164	Oryzias_latipes_hsok
ENSOMEG00000011669	-	59	57.273	ENSOARG00000019760	ZC3H12A	67	62.284	Ovis_aries
ENSOMEG00000011669	-	53	62.284	ENSPPAG00000041054	ZC3H12A	78	59.471	Pan_paniscus
ENSOMEG00000011669	-	53	62.284	ENSPTIG00000012943	ZC3H12A	80	59.375	Panthera_tigris_altaica
ENSOMEG00000011669	-	53	62.284	ENSPTRG00000000544	ZC3H12A	78	59.471	Pan_troglodytes
ENSOMEG00000011669	-	53	62.245	ENSPANG00000011821	ZC3H12A	78	59.471	Papio_anubis
ENSOMEG00000011669	-	98	49.047	ENSPKIG00000019720	-	99	48.700	Paramormyrops_kingsleyae
ENSOMEG00000011669	-	98	42.808	ENSPSIG00000009198	ZC3H12A	54	60.772	Pelodiscus_sinensis
ENSOMEG00000011669	-	97	40.575	ENSPMGG00000009790	-	53	57.931	Periophthalmus_magnuspinnatus
ENSOMEG00000011669	-	54	55.776	ENSPMGG00000004114	zc3h12a	53	55.776	Periophthalmus_magnuspinnatus
ENSOMEG00000011669	-	79	40.260	ENSPMGG00000015418	-	92	39.783	Periophthalmus_magnuspinnatus
ENSOMEG00000011669	-	99	61.879	ENSPFOG00000004135	-	99	61.982	Poecilia_formosa
ENSOMEG00000011669	-	99	61.744	ENSPLAG00000001211	-	99	61.733	Poecilia_latipinna
ENSOMEG00000011669	-	51	54.895	ENSPMEG00000011188	si:dkey-206d17.12	52	54.452	Poecilia_mexicana
ENSOMEG00000011669	-	100	60.069	ENSPREG00000020369	-	96	60.141	Poecilia_reticulata
ENSOMEG00000011669	-	66	54.447	ENSPREG00000001607	-	73	58.442	Poecilia_reticulata
ENSOMEG00000011669	-	53	61.905	ENSPCOG00000015837	ZC3H12A	91	41.349	Propithecus_coquereli
ENSOMEG00000011669	-	99	64.437	ENSPNYG00000010663	-	94	64.789	Pundamilia_nyererei
ENSOMEG00000011669	-	99	50.085	ENSPNAG00000012124	-	53	73.139	Pygocentrus_nattereri
ENSOMEG00000011669	-	97	41.301	ENSPNAG00000010952	si:dkey-206d17.12	87	41.301	Pygocentrus_nattereri
ENSOMEG00000011669	-	53	61.824	ENSRBIG00000042237	ZC3H12A	51	62.245	Rhinopithecus_bieti
ENSOMEG00000011669	-	53	62.245	ENSRROG00000037444	ZC3H12A	78	59.471	Rhinopithecus_roxellana
ENSOMEG00000011669	-	88	43.625	ENSSFOG00015005925	zc3h12a	57	64.535	Scleropages_formosus
ENSOMEG00000011669	-	53	59.933	ENSSMAG00000005140	zc3h12a	94	41.227	Scophthalmus_maximus
ENSOMEG00000011669	-	99	62.976	ENSSMAG00000017632	-	99	62.045	Scophthalmus_maximus
ENSOMEG00000011669	-	100	65.088	ENSSDUG00000010581	-	90	84.058	Seriola_dumerili
ENSOMEG00000011669	-	56	57.325	ENSSDUG00000013237	-	89	50.000	Seriola_dumerili
ENSOMEG00000011669	-	100	65.317	ENSSLDG00000022022	-	95	64.613	Seriola_lalandi_dorsalis
ENSOMEG00000011669	-	99	40.989	ENSSPUG00000003668	ZC3H12A	86	40.887	Sphenodon_punctatus
ENSOMEG00000011669	-	100	67.140	ENSSPAG00000022537	-	94	66.548	Stegastes_partitus
ENSOMEG00000011669	-	55	54.426	ENSSPAG00000020938	si:dkey-206d17.12	55	54.426	Stegastes_partitus
ENSOMEG00000011669	-	53	62.457	ENSSSCG00000037815	ZC3H12A	50	62.457	Sus_scrofa
ENSOMEG00000011669	-	98	38.671	ENSTRUG00000010565	si:dkey-206d17.12	51	53.618	Takifugu_rubripes
ENSOMEG00000011669	-	53	55.944	ENSTNIG00000001274	si:dkey-206d17.12	54	56.446	Tetraodon_nigroviridis
ENSOMEG00000011669	-	53	62.976	ENSUMAG00000001122	ZC3H12A	50	62.245	Ursus_maritimus
ENSOMEG00000011669	-	53	60.738	ENSVVUG00000023171	ZC3H12A	51	60.738	Vulpes_vulpes
ENSOMEG00000011669	-	64	53.409	ENSXETG00000011465	zc3h12a	56	58.521	Xenopus_tropicalis
ENSOMEG00000011669	-	99	60.877	ENSXCOG00000001538	-	89	81.250	Xiphophorus_couchianus
ENSOMEG00000011669	-	58	54.601	ENSXCOG00000008984	zc3h12a	92	44.444	Xiphophorus_couchianus
ENSOMEG00000011669	-	99	60.839	ENSXMAG00000005023	-	89	81.250	Xiphophorus_maculatus
ENSOMEG00000011669	-	70	52.430	ENSXMAG00000014715	-	83	59.292	Xiphophorus_maculatus
ENSOMEG00000011669	-	52	54.110	ENSXMAG00000025043	si:dkey-206d17.12	52	54.110	Xiphophorus_maculatus